Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <-----------GT1   <----------DOF2 ---------ALFIN1 ------->MYB46(3) --------MYB55(2) ----->P --->MYB46(1) --->MYB83 ----->MYB55(1) -----MYB46(2) ---->MYB46(3)                                                               <-------GAMYB<---------ICU4 -----MYB55(2)                                                              <---------ANAC46 ---->DEAR3(1)           <-------GAMYB                                      <---------DEAR3(1)    <-- ---->AtMYB61      <---------ICU4                  --------->LBD16       --------->ANAC46 --------->YAB1 -----MYB111(1)    --------->YAB1            <---------ATHB12   --------->WRKY38(1)      <---------ATHB12 -----MYB111(2)   <---------ATHB12  --------->YAB1 <-----------HVH21     <---------DEAR3(1) --------- >MYB46(3)       ------->TEIL      <-------TEIL  ------>ZmHOX2a(2)     <---------ALFIN1--------->WOX13(1)   aaccactttaaactcgatgaatcattctgttgaaacattcatgccctatgatccgtcaaatcagcgttgatcaccacggcgttgtttctcaatcatctct  28548300                                         <---------DEAR3(2)                                       --------->ATERF1(1)                                       <------NtERF2                                          -------                                      <---------ATERF1(1)                      ======================            --------->ANAC58          ------>NtERF2                            ------>ZmHOX2a(2)-----         --------->LBD16              <-----------HVH21                       <------ZmHOX2a(2) -----        --------->ANAC46             <---------DEAR3(1)                      --------->ARR14(2)------       <---------LBD16          --------->MYB52(1)   --------->YAB1          <---------ARR14(2)------   <----------DOF2           --------->ANAC58      ------>MYB46(1)         --------->LBD16    -------  <---------ANAC58           --------->ANAC58      ------>MYB83          <---------LBD16      <------NtERF2  <---------ANAC58      <---------At4g35610        --------->MYB52(1) --------->MYB46(3)    --------- --------DOF2        ---------->DOF2 --------->DEAR3(1)--------->At4g35610--------->HSFB2a(2)------>NtERF2 >At4g35610 --------->ANAC58 --------->ANAC46 <---------ALFIN1  <---------YAB1=======================   ctttgcttctccgcaagcttatctaaagcagacgaaacggcgtcgcttccacctatcagaagccttgtgataacctccggatccgtctcaaatcgcgccg  28548400                                                                 <-------MYC2                                                                 ------->MYC3                                                                 ------->MYC2                                                                 <-------MYC3                                                                <---------O2                                                                --------->O2                              --------->ANAC58                  --------->TGA1a                              <---------ANAC55(2)               --------->ANAC46                              --------->ANAC58              <<<<<<<<<GATA-2 -->RAP2.3(1)                 --------->ANAC46              <<<<<<<<<GATA-4 ==============HOX2a_HOX2a    --------->bZIP60(2)           <<<<<<<<<GATA-1 ---->At4g35610               <---------TGA1a             --------->WOX13(1) ->NtERF2                     --------->TGA1a      --------->LBD16     --------->ARR14(2)        ---- --->RAP2.3(2) <---------ANAC58          --------->AHL20(2) <<<<<<<<<GATA-3        --------->ANAC58 --->DEAR3(1)  <---------ANAC58<-----------HVH21  <---------LBD16<-------PIF5      ----------->GT1 -->DEAR4(2)------>ZmHOX2a(1) --------->O2        --------->LBD16------->PIF5      --------->ANAC58 >ANAC46------>ZmHOX2a(1)   <---------ALFIN1     <---------LBD16<---------TGA1a  <---------ANAC46<--- ==============HOX2a_HOX2a <---------REM1(2)     ----------->RAV1(2)   <---------ARR14(2)      ------   cttcaaactccttcctcgcgttctctctcaacacgtccctccataaatttcccctggaatcaatccacgtgaagaaccgagtcgctcgtaatatgtctct  28548500                            <-----------HVH21                        <---------ZAT2                      <-------MYC2                      ------->MYC2                      <-------PIF4                      <-------MYC3                      ------->MYC3                      ------->PIF5                      ------->PIF4                      <-------PIF5                     <---------ANAC58                     <---------ANAC58                     <---------ANAC46 ------>NtERF2                     --------->ATERF1(1)                     <------NtERF2   <---------ANAC46                    ------------>OsbHLH66                    ------>NtERF2   <------NtERF2                    --------->ABI4(2)--------->DEAR3(1)                   <---------ANAC46 --------->ATERF1(1)                   <------------OsbHLH66                  <------NtERF2     --------->RAP2.3(1)                 ------>NtERF2     <---------ATERF1(1)                --------->LBD16    ------>NtERF2<---------GLK1(2)       --------->ATHB12                --------->ANAC46  --------->ANAC58                     <---------ATHB51               <---------HSFB2a(2)--------->ANAC58                     <---------YAB1 ----->ZAT14   <---------LBD16  --------->At4g35610                 ------>ZmHOX2a(2) ------ZAT14   --------->HSFB2a(2)--------->ANAC46              <---------YAB1 --------->AtSPL8--------->LBD16<---------At4g35610        ---------->CDC5          <----------DOF2   gtacaaactcaacgcttcccggcgcgtgctcgtcagacgccgtctattcagaaactcagcctcatcgtgatcgattattggtttctctttcttcgctaga  28548600                                                                 --------->ABI4(1)                                                                 --------->At4g35610                                                                 ------>NtERF2                                                                 <---------At4g35610                                                                --------->DEAR3(1)                                                                --------->RAP2.3(2)                     --------->At5g28300                        <---------ALFIN1<-----------ARR10                   --------->ANAC46                      ---------->DOF2        --------->ARR14(2)                   --------->ANAC58                     <---------ALFIN1        --------->AGP1                   --------->ANAC58                    <---------REM1(2)        --------->ARR11(3)                 <---------ALFIN1            --------->DEAR3(1) <---------ATERF1(1)               ------>ZmHOX2a(1)             ------->GAMYB     --------->ORA47(2)            ------>MYB83          --------->HSFC1(2)                --------->DEAR3(2) <------NtERF2    <---------ARR11(3)          --------->HSFB2a(1)               --------->MYB46(3) --------->RAP2.3(1) --------->HSFB2a(2)          <---------HSFB2a(1)               --------->ATERF1(1)--------->ATERF1(1) <---------HSFB2a(2)          <---------HSFC1(2)               <---------ATERF1(1) --------->DEAR4(2) ------>ZmHOX2a(2)         ----------->ARR10        <---------ANAC58   <---------ETT(2)           <---------AGP1<------     --------->HSFC1(1)<---------ARR14(2) <---------ARR14(2)  <---------RAP2.3(1)<------ZmHOX2a(2) --     <---------HSFC1(1)--------->ARR14(2) --------->ARR14(2) --------->DEAR3(1) <---------ARR14(2)<--     --------->HSFB2a(2)          <---------ANAC58   --------->ETT(2)          <---------CCA1(2)  <--     <---------HSFB2a(2)     ------->TEIL<------ZmHOX2a(1)---------->CDC5<-------TEIL        ------>MYB46(1) <----------DOF2<---------REM1(2) <---------ANAC46--------->O2------>NtERF2 <---------At4g35610   ---   tgtctttcgagaagctcctccacggtatctggaccttcgtgcaggaaccgcctcgtcgacacagcgccgctccgattcatcagatctagacgacctgcca  28548700               --------->HSFC1(2)                              <------ZmHOX2a(2) -----------AGL1                                              <---------ARR14(2) ------->GLK1(1)              --------->At4g35610         <-----------GT1                     ------- -------GLK1(2)<---------HSFC1(2)                  --------->YAB1               ------------>CBF -------ARR14(2)            <---------ICU4   ----------->RAV1(1)     ----------->HVH21<---------ANAC58 ------>ARR14(2)       ------>NtERF2        *TSS<------------CBF  ------>ZmHOX2a(1)   <---------ANAC58   gatttcgccatttctgaagcttcgcagccatcatctctctcaaacaacaacattgaaaattttcgatcctggtgacaacaacaacaatgcttgataacat  28548800                                                          ----------------------->TaNAC69(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                 <---------ICU4                                                 --------->ATHB12                                                 --------->YAB1                                                <---------YAB1                                                <---------ATHB12                                                --------->ICU4                                              --------->YAB1                                             <---------AHL20(2)                                            --------->AHL20(2)                                            --------->AHL20(1)         --------->ANAC55(2)    -------             --------->HSFB2a(2)            <---------AHL20(1)         --------->ANAC46  ------>NtERF2             <---------HSFB2a(2)       ------------>CBF  --------->ZAT18      --------->YAB1  <------ -->YAB1 <---------GLK1(1)        ---------->DOF2<--------HAHB4      <-----------GT1    --------->DEAR3(1)   aatgggcttcgatttctgaaactgtataagcccagttaaagcccaatataatcattaagttcgcaaatgttatacgtctctaataagacgacgacggatt  28548900                               ---------->CDC5                             --------->ANAC46                           --------->AtMYB61                           <---------ALFIN1                                               <-------TEIL                          --------->MYB46(3)                                           <---------ANAC58                        --------->DEAR3(1)                                             <---------ANAC58                        <---------ALFIN1                                       ------>ZmHOX2a(1)                        --------->AtMYB61                                     --------------->AGL15                       --------->MYB46(3)                                <---------HSFB2a(1)                   --------->ANAC46                                      --------->HSFB2a(1)                   --------->ANAC58                                      --------->At4g35610   <---------AHL20(2) ------->TEIL                                       <---------HSFC1(2)  --------->AHL20(2) --------->ANAC46                               <------ZmHOX2a(1)  <---------ANAC46 -->ARR14(2)       --------->ANAC58                           <------NtERF2  <-----------------AGL1 ---ARR14(2)     ---------->DOF2                      <---------HSFB2a(2)--------->HSFC1(2)   tagataaaatttgagcccaaaacgcaccaccactcagcgttttagacctgtcttctccagaggcagagaaggagaagcttcctcatatggcgttcatagc  28549000                                        --------->YAB1                                        <---------ICU4                                       --------->ICU4                                       <---------YAB1                                     --------->YAB1                                     <---------ICU4                                                 -                        ------>ZmHOX2a(1) <---------YAB1                                    <--------                        <---------At4g35610                                            <-----------GT1        <---------MYB52(1)          <---------ATHB12           --------->GLK1(2) <---------TOE2(3)  - ---------->DOF2        --------->At4g35610          ---------->DOF2           ---------->DOF2      -   cgaagaagccgtttgtctattccttcctctgaatgcaaatcatcatgactcatcccaaagatgagaatttgaaagatgctataaaggttttactatgctt  28549100                                                                             ----------->HVH21                                                                            ------->MYC2                                                                            <-------MYC3                                                                            <-------MYC2                                                                            ------->MYC3                                                                           <---------O2                                                                           --------->ANAC55(1)                                                                           --------->ANAC58                                <-------TEIL                               <---------TGA1a                             <---------ANAC46                              --------->ANAC55(2)                             <---------ANAC58                  --------->ANAC46          <-------TEIL       <---------ANAC55(2)         --------->KAN4(2) <---------ANAC55(2)    --------->DAG2           <---------ANAC55(1)        <---------MYB46(3) --------->ANAC58   ---------->DOF2           <---------ANAC58          <---------WOX13(1)  --------->TGA1a -------->ANAC58             --------->ANAC55(2)    <---------YAB1         --------->O2<---------ZAT6 -YAB1 ----------->GT1     <-----------GT1      <------ZmHOX2a(1)          --------->ANAC46 -------->ANAC58       <---------AHL20(2)   =========================================bZIP_DOF -------->ANAC46       --------->AHL20(2)   ---------->DOF2    <---------ALFIN1 --------->CCA1(2)   atacgaaaagggttcaaatagacaattttttacgtgcattgagaagaaaaggatgtgattgttccacacactgaaacacgtgatacgaagtgtaagtcta  28549200  Previous    Next  AGI:  At1g76060.1    Description:  EMB1793 (EMBRYO DEFECTIVE 1793); catalytic. similar to Os03g0136600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048895.1); similar to putative complex 1 protein, LYR family [Sorghum bicolor] (GB:ABE77205.1); contains InterPro domain Complex 1 LYR protein (InterPro:IPR008011) Range:  from: 28547994    to: 28548744    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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