Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->HSFB2a(1)                                                                            ---------->DOF2                                                                      <---------At5g28300  --------->MYB52(2)                           <---------YAB1                    --------->AHL20(2)        <---------HSFB2a(1)                 <-----------GT1                     <---------YAB1  <-----------GT1  --------->DAG2 -->GLK1(1)    --------->AHL20(2)       <---------TOE2(3)----------->GT1  <---------YAB1  <-------TEIL   caatatcaaatatcgaattaaactgtattatgaaatcagatttagatttagaatgaagattgaaaaaatagttaccatgaaagaaggaaaggttcgtcga  28585600                                                                     --------->WRKY38(1)                                                                 <------NtERF2                                                             --------->ANAC58                                                             --------->ANAC58                                                           ---------->DOF2                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                       --------->LBD16              ---------->DOF2                                                       --------->HSFB2a(2)        --------->ANAC46                                     ------->GAMYB     <---------HSFB2a(2)       --------->TOE2(3)                                  --------->MYB52(1)  <---------LBD16--------->WRKY12             ---                                  <-----------GT1   --------->PCF5 <-------GAMYB ----------------->AG                          <---------YAB1           <-----------HVH21<---------MYB52(1)   --------->LBD16               <---------YAB1  --------->YAB1   ----------------->AGL1           ----------------->AGL1               --------->ICU4--------->ICU4 ------->TEIL--------->LBD16  --------->YAB1<---------LBD16   ggctattgtagacgttgatgatgagattgtcattagtaaccgaatgaatgtccggtcccggaaacgccccgttgatcaaaataccctaaaccggaaaatg  28585700                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          <---------ARR11(3)                          <---------ARR11(1)                          <---------AGP1                          --------->AGP1                          <---------ARR14(2)                 --------->YAB1                      --------->AHL20(2)      <-------TEIL        --------->ARR14(2)     --------->AHL20(2)     <------ZmHOX2a(2)   <---------ARR14(1)      <---------AHL20(1)    --------->ARR11(3)   <---------CCA1(2)       --------->AHL20(1)    <---------ARR11(3)  --------->LBD16          <---------AHL20(2)                       <------MYB46(1)    --------->AGP1    <---------LBD16      --------->LBD16                                -----------   <---------GLK1(1) --------->MYB52(1)   <---------LBD16                   <------NtERF2<---------MYB46(3)   --------->GLK1(1)<-----------GT1      <---------LBD16     --------->GLK1(1)          --------->ALFIN1 ------->DOF2   <---------AHL20(2) --------->ANAC46  <---------AHL20(2)<-----------RAV1(1)<------MYB83   caaagagatccatagtttttaataaccggatctataaacgaaaaccgggaataaattaaactgatatcgatacctgttggcgaacaccgagtgggtatat  28585800                                                                                        --------->RAP2.3(1)                                                                                        --------->ATERF1(1)                                                                                       <---------DEAR4(2)                                                                                       <---------ORA47(2)                                                                                       <---------ATERF1(1)                                                                                       <---------RAP2.3(1)                                                    <---------------------WRI1         ------>NtERF2                                                   ------>NtERF2                       <---------ERF1                                                  <---------RAP2.3(3)                 <---------ATERF1(2)                                                  <---------RAP2.6(2)                 <---------RAP2.3(2)                                                  <---------DEAR3(1)                  <---------DEAR3(1)                                               ----------->TGA1                       --------->DEAR3(1)                                               ----------->HVH21                      <---------ANAC46                                              <-----------HVH21                       <---------RAP2.3(3)                                             <---------ANAC58                         --------->ATERF1(2)                                      ------>ZmHOX2a(2)                              ------>NtERF2                                     --------->GLK1(1)                               <---------ABI4(1)                                    <---------ARR14(2)                               --------->ATERF1(1)                                    --------->ARR14(2)                               <------NtERF2                                    <---------ARR11(3)                              <---------RRTF1(1)                                    ------->TEIL  <---------ANAC46                  <---------ATERF1(1)                                    <-----------ARR10                               <---------RAP2.3(1)                                    --------->ARR11(3)                              <---------DEAR4(2)                                --------->SPL1(2)--------->RAP2.6(3)               <---------RAP2.6(2)                               <---------SPL1(1)--------->REM1(2)                  <---------DEAR3(1)                               --------->SPL1(1)--------->MYB52(1)                 <---------RAP2.3(2)                              <---------SPL7 <---------O2                          <---------RRTF1(3)                            <---------------AtSPL3--------->ATERF1(2)              <---------RRTF1(2)                          --------->GLK1(2)--------->At4g35610                     <---------RAP2.3(3)                          <---------ARR14(2) <---------TGA1a                      <---------LBD16    <---------MYB52(1)    --------->ARR14(2) <---------ANAC58                    <-----------RAV1(1)   <---------SPL7 --------->AtLEC2 <---------CCA1(2)<------NtERF2       --------->At4g35610   --------->At5g28300   <---------GLK1(2) <---------At4g35610          <---------At4g35610         - >GT1           <---------------AGL15<------ZmHOX2a(2)                 <---------TOE1(1)<------NtERF2   atcgccgtaagttatgttccattcaaagaatctgtacggatcttcagccgtgacggcgaagagaagagagagtccgatgaataatgcggcggcgaatgag  28585900                                                       --------->ALFIN1                                                     <---------bZIP60(2)                                                     <---------ANAC46              <---------ANAC46                 <---------ARR14(2)          --------->ICU4                  ----------->GT1      <------NtERF2                    ---------->DOF2 <------NtERF2      ------>NtERF2                  --------->ANAC58<---------ANAC58     --------->ANAC58                --------->ANAC58<---------ANAC58                             <--     --------->ANAC46       ----------->GT1    --------->ARR14(2)                             -------     --------->ANAC58       --------->LBD16    --------->ARR11(3)             --------->ANAC46------- -------->ATERF1(1)      --------->MYB52(1)   <---------CCA1(2)          --------->ZAT6       <------   gcactgcccgccatttttgtgtatgaaaaccggtgaaacaagaaaggtatatctggcgtggtctctctctctctaactctaagacacagatttaagtgta  28586000                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                <----                                                                                                =====                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                              <------                            <---------AHL20(2)                                                <------                           *TSS                                                               <------                      --------->ANAC58                                                        <------                      --------->ANAC55(2)                                                     <------                      <---------ANAC55(2)                                                     -------                      --------->ANAC55(1)                                                  <---------                      --------->ANAC58                                                <-----------HVH21 -------ZAT6       <------NtERF2                                                  =================== -->ZAT14         <---------DEAR3(2)                                              ---------->DOF2 --- -->REM1(2)      <---------DEAR3(1)                          ------------------------>ANAC81<-------- ---ZAT14   ----------->ARR10 ---------->DOF2     --------->CCA1(2)    <---------------------WRI1<---   gagtttatgtagagaagagtcggcacgtattaaaaagagtagagagagagagatttaagagaaaacgaataagagagaagaaaacaaaggtcagtgtcgg  28586100         ==============================bZIP_DOF      --------->MYB46(3)      --------->TOE1(2)     --------->DEAR3(2)    <---------TCP15(1)    <---------TCP20    --------->PCF2 ---------ANAC58 ---------ANAC58 -----NtERF2 --->NtERF2 -------MYB46(3) -----MYB52(1) ==================MYC_MYB ---GAMYB--------->TGA1a ----MYB46(3) ----DEAR3(2) ---DEAR3(1)                                                --------->O2 ---DREB2C(2)                                          --------->ANAC58 ---DEAR4(1)                                           --------->ANAC58 ---At1g77200                                          --------->ANAC46 ---ANAC46                                       --------->SPL7     --------->ANAC46 -->ETT(1)------->PIF5        <XXXXXXXXXXXXXXXXXXXXMIR2112-5P------->MYC3 --RAV1(1)<-------PIF5  <---------ZAT14        <---------SPL7<-------MYC3 ==================bZIP_DOF <----------DOF2   <---------ANAC58      --------->ANAC58 ------>MYB55(2)        --------->ZAT18       <---------ANAC58      --------->ANAC58 <---------AHL20(2) ---HVH21<---------TGA1a<---------ZAT18      ---------->ID1 <---------O2        <------NtERF2 ------DEAR3(1) --------->GLK1(2)<---------GLK1(1)   <---------ALFIN1          ------>NtERF2   tggctggacccacgagcgactctgtgttcactttgaaatctgtatttgtcgtcccacaatccacatggctaagcaacttggtgccattttttttatgagc  28586200                                                                                          <----------                      --------->MYB52(1)                                              --------->ARR11(3)                     --------->TOE1(2)                                                <---------ARR11(3)                    --------->MYB46(3)                                              <---------TOE2(3)                    <---------MYB52(2)                  --------->CCA1(2)      --------->ATHB12              --------->YAB1              --------->CCA1(2)                   <---------YAB1          --------->AHL20(2)       <---------REM1(1)   --------->ARR11(3)     <---------AHL20(2)          <---------YAB1         <------MYB46(1)       <---------ARR11(3)   <---------RVE1(1)          <---------AHL20(2)     <---------ANAC46      --------->AHL20(1)   <---------CCA1(1)    ----         <---------AHL20(2)      <------MYB83          <---------AHL20(1)  <---------ARR11(3)   <----         --------->AHL20(2) --------->AHL20(2) <----------DOF2             --------->ARR11(3)   -----   cctaaaaacattttaattagaaacaaacgattatttggtgtaagataagctttgtaagatattggattacaatctcagatattattgagatattacaaga  28586300                 <------MYB46(1)                 <------MYB83           --------->AHL20(2)           --------->AHL20(1)           <---------AHL20(2)          --------->AHL20(2)      --------->AHL20(2)    <---------YAB1                                                                <---------ICU4   --------->TOE2(3)       <-----------GT1                                     --------->YAB1 <---------YAB1 --------->MYB46(2)                                      --------->AHL20(2) -GT1--------->AHL20(2)   --------->AHL20(2) ----------->TGA1       <---------AHL20(2) ----->CCA1(2)  --------->MYB59         <---------AHL20(2)         <---------AHL20(1)               < -----ARR11(3)  <---------TOE2(3)<----------DOF2       --------->YAB1   <---------AHL20(2)         -- ---->ARR11(3)  --------->MYB111(1)     --------->AHL20(2)        <---------CCA1(2)      --------->YAB1   tatatcattaaaaaaaattaggtagcatttaactacttttatttaaaatgacgaaaatcatatttttcatatatttaaatttcataatcaaacataatat  28586400                                     <---------YAB1              <---------MYB52(1)   <--------HAHB4          <---------ANAC46         --------->YAB1          <---------ANAC58        <---------YAB1    <---------AHL20(2)          <---------ANAC58        --------->ICU4  ------->TEIL   ------>ZmHOX2a(1)     <---------YAB1             --------------->AGL15            --------->LBD16        --------->AHL20(2) --------->ARR11(3)             <---------------AGL15     ------->TEIL                  <---------AHL20(2) ---------CCA1(2)              <-----------------AGL3  <---------YAB1      <---------ICU4         <-- ----->TEIL ------>ZmHOX2a(1)  ======================================================================   gtatatcatgtttcctgttaattctctaaatttgctattattagtttctatgaatttatgaattttcctgagtatcaacatttctcatttttaatttgta  28586500  Previous    Next  AGI:  At1g76160.1    Description:  SKS5 (SKU5 Similar 5); copper ion binding / oxidoreductase. similar to SKS6 (SKU5 Similar 6), pectinesterase [Arabidopsis thaliana] (TAIR:AT1G41830.1); similar to SKS8 (SKU5 Similar 8), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G21850.1); similar to SKS7 (SKU5 Similar 7), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G21860.1); similar to PS60 [Nicotiana tabacum] (GB:CAA65634.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62000.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83942.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains Range:  from: 28582836    to: 28586027    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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