Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------>MYB83               --------->AtMYB61            <---------ARR14(2)            --------->ARR14(2)                               <----------DOF2         <---------ANAC58                                 <---------ARR11(3)     <----------DOF2     <---------O2               --------->GLK1(2)    <---------DAG2<---------ALFIN1                  <---------ARR14(2) <---------WRKY18(1)    ------>ZmHOX2a(1)           --------->ARR14(2)         --------->GLK1(1) -------->WRKY38(1) <---------ALFIN1                <-----------ARR10         <------ZmHOX2a(1) -------->WRKY12 ------>MYB46(1)                   <---------CCA1(2)     --------->YAB1 ----->ALFIN1 --------->MYB46(3)               --------->AtLEC2         <---------ATHB12 -->DAG2 --------->ANAC55(2)                   --------->ANAC58       --------->WOX13(1) -->DOF2 <---------ANAC58--------->O2          --------->ANAC58    ------>ZmHOX2a(1)   tgttgaccttttcgtaacctcccctcctcgtgacttccacatacaaaacatgcaaatctagttcttttcctccaatcacaggaatccttgtttatatcac  28562100              <---------TOE2(3)                                                                    <-              <---------YAB1                                           ----------->GT1             <-        --------->AHL20(1)                                             <---------MYB46(3)          <-        <---------AHL20(2)                                             <---------ICU4         -------        --------->AHL20(2)                     <---------ANAC55(2)    --------->ICU4          -------        <---------AHL20(1)               --------->AHL20(1)         --------->YAB1           --------     --------->YAB1                      <---------AHL20(1)         <---------ICU4      <---------ZAT18   --------->AHL20(1)                    --------->AHL20(2)      --------->YAB1         --------->ZAT18   --------->AHL20(2)                    <---------AHL20(2)  ---------->DOF2<---------ANAC55(2)    --  --------->YAB1          ----------->TGA1     --------->ANAC55(2) --------->ICU4------->TEIL<-------   acaaaaataataaaataagatagatgaaatgacgaaaactaaatttattaagtaagaagaagagaaagaataatggttacatgaacttagtggacataat  28562200         ----------->RAV1(2)      --------->DEAR3(2)                                                                       <-----      --------->MYB46(3)                                                                      ------>NtERF2    <---------ARR14(2)                                                                        <------    --------->ARR14(2)                                                                        ------- --------ANAC58                                                            <---------GLK1(2) <------- --------ANAC46        --------->LBD16                                     --------->ARR14(2)-------- --------ANAC58       <---------HSFB2a(2)                               <---------HSFB2a(2)  -------- -->ATHB51            --------->HSFB2a(2)----------->HVH21        <---------ATHB12          --------- -->ATHB12        <---------ARR14(2)   --------->TOE2(3)    --------->ANAC58           <---------ICU4 ->ICU4------->GAMYB <---------LBD16--------->ARR14(2)      --------->ANAC58     <----------DOF2 --------->GT1    --------->ARR14(2)<---------ARR14(2)    ---------->DOF2  <---------ARR14(2)<------- --YAB1--------->DEAR3(1)           --------->GLK1(2)  --------->AtLEC2 --------->HSFB2a(2) <--------   tgagtgaaaccgcctgagagtatcccagaagacagaagaatccttgacgacaacttcatgtaaagccaatggttctggatactctttaatcttcgccggc  28562300        <--------HAHB4       --------->ICU4    <------NtERF2                                                                                <---  --------->RAP2.6(2)                                --------->bZIP60(1)                  <----------DOF2 -NtERF2<---------ICU4                               <---------bZIP60(1)               <---------ARR11(3) ---ATERF1(1)         <---------ANAC58            ----------->HVH21                    --------->ARR11(3) -->LBD16             <---------ANAC46     --------->WRKY38(1)                        <---------CCA1(1) --DEAR3(1)           <---------ANAC58     --------->WRKY12                           --------->RVE1(1) ->DEAR3(1)        <---------MYB52(1)  <-------TEIL  <---------bZIP60(2)              <---------RVE1(1) ->ATERF1(2)      <-----------HVH21  <---------ARR14(2)                               <---------GLK1(1) >ATERF1(1)    <---------At5g28300<------NtERF2 --------->At4g35610                   --------->GLK1(1) --ATERF1(2)  <-----------GT1   --------->ALFIN1<---------At4g35610                  <---------ARR11(3) -LBD16<---------ATHB12      <---------DEAR3(1)<---------TOE1(1)      <----------DOF2--------->ARR11(3)   gaagtcgccatcatttctaccgtcgcttgagacggtgtcgattcgttgtccgatgacatcgctatagagagacttttagtagagacagatatcttttttt  28562400                                                                   --------->ARR11(3)          <-----                                                      ---------->DOF2              ----------->ARR10                                                     <------ZmHOX2a(1) <---------YAB1 --------->CCA1(2)                                                   <---------TOE2(3) --------->MYB52(1)       -------                                                   <---------TOE1(3) <---------DOF5.7(2)  <---------YAB1 <---------LBD16                            <---------AtMYB61     --------->YAB1 --------->CCA1(2) --------RAV1(1)                <----------DOF2<----------DOF2 ---------->DOF2  *TSS --------->ARR11(3)   tgttggggagtttttttttttttgtctggtctctcttttttgggttttggtttaaggaaagaagagaaagataacgattcaagataagatttgtgattaa  28562500                                                                     <---------ARR14(2)                                                                --------->ALFIN1                                                              ===============================bZIP_DOF                                                              ===============================bZIP_DOF                                                              --------->O2                                                              <---------O2                                  <---------YAB1              --------->TGA1a                                --------->AHL20(2)            <---------ANAC58                                <---------AHL20(2)            <---------TGA1a                            <---------AHL20(2)               ------->TEIL                            --------->AHL20(2)             =============MYC_MYB                           <---------AHL20(2)              ------->GAMYB                           <---------AHL20(1)             <---------MYB52(2)                       --------->AHL20(2)                 --------->MYB46(3)                       <---------AHL20(2)               --------->MYB52(1)       --------->CCA1(2)--------->AHL20(1)         ---------->DOF2   --------->ARR14(2)      --------->ARR11(3)<---------AHL20(2) --------->ANAC55(2)<---------ANAC58      <---------ARR11(3)--------->AHL20(2)<---------LBD16>>>>>>>>>MYB98   ---------->ID1 ----AHL20(2)   ----------->GT1<---------AHL20(2)  =====================bZIP_DOF  <----------DOF2 --- -->AHL20(2)<---------ZAT6 --------->AHL20(2)    <---------AHL20(2) <------ZmHOX2a(1) <----------DOF2   atcagagagatatagagatagaaaattaaattatttatttttgctacggatttaaaagtaacggacgtgaggatttgtcattttctttctttttgtgagt  28562600                                                                         -------->ATHB1                                                                         <---------ICU4                                                                         --------->ATHB51                                                                         --------->ATHB12                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->ICU4                                                                 <----------DOF2                             <---------AHL20(2)           <---------AHL20(2)                            --------->AHL20(2)           --------->ARR11(3)                       <------ZmHOX2a(1)            <---------ANAC46    <---------ATHB51          <--                     <---------TOE2(3)        <---------YAB1    <---------ANAC58             <-------                 --------->CCA1(2)            <---------AHL20(2)<---------ANAC58             <-------      --------->ANAC46----------->GT1     <----------DOF2<---------ARR11(3)                  <------- ------>AHL20(2)<---------ARR11(3)     <-----------GT1   <---------AHL20(1)       <---------AHL20(2)   tttaatacataccacatagatataaggaaatttaaaattttaaactttataattgtgtatatatttgctttcaaattattgtttttattttcgaggcgtt  28562700                                                                                            <--------                                                                               --------->ATHB51                                                                               --------->ATHB12                                                                               -------->ATHB1                                                                               -------->HAHB4   <----                                                                               <---------ICU4   -----                                                                              <---------ATHB51------>MYB46(1)                                                                              --------->ICU4<--------                                                        <-----------GT1    --------->AHL20(2) ------>MYB83                                                   <----------DOF2       ----------->GT1  ------>NtERF2     <---------bZIP60(2)                           <---------DAG2       --------->DAG2   <---------ALFIN1     <---------REM1(1)                          <-----------GT1        ---------->DOF2 <---------ALFIN1     <-----------RAV1(1)<---------YAB1          <---------AHL20(2)  <---------AHL20(2)--------->ANAC46 -------YAB1      --------->ICU4             <---------ICU4         --------->AHL20(2)--------->ANAC58 --ANAC58  <----------DOF2                  <---------AHL20(2)  --------->AHL20(2)    --------->ANAC58 --ANAC46 <---------ANAC58                  --------->ICU4      <---------AHL20(2) <---------ZAT18 --ANAC58 <---------ANAC58                  --------->AHL20(2)  --------->ICU4<---------YAB1<--------   ttgagtgatgttgctttgtaatttttctgatactactaatactgtattaattactttttcactgtattaattaaaaagtaattattgcaccccacctact  28562800                                                                       <---------YAB1                                                                    <---------AHL20(1)                                                                <---------ICU4                                                               --------->ICU4                                                               <---------YAB1                                                             <---------ICU4         <---------ANAC58                                    -------->ATHB1         <---------ANAC58                                    --------->YAB1       <---------YAB1                                     --------->WOX13(1) -MYB46(2)                                         --------->YAB1   <---------AHL20(2) ------DOF2                                <---------ANAC58  <--------HAHB4 ---->TOE2(3)                              <---------ANAC58 --------->ICU4                      ----- -MYB111(1)                   <-----------HVH21  ----------->RAV1(1)--------->AHL20(2)          <---- -MYB111(2)                  ----------->GT1<----------DOF2 <---------ATHB12                   <-----   ttagtttttatgcttacgagcagtcgaaatatggtcacatctatttctttccaacataatcaatcattattttatttttgaaatttcttaagtctaattt  28562900                                                 <-----------GT1                                               <----------DOF2                                            <-----------GT1                                       <----------DOF2                             <---------YAB1                  >>>>>>>>>RAP2.2      <---------DAG2                         <---------DAG2                --------->ARR11(3)    <---------ANAC58                        <----------DOF2   ----- ---->AHL20(2)  <---------ARR11(3)    <---------ANAC58                  <----------DOF2         <---- -----AHL20(2) --------->CCA1(1)  <---------ANAC58                   --------->GLK1(2)   <---------ZAT6 ----AHL20(2)--------->YAB1       <---------ANAC58                  <---------GLK1(2)<---------AHL20(2)   atatgaaaacatcgataatatctaaaaatcggactgtcttgctttttttctttaccggtttagcatattagattctttcacttttattttagtgttatat  28563000  Previous    Next  AGI:  At1g76110.1    Description:  high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein. similar to high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G04880.1); similar to unknown [Populus trichocarpa] (GB:ABK95398.1); contains InterPro domain High mobility group box, HMG1/HMG2; (InterPro:IPR000910); contains InterPro domain AT-rich interaction region; (InterPro:IPR001606); contains InterPro domain High mobility group box, HMG (InterPro:IPR009071) Range:  from: 28559936    to: 28562480    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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