Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ----------->GT1                                      <---------ARR14(2)                                   <---------------AGL15                                  ----------------->AGL3                                  <-----------------AGL2                                  <-----------------AGL3                                --------->ARR14(2)                                                <--                                <---------ARR14(2)                                             ------                             --------->ANAC58                                                  ------                             --------->ANAC58                                                  ------                      <-------GAMYB--------------->AGL15                                 <------ZmHOX2a(1)                  ------------>AtMYB77--------->ARR14(2)                                 ============   gggatgagaaaacaatacagagacagttagaacggaactgtatatggtaatacaaatattccgaattgaggcgaaaactgggccttagctaggaaacaag  28604900                   <---------At4g35610                --------->At4g35610                <---------ZAT14          --------->ARR11(3)          <---------ARR11(3)  --------->ARR11(3)    <---------ALFIN1        <---------YAB1                          ----------->GT1           <------ -------GLK1(2) --------->ZAT14                                    <---------ZAT6          <---------MYB46(3) --->ANAC58     <---------At4g35610                            <---------YAB1             <---------WOX13(1) --->ANAC46 ------>ZmHOX2a(2)--------->YAB1                <----------DOF2             <---------YAB1 --->ANAC58<---------GLK1(1)--------->ICU4             <---------RAP2.6(2)           <---------At4g35610 ==================HOX2a_HOX2a<---------ARR11(3)      <---------At4g35610        <----------DOF2    -   gaatctccacatgatctctgcagcaacttcatgatcatctctgcatcgttcttgatagcggctttattagtggtaacaacattcttttgctgattgttac  28605000                      <---------ANAC58           <---------ANAC58                      <---------ANAC55(2)        <---------ANAC46                      <---------ANAC58           <---------ANAC58                      <---------ANAC46      <---------AtLEC2                      <---------ANAC55(1)   <---------ANAC58            <---------ICU4                  <---------ANAC46            --------->YAB1                  <---------ANAC58           --------->ICU4              --------->MYB52(2)           <---------YAB1              <---------MYB46(3)        <---------ATHB12            <---------ARR14(2)  --------->ANAC58    --------->ANAC55(2)  <---------MYB46(3)  --------->ANAC58  <-----------GT1 --------->ARR14(2) --------->DAG2     --------->MYB52(1)<-------TEIL                                          <-------- -----GT1--------->YAB1 --------->ALFIN1 <---------MYB52(1)         <----------DOF2   <---------At4g35610 --------->DOF2   <---------MYB52(2)<---------GLK1(2)      <----------DOF2           ------->TEIL   caaaaagccagtcatcatcaaataacgtgttgaatccagattcgttgcttggcttatacttctttctattctttgattcacaaattgcatcttcccttat  28605100                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   --                                 --------->ANAC46                                                  --                                 --------->ANAC58                                               -----                                 <---------ANAC55(2)                                         <-------                                 --------->ANAC58                                 --------->At4g35610                                 --------->ANAC55(2)                              <---------At4g35610                      --------->At4g35610  <<<<<<<<<TBF1                          ----------->RAV1(2)                    --------->YAB1  ------->TEIL <-----------HVH21             <-------TEIL  <------- -DAG2       <---------YAB1      --------->ANAC55(1)                       <---------YAB1    <-------   cgtcttcttactgctatgactagcatcagacaaacacgcatcttcttcttctgtcaaacaactcttctcaagttgttctgattcatctgaaacttgcttg  28605200      <---------ICU4     --------->ICU4 ------MYB83 ------MYB46(1)                                                                                   --- ---------->GT1     <---------ARR14(2)     --------->HSFB2a(2)  <----------DOF2                   --- ------->MYB59      --------->ARR14(2)     <---------HSFB2a(2)---------->ID1                      <-- ------->MYB46(2)<---------ANAC46      <----------DOF2  --------->ATHB12                          <-- ---->ATHB12     <---------ANAC58     <---------DAG2   <---------YAB1                             <-- --ANAC58        <---------ANAC58   ------->TEIL       --------->ICU4                             --- --ANAC58     <----------DOF2      <-----------GT1--------->ANAC58                    <---------YAB1 --ANAC46   ------>ZmHOX2a(1)  <-------GAMYB      --------->ANAC58             ---------->DOF2   <---   tttggtaaatattcctctttcgtattctcttcccgttgtacctttttagaagaagccatgatttgtctttccatcttcgacaaaagttctgactgaatcg  28605300                     --------->ANAC58                     --------->ANAC58            <------ZmHOX2a(2)           --------->ARR11(3)          --------->At4g35610 ---->TEIL<---------At4g35610 ------>GLK1(2)     --------->SPL7 ---------ARR10<---------ANAC46 -------ARR11(1) --------->ANAC58 -------ARR14(2) --------->ANAC46 ------>ARR14(2) --------->ANAC58----------->GT1   <------ZmHOX2a(2)                          <------ ------ARR14(1)<---------ANAC55(2)  *TSS          <---------ARR11(3)               --------->YAB1  <-   aatctaggtttcagatcacgcgtaagacacctctattgttatatcgacgagagatcaaatcagcgagtttttgttgagaatgtaatggtaagacttctgt  28605400                                                ----------->GT1                                             <---------ANAC46                                             --------->ALFIN1                      --------->YAB1       --------->ALFIN1                <----------DOF2            <---------ANAC46             <---------ARR11(3)         <---------ANAC46             --------->ARR11(3)         <---------DEAR3(1)            <------MYB83               <---------ABI4(1)            <------MYB46(1)          --------->ALFIN1           <---------AtMYB61         ----------->HVH21           --------->MYB59       ----------->RAV1(2)                                            <----        <-------GAMYB <---------AHL20(2)<---------DREB2C(2)                                 <-------- ---ANAC46 --------->MYB46(2)   -------->P<------NtERF2                                     --------- --------ARR14(2)   <-----------TBP<-----------RAV1(1)    ----------->RAV1(1)        <---------MYB59   ggatagtgagggttaggtctttatttataagacttacctgtggcggtgtggggataaatgcgacatttgcattgggctaaaaatgggcctacttataaat  28605500                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                <---------GLK1(1)                                                               <---------ARR14(2)       --------->YAB1                                          --------->ARR14(2)   <------NtERF2                                              <------ZmHOX2a(1) -----ICU4 --------->DAG2                                   <---------TOE2(3)                     <-- -YAB1<---------ATHB12                                 --------->ATHB12     <---------LBD16       --- >AHL20(2)---------->DOF2   ---------->DOF2     ----------->HVH21   <---------ANAC58         <-------   atggccgaatcataaggcccattttttagggaaagtgttcaataacatgggtgacattgatttaggaactgcgtgttgttcggaagtttttaaaacacgg  28605600                                            ------->TEIL                                       --------->YAB1                                  --------->ANAC46                                       <---------ICU4                                  --------->ANAC58                            <---------MYB52(1)                ---------->DOF2          --------->ANAC58              <---------ANAC46  <----------DOF2       <---------ZAT18             <---------TCP15(1)              <---------ANAC58 <---------ANAC58       <---------ZAT14             --------->PCF2 --------ARF1 ----------->GT1  <---------ANAC46       --------->ZAT18        ---------->DOF2 -------->HVH21         ------->TEIL  <---------ATHB12--------->ZAT14<----------DOF2 <---------ALFIN1 --LBD16      <---------ANAC58 <---------ANAC58<---------AHL20(2) <------ZmHOX2a(1) <------NtERF2   gggacatgtagttaaggcgtgaaatgaaccgttgcttttaatcatgtatatacttgtgcactaaaaaaggactttgatataaaggccccacgaagtttta  28605700                     ----------->GT1                 --------->ANAC46               --------->ANAC58               --------->ANAC58             ----------->RAV1(1)           --------->SPL7               --------->ZAT6        <---------ANAC58  --------->REM1(1)        <---------ANAC58<-----------GT1--------->ZAT18                          ---------->DOF2       <-------TEIL---------->DOF2     <---------ZAT18                       ----------->RAV1(1)       <---------------AtSPL3      <---------HSFB2a(2)                   -------->P       --------------->AtSPL3 <----------DOF2                           <-----------GT1       --------------->AtSPL8 <---------DAG2                       <---------ANAC46 --------->YAB1--------->ANAC46    --------->HSFB2a(2)   <---------TOE2(3) ------->GAMYB       <-----   tattcaaaattcgtaccacacaaaagttacaacttttttagaacactactcaaaaatttaagtttggcttcgtctaaccccacaaagttttaaaactgtg  28605800  Previous    Next  AGI:  At1g76230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20100.1) Range:  from: 28604654    to: 28605336    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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