Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-   --------->ARR11(3)                                                                            <---   <---------ARR11(3)                                                                            <---  --------->RVE1(1)                                                                        <---------  <---------GLK1(1)                                   <---------YAB1                      --------->ANAC58  --------->GLK1(1)                                 --------------->AGL15                 --------->ANAC58 <---------ARR11(3)                                 <---------------AGL15   <---------ZAT6--------->ANAC46 --------->ARR11(3)                         <------ZmHOX2a(2)          <---------GLK1(2) ------->TEIL   tgagatatctgaacaaagttttctgaaaaacgtagaatacatatggatcaaatactataattcgaaagtttcagattagtgctaagtaatgaacgtcatg  28594800                                                                ------>ZmHOX2a(1)                                                                <---------YAB1                                                                <---------------AGL15                               --------->ABI4(1)                --------------->AGL15   ---------->ID1              ------>NtERF2                   --------->TOE2(3)     --------->KAN4(1) --------->MYB52(2)           --------->DEAR3(1)        <---------RVE1(1)            <---------KAN4(1) <---------MYB46(3)          --------->MYB46(3)        <---------ARR11(3)           ---------->TaMYB80 --------MYB52(1)           <---------At5g28300    <---------ANAC58                 <---------KAN4(2) ------ANAC58              <-----------GT1         <---------ANAC58               <------ZmHOX2a(1) ------ANAC58         <----------DOF2      <----------DOF2  <-----------GT1   <---------ATHB12     <- --HVH21           --------------------->WRI1      <---------ANAC46       <---------WRKY38(1)--------   cgtttgttcttctgtcgatttcttctttttcaccgcccgtctgagttttatgggcgtgatattttccttattgtggtcaaatcaggaatattcaacaata  28594900             <---------ANAC58             <---------ANAC58             ------->TEIL              <---------TOE2(3)         <---------DAG2          --------->WOX13(1)             <----------DOF2  --------->ZAT6     <---------PCF2<---------ATHB12       <----------DOF2                           < ----------GT1      ----------->HVH21   <-------TEIL   <-----------GT1                              - ->YAB1  <----------DOF2      --------->GLK1(2)    <---------AHL20(2)                             ---   tttagcactcgctttacttggtgggacatgagaatcaatcgatgcatcgctgttttatttctttttctttgatgtttctatttctgttagaacaaagttt  28595000         ---------->DOF2     --------->TOE2(3)                                                            ---------->DOF2   <---------YAB1            <---------At4g35610                               --------->At5g28300  <---------GLK1(2)          --------->At4g35610                              ----------->GT1 ---------YAB1               <------NtERF2                                    ------->GAMYB -------->ICU4    <<<<<<<<<SARD1                     <---------YAB1        --------->MYB52(1) ------>YAB1      <<<<<<<<<CBP60g                  --------->YAB1   ---------->DOF2               ---   tcatgattcttaaaagcccaaatttcatggcatcggaacaaagttttcatatatgatgacaactcaaaacaaaagagtaacggtaaaagcccaataccca  28595100                                    --------->ARR14(2)                          ------>ZmHOX2a(2) <-------GAMYB               --------->SPL7                         <------ZmHOX2a(2) --------->MYB52(2)           <-------TEIL                        <---------ARR14(2) --------->MYB55(2)         <---------SPL7                        <---------AGP1     <---------MYB46(3)        <---------HSFB2a(1)                        --------->ARR14(2) --------->MYB111(2)       --------->HSFB2a(1)                       <---------ARR14(1) <---------MYB55(1)    --------->ANAC58          <---------ARR14(2)                       <---------CCA1(2)  <--------P            --------->ANAC46          --------->ARR14(2)                     ------>ZmHOX2a(2)   <-------GAMYB          --------->AtLEC2          --------->GLK1(2)                    <------ZmHOX2a(2)    <---------MYB52(1)     --------->ANAC55(1)       ------->TEIL                   <---------ARR14(2)   --------->LBD16         --------->ANAC58     --------->MYB52(1)             --------->ARR14(2)     <---------ARR14(2)         <---------LBD16 <---------GLK1(1)             <---------ARR14(2)   --------->ANAC46           --------->ZAT18   --------->GLK1(1)<----             --------->GLK1(2)    ----------->HVH21          <---------ZAT18--------->DEAR3(1) ------ ------>AHL20(2)   --------->ARR14(2) <---------LBD16        <---------WRKY38(1)    ------>ZmHOX2a(1)   taaaatgggcttaagaatccagatcggatctataacccgacccggttgttgacaccgagagagtccacgcaacgttcgccgaattcctaacgaatcggac  28595200           --------->At5g28300       <---------DEAR3(1)                    --------->ARR11(3)                                     -      ---------->ID1                         --------->ARR14(2)              --------->GLK1(2)      <    <---------ANAC58                         <---------GLK1(2)              <---------GLK1(2)       <    <---------ANAC58                         <---------ARR14(2)          <---------HSFB2a(2)     <--- <---------MYB52(1)                     <-----------GT1                  --------->HSFB2a(2)<------MYB83 -----ALFIN1       *TSS          <-----------GT1                     <---------GLK1(1)      <------MYB46(1) --->SPL7 ----------->GT1       <-----------GT1       <-----------GT1--------->GLK1(1)  <-----------RAV1(1)   accgtttcgtcgctgtaaaattttgatgcgaaattttccaattcacagattttgtttttccattgttttggatttctagattctagttatatgttggtga  28595300               <---------ANAC55(2)          --------->REM1(1)        ------>ZmHOX2a(1)     <-----------GT1 -------->ARR11(3)                                --------->ARR14(2)                               <- ---------GLK1(2)                --------------------->WRI1     ------>ZmHOX2a(2)                 <-- ---------ARR11(3) <---------GLK1(2)              <---------ARR14(2)                     --------->YAB1 ------WOX13(1)--------->ANAC55(2)    <---------At4g35610   ----------->HVH21           <---------YAB1   tagatttttcctacatctcgtgattctcaaacgcttcttgagctcttcgtcgaatcgggactgtgatcgggacttggtggagaagaagcgatgataacaa  28595400                   <---------LBD16                   <-----------RAV1(2)   <---------ARR14(2)                                 --------->ATERF1(1)   ------->TEIL --------->ZAT2                   <---------WOX13(1)   --------->GLK1(2)                           --------->ATHB12   <---------ARR11(1)                         <---------YAB1                <---------ALFIN1      ---   --------->ARR14(2)    ---------->TaMYB80   --------->ICU4    <----------DOF2                ======  <---------ARR14(1) --------->LBD16        --------->YAB1      --------------------->WRI1     ------ -----ZmHOX2a(2)--------->At4g35610     ---------->DOF2      <---------ARR11(1)                ====== -------ARR11(3)<---------At4g35610   <------ZmHOX2a(2)     <---------MYB52(1) --------->AtMYB61 <---   gatcgaatctagcagaacagctcagggaatatcagattagatcaaagcatgattgggcctccgtttctttcttctcttccacctccaatttctcttcctc  28595500                      ------>ZmHOX2a(1)           <---------LBD16         ====================HOX2a_HOX2a         ------>ZmHOX2a(2)        =====================HOX2a_HOX2a        <------ZmHOX2a(2)        <---------GLK1(1)        --------->GLK1(1)       <---------ARR14(2)                              <---------ZAT18       --------->ARR14(2)                             <---------ANAC46       --------->ARR14(3)                             <---------ANAC58       --------->ARR11(3)                             <---------ANAC58       <---------ARR11(3)                            <-------TEIL      <---------GLK1(1)                           --------->At4g35610 ------>LBD16--------->LBD16                      <---------ZAT2                                ----- ==============HOX2a_HOX2a           <---------At4g35610                                        <---- >ZmHOX2a(1) ------>NtERF2     <---------AHL20(2) --------->ZAT2                               ------ ===============HOX2a_HOX2a<----------DOF2        <---------At4g35610                       --------- --------RAV1(2)      <----------DOF2--------->At4g35610                             <----------DOF2   caggttagagatctccggcttatcctttcctttttaatctgctgtgatttggagctgcgtgcttagagttgtatttgaaaaattgtactttgtgatattt  28595600                                                                                          <----------            --------->At5g28300                        <---------ARR11(3)        --------->YAB1           --------->TOE1(3)                           --------->ARR11(3)  --------->ANAC58           --------->TOE2(3)                          <---------GLK1(1)    --------->ANAC58 <--------           ----------->GT1                 --------->WRKY12                --------->ANAC46 <-------- ---->AHL20(2)                          <---------ANAC46             ------>ZmHOX2a(1)--------->ICU4 -----AHL20(2)                          <---------MYB46(3)       <---------ARR14(2) --------->YAB1 --->AHL20(2)<---------MYB52(1)<---------TOE2(3)--------->TOE1(2)--------->ARR14(2)<---------YAB1 >ICU4  --------->ARR14(2)<----------DOF2<-------GAMYB--------->GLK1(1)--------->ANAC46<---------ICU4   aattcaattggaaccgtaaatttctcatcttttaagggattgtcgttgaacattggatatctatgtgaatcctacacaaggaactataattttgacttgt  28595700  Previous    Next  AGI:  At1g76185.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20460.1); similar to unknown [Brassica juncea] (GB:ABO71663.1) Range:  from: 28595219    to: 28596412    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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