Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC46                                                --------->ANAC46                                                <---------ALFIN1                                              <---------ALFIN1                                     <-                                          <---------MYB59                                   ------>NtERF2                                          <---------MYB111(1)                              --------->RAP2.3(2)                                          <---------MYB111(2)                              --------->RAP2.3(3)                                        ------>MYB46(1)                                    --------->DEAR3(1)                         --------->RAP2.6(2)------>MYB83                                  --------->ATERF1(1)                         --------->DEAR3(1) ------>MYB46(1)                 ------>ZmHOX2a(1)<------NtERF2                        --------->MYB46(3)--------->MYB46(3)            <---------ALFIN1  --------->RAP2.3(1)              <---------MYB52(1)        -------->P--------->ANAC46     ------>MYB46(1)   --------->LBD16            ----------->GT1             ------>MYB83--------->LBD16    -------->P        <---------ATERF1(1)            --------->LBD16            ------>ZmHOX2a(1)               ------>MYB83      ------>NtERF2        <---------ARR14(2)          ------>ZmHOX2a(1)                ------->GAMYB      --------->ANAC46        <---------SPL7  --------->DEAR3(2)<---------MYB46(2)        --------->MYB46(3)  --------->DEAR3(1)       <---------DEAR3(2)------->GAMYB<---------MYB111(2)         <-----------GT1     ------>ZmHOX2a(1)   cataatcgacggtccggttaactcaaaccgcctcgctcctcctaccaaacacaccgcaatcttcgacttaaccaactcctccctcttcctccgccgtcga  28613600                                         ----------->HVH21                    <---------YAB1                                       --------->At4g35610           <-------GAMYB                                      <---------ARR14(2)           <---------ANAC46                                      --------->GLK1(2)          ------------>AtMYB77                                      ------->TEIL    --------->At5g28300<---------TOE1(3) <------MYB46(1)                              <---------TOE1(3)      ----------->GT1<---------MYB46(3)     <------MYB83                    --------->MYB52(1)--------->ARR14(2)        ----------->TGA1          <---------TOE2(3)         ------>ZmHOX2a(1) <---------MYB52(1)       <---------DEAR3(1)<---------MYB52(1)  --------->MYB59 ----------GT1      <---------DOF5.7(2)<---------At4g35610      ----------->HVH21  <---------ZAT14   ttttccatctcctccgcttggataacgtcgttagggttcgaatctgacaattcgacggtgaaatcggtgacggttagggtatgagtgtagattaggttac  28613700                                                                                        <------ZmHOX2a(1)                       <------ZmHOX2a(2)                                                =============                      --------->ARR11(3)                            --------->CCA1(2)================                     <------ZmHOX2a(1)   ---------->DOF2   --------->ALFIN1          <------ZmHOX2a(1)          <---------ZAT6  <---------ANAC55(2)             <------ZmHOX2a(1)   <---------YAB1 --------->ALFIN1---------->DOF2   --------->CCA1(2)    --------->ALFIN1   --------->ICU4   gaagaggggctagagttggaaaaggatcaagtgagagagatgagaaagagattaagacgaggagggtgagagatgggattatgagaaggaggagaagacg  28613800                                        --------->RAP2.3(1)                                        <------NtERF2                                       <---------RAP2.6(1)                                       <---------ERF1              --------->GLK1(2)        <---------ORA47(2)             <---------GLK1(2)         <---------ATERF1(1)             --------->ARR14(2)       <---------RAP2.3(3)             <---------ARR14(2)       <---------RAP2.3(2)            --------->GLK1(1)         <---------DEAR3(1)                           --------->LBD16            --------->HSFB2a(1)     <---------RAP2.3(1)                           --------->DEAR3(1)           ----------->ARR10 ------->TEIL<---------ANAC46                         <---------ANAC46  <          <------NtERF2      <-------TEIL<---------ANAC58                      --------->DEAR3(1)   -        <---------DEAR3(1)----------->GT1<---------ANAC58                      <---------ALFIN1    <-      <-----------HVH21  --------------->AtSPL3                                --------->AtMYB61   --     --------->TGA1a------>ZmHOX2a(1) <---------RRTF1(3)                      --------->MYB46(3)   --     --------->O2   --------->LBD16 ------->GAMYB                           =========================     =======================================MYC_MYB--------->YAB1           ------->GAMYB          --     <---------TGA1a<---------HSFB2a(2)<---------RAP2.3(1)                  --------->AtMYB61      --     <---------O2 <---------LBD16--------->MYB52(1)------>ZmHOX2a(2)     <-----------GT1           -- <------ZmHOX2a(2)----------->RAV1(2)<---------ABI4(1)       --------->GLK1(2)<---------MYB55(2)   <- ==========================HOX2a_HOX2a--------->DEAR3(1) --------->TOE2(3)  --------->ANAC46       -- =======HOX2a_HOX2a --------->HSFB2a(2)------>NtERF2     --------->TOE1(3) --------->MYB46(3)    <--- =======HOX2a_HOX2a<---------LBD16--------->RAP2.6(3)   --------->ZAT6 <---------KAN4(2)    <--------   acgatcgacgtcggagattctcctggaaacgtacataacggcggcgtaagtgatcgtaaccctaatctgtgagaataaccaccaccgtggattgttcaca  28613900 -------MYC3 ------>MYC3                                                                                        < --------TGA1a                                                                                      < ------->ANAC58                                                                         <-------GAMYB ------->TGA1a                                                                         --------->MYB111(2) ========MYC_MYB                                                                       <---------MYB46(3) ------->O2                                                                            --------->MYB52(2) ------->ANAC58                                                                        --------->MYB55(2) ------->ANAC55(1)   <---------GLK1(2)                                                 <-----------RAV1(1) --------O2          --------->ARR11(3)                                            <---------MYB46(3) ------->ANAC46      <---------ARR11(3)                                          <------NtERF2 ------ ------ALFIN1       <---------RVE1(1)     <---------YAB1                       <---------DEAR3(1)   - -ZAT18     ------>NtERF2       <---------AHL20(2)                          --------->ALFIN1 <-------   cacgtttcatttgccgagagagagatttttgtatttatagagttttgattttcttcaaaacttttgaagtgattcggagaggcgctggtttgttggagtg  28614000                             <<<<<<<<<MYB2                           <------MYB83                           <------MYB46(1)                      *TSS--------->MYB59                    --------->ALFIN1                   ------->MYC3                   <-------MYC3                                     <---------ARR11(3)                  <---------ANAC58                                 --------->RVE1(1)                  <---------ANAC58                                 --------->CCA1(1)                <---------ANAC58                            --------->CCA1(2) ------MYB83    <---------ANAC46                  --------->HSFB2a(2)                              <- ------MYB46(1) <---------ANAC58                  --------->HSFC1(1)--------->ARR11(3)             <- --->ALFIN1     <---------ANAC55(2)       <----------DOF2  --------->ARR11(3)                     --- ---------->GT1 --------->ANAC55(2)    <-----------GT1     <---------ARR11(3) <---------AGP1    ----- --ANAC46  <---------ICU4 <---------AtMYB61       <---------HSFB2a(2)       ------->TEIL       <-----   gaaggtgaaatcaacattacgcgtgggtttggttttcgttttctcttttcttctagagagagatatgaaatatctatgtagctctgtataaaaccgatgc  28614100                  ------->TEIL                  --------->ARR14(2)                  <---------ARR14(2)               --------->ANAC46       <---------AHL20(2)      <---------AHL20(2)      --------->AHL20(2)      --------->YAB1       <---------ANAC55(2)                                                    <--  --------->AHL20(2)       --------->ANAC55(2)                                                 <-----  <---------AHL20(2)       <---------ANAC58                                                    ------  --------->AHL20(1)       <---------ANAC55(1)                                                 ------  <---------AHL20(1) <---------AHL20(2)                                                 ----------->GT1 -------HAHB4  --------->ANAC55(1)                                     --------->ANAC55(2)    ------- --------ICU4  --------->ANAC55(2)   --------->DAG2      <----------DOF2     <----------DOF2  <------ ------>ICU4   <---------ANAC55(2)  ---------->DOF2   <-----------GT1<-----------GT1 <---------ANAC58 ---->YAB1    <-------TEIL <---------ANAC58    <---------YAB1      <-----------GT1   <---------ANAC58 --TEIL--------->AHL20(2)  <---------ANAC46 --------->ICU4    ---------->ID1 --------------------->WRI1   ataattaattaaaatatacgtatttgattacgttttcaaaaaggaaatgatcaatgttacttttgtttttttcacgtttctttgtttgcttagtaaataa  28614200      --------->ATHB12    ------->TEIL <---------YAB1 -------AHL20(2)                                --------->ZAT6 ----AHL20(2)                               <-------GAMYB --->AHL20(2)                              ------>ZmHOX2a(2) --->AHL20(1)                              <---------MYB46(3)     <-----------GT1 -->AHL20(2)        ----------->GT1 --------->ZAT18    <---------ICU4   --------->ZAT14          <--- ---AHL20(2)     <----------DOF2    <---------ZAT18   <---------ATHB12  <---------ZAT14--------------   tttatgaatgtttgaaatactttggtgaatagttttagtgctcgatcgttacagtaatcaattcgaataaactcttcactaaatatgctcgttacagtct  28614300                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                       --------->SPL7                                                                                       ------->TEIL                                                                                     <---------SPL7                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                   --------------->AtSPL3                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                        <---------GLK1(1)  --------->ZAT18               <---------MYB52(1)                       --------->ARR11(3)         <---------------AtSPL8       --------->YAB1      <---------ATHB12             --------->AHL20(1)     ---------->DOF2  ----- ------REM1(2)<-----------HVH21  <---------ANAC46      --------->YAB1   <---------CCA1(2)  --------->WRKY38(1) --------->TaNAC69(2)   <---------ALFIN1             ----------->GT1<---------WOX13(1) <-------TEIL--   tcacgtttattgtaactgttagacccccactcattgtgtattaggggatgttgacaagtatattgaagagattgatatcttgaaaggcgtacgtggacta  28614400                                                                                                   --                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                               ---------->DOF2        --------->CCA1(2)                           ---------->DOF2      <---------------AGL15                --------->ARR11(1)                        --------->ANAC58        --------------->AGL15                <---------ARR14(2)                        --------->ANAC58        =====================================================                  <---------ANAC58   <---------DAG2       ---------->DOF2            --------->ARR11(3) ------>GT1       <-------GAMYB      <----------DOF2   <----------ID1                --------->ARR14(2) -------->DOF2    <---------ANAC58<-----------GT1   ---------->DOF2                  <---------ARR11(3)   gtaaagaaatggatagtttgggttgcaagaaaagttttactttttgtattcaacaaaaggaaaagaaaagtattttttgttatccaagatatgactttat  28614500  Previous    Next  AGI:  At1g76250.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO62018.1) Range:  from: 28611344    to: 28614022    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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