Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ---------->DOF2                =====================================================================================                <---------------AGL15                --------------->AGL15             --------->ARR14(2)             --------->ARR11(3)                                                                <-----             <---------ARR14(2)                                                         --------->ATHB12       --------->TOE2(3)             --------->ICU4                                  <---------ANAC58   <---------MYB111(1)      --------->DAG2    <---------YAB1                         <---------ANAC58 -->ZAT18    <---------ARR11(3) ----------->GT1                                 <---------ANAC58   -- -ZAT18<----------DOF2     ---------->DOF2  <---------ZAT6   <---------AtMYB61  <---------ANAC58 <---   ctgcaactactttagtatcttgttaaagaaaaagtggtaatagttagtattatttgtaatgttatggtctgtcaatacactagcttagcttgatttgatt  28596700                          --------->ETT(2)                   --------->ARR11(3)             --------->YAB1            <---------ATHB12            --------->ICU4<---------ETT(2)        --------------->AGL15        <---------------AGL15                                 --------->YAB1       ----------------->AG                                --------->YAB1       ----------------->AGL3                            <---------YAB1 =======================MADS_MADS                       --------->TOE2(3)                         <-- ----WOX13(1)<---------ICU4     ----------->GT1       <-------TEIL                               <--- ------->TOE2(3) ----------->ARR10         <----------DOF2 <---------ICU4                       ----- --------GT1<---------ATHB51<---------REM1(2)    ---------->DOF2    --------->YAB1              <----   aacttaatttccaaataatgagatactgtctacatggtgatatagctttgtcaaagttcattaatgacaatgacaaaaacaagtgtgttagtaaccaaga  28596800                                           ---------->DOF2     <---------CCA1(1)                                        --------->YAB1         <---------RVE1(1)                                     <---------ICU4           <---------ARR11(3)                                    --------->ICU4            --------->ARR11(3)                                    --------->AHL20(2)<---------ARR11(3)                         <---                                    <---------ATHB51  --------->GLK1(2)            <---------MYB59          ---------->ID1            <---------AHL20(2)--------->ARR11(3)          --------->ANAC55(2) -------ICU4                   ----------->GT1   ----------->GT1             --------------->AtSPL8 ------YAB1--------->YAB1     ----------->GT1   <------ZmHOX2a(2)    <---------HSFB2a(2)        ----- ---->ARR11(3)                --------->ANAC58 <---------ARR11(3)    --------->HSFB2a(2)        <---- -----ARR11(3)                --------->ANAC58 --------->ARR11(3)<-----------TBP  <---------ANAC55(2)   taattgcatttagtcgtaattcatgttttgaaacggaaataattagaaagatcgaaaatctctagatatttgtagaaggtcagtacataactccacgagt  28596900                                                           --------->HSFB2a(1)                                                       --------->ANAC58      --------->ANAC46                                                   --------->ANAC58          --------->ANAC58                                                   --------->ANAC58          --------->ANAC58                                            <<<<<<<<<ARR2  <---------HSFB2a(1)                             --------->ANAC58    ---------->DOF2             <---------ALFIN1    <---      ------------>CBF       ------------------------>ANAC81               <---------ALFIN1      <---      ------>ZmHOX2a(2)      --------->ANAC58--------->AHL20(2) <----------DOF2--------->ANAC46 ----- ------MYB46(3)            ---------->DOF2--------->WOX13(1)    ------>ZmHOX2a(1)     <---------ARR14(2) ---->ALFIN1   --------->ZAT18          ------------>CBF  ------->TEIL--------->ANAC46--------->ARR14(2) -----AtMYB61  <---------ZAT18    <---------MYB52(2)   --------->ANAC58  <---------ALFIN1     <------   ggtcgtgatccaatttgtggacaaatttgaaaagcaactaaaaacaatcaaataagcacgaacatccttttccctccacacacatcaaaatccacagttt  28597000                                                                           ------->GAMYB                                                                          --------->ANAC58                                                                          <---------MYB52(2)                                                                          --------->ANAC58                                                                         <---------------------WRI1                                                                        --------->MYB52(1)                                                                     --------->ANAC55(2)                                                                     --------->ANAC58                                             <---------TOE2(3)       --------->ANAC55(1)      <------------CBF                       <---------TOE1(3)       --------->ANAC46    <---------ARR11(3)                 <---------AHL20(2)       <-----------------------TaNAC69(2)    --------->ARR11(3)          --------->MYB59                 <-------TEIL   <---------CCA1(2)          --------->ARR14(2)               --------->CCA1(2)    ---------->DOF2 ---MYB46(1)   ----------->TBP<---------MYB52(1)   <---------ANAC58  --------->ANAC58 ---MYB83      --------->AHL20(2)      --------->AHL20(2)     --------->ARR14(2)   --------->YAB1 ---->MYB59    <---------AHL20(2)     --------->AHL20(2)      <---------ARR14(2)  <---------YAB1 ---MYB52(1) ----------->TBP  <---------ARR14(2)   <---------ANAC58  <---------ANAC55(2)   ggtccatatattgctatatatatagagaagcagttaggcatttaattaaggttgcatacagacagatacatacgcaacgaaactatcaaagccgaagtaa  28597100                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                  ---                                                                                                  ---                                                                                                  <--            --------->YAB1                                                                 <---------ZAT14         --------->YAB1                                                                    --------->ZAT14   --------->ANAC46                                                                   --------->ZAT18   --------->ANAC58                                                                   <---------ZAT18   --------->ANAC58              ---------->DOF2                                 ---------->DOF2  <--   cacacacacaaaaatcatatgaagaaactaaattctaaagggattagactctccgaattgatggagaaatggagaagaaggaagaaagggcacttcgctg  28597200         --------->MYB52(1)   --------->ANAC58           --------->ATHB12   --------->ANAC46          <---------YAB1   --------->ANAC58         >>>>>>>>>>>>>>>>>LFY -------->ZAT18            <-----------GT1 ---------REM1(2)    <-------TEIL ---------ZAT14     --------->GLK1(2) ------>REM1(2)     --------->ARR14(1) ------>ZAT14      <---------GLK1(2)                    ----------->HVH21 -------ZAT14    ----------->ARR10             --------->YAB1<---------At4g35610   <------ZmHOX2a(1) -------ZAT18  ----------->ARR10        --------->At4g35610<-----------RAV1(2)   <---------TOE2(3) <-   tgtacacgaacgaagggaagagattcgttttaccattggattatctgaatcatccgatgttacaggtgctattgcaaatggctgaggatgagtttgggac  28597300                                                                                             <-------                                                                                          <---------YAB1                                                                                        --------->YAB1                                                                                     --------->YAB1                                                                                     <---------ICU4                                                                                    <---------YAB1                                                          <---------ANAC58          --------->ICU4                                                          <---------ANAC58        <---------ICU4                                                        <---------YAB1            --------->YAB1                                                      <---------ICU4             <---------YAB1                       <---------ANAC58              <---------YAB1              --------->ICU4------                       <---------ANAC58            --------->YAB1                <---------ATHB12            <----------DOF2                     --------->bZIP60(1)             <---------TOE1(2)            ------>ZmHOX2a(1)                   <---------bZIP60(1)        <-----------HVH21 <-------    --------->YAB1     <---------ANAC46      ===============================HOX2a_HOX2a--------->ICU4 --------YAB1   ---------->DOF2              <------ZmHOX2a(2)       <------ZmHOX2a(1) <---------YAB1   taccattgatggtcctttaaaagttccttgcgatggaagtttaatggatcacatcatcatgcttgtgagaaggagcatgtcccatgattatgatgatgtg  28597400                                                                                        -------------                    ------->PIF5                                                       --------------                    <-------PIF5                                                       --------------                   ----------->RAV1(2)                           <---------ZAT2        --------------                   --------->At4g35610                           <---------At4g35610   ==============                 <---------ALFIN1                                --------->ZAT2        --------------                <---------At4g35610                   --------->ETT(2)             <---------MYB59                --------->At4g35610                <---------ANAC58        --------->ICU4 --ANAC46  ------->PIF5       <---------At4g35610  <---------ANAC58      --------->ATHB12           - --->ALFIN1<-------PIF5       --------->At4g35610  <---------ANAC46     <---------ATHB12<------------ --bZIP60(2) --------->At4g35610                <----------DOF2  --------->At4g35610------>ZmHOX2a(1)   gagaagtcttccacgagcagcacctgcaagggagcttcaatctcttctctctttcgtggacagagccagcttcagtcattagtttcctaaccatttggag  28597500                                                                     --------->ATHB12                                                                     <---------AHL20(2)                                                                     <---------ICU4                                                                     -------->ATHB1                                                                    <---------YAB1                                                                    <---------ATHB51                                                                    --------->ICU4        <----------DOF2                                          --------->AHL20(2)        <---------DAG2                                           <---------AHL20(2)        --------------->AGL15                                    --------->AHL20(1)        <---------------AGL15                                   <---------AHL20(2)     <-----------GT1                                            --------->AHL20(2) -->AGL15                                                    --------->AHL20(1) --->AG<-----------------AGL3                          ----------->GT1  --------->YAB1             -- --->AGL3                                          --------->ARR11(3)-------->HAHB4                <- --->AGL2                                     ------>MYB46(1)--------->AHL20(2)                   <-- =======================MADS_MADS             -------->P     <---------AHL20(2)                 ----- --->AGL1                            <---------ANAC46------>ZmHOX2a(2) <---------YAB1 --------->YAB1 -------->ICU4           <---------MYB46(3)   ------>MYB83   <---------AHL20(1) ------->TEIL   <----- ---AGL15               <--------P <---------ANAC46<---------ARR11(3)--------->ATHB51<---------ATHB12   taattgttaactttttttggagaagggttgttctattttgtgtataccaacatgatcttgtaataaattaattattgtaatgtatcaatgatacagtatc  28597600  Previous    Next  AGI:  At1g76190.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G20470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47487.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 28597119    to: 28597490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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