Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <------NtERF2                   ------>NtERF2                  ------>NtERF2                  --------->RAP2.6(2)                 <---------ANAC58                 <---------ANAC58                 <---------DEAR3(1)                 <---------RAP2.6(2)                 <---------ATERF1(2)                 <---------ANAC46                 --------->ATERF1(2)                --------->RAP2.6(3)                --------->ATERF1(1)                                     --------->ZAT14              --------->ALFIN1                                          <---------ZAT14         <----------DOF2                                              <---------YAB1         --------        <---------ANAC58               --------->LBD16     --------->ANAC58                  --------        <---------ANAC58              <---------LBD16      --------->ANAC46      --------->LBD16    <---------ANAC58                 <---------LBD16       --------->ANAC58    <---------LBD16      <    <---------ANAC58               <-----------HVH21    <---------ARR14(2)   --------->ARR14(2)    --  <---------ARR11(3)               <---------SPL7       --------->ARR14(2)   <---------ARR14(2)  <---  --------->ARR11(3)     <---------GLK1(2)      --------->LBD16     --------->YAB1           --------   tgaagagcttgcttcagtggcggccaagagtctctactgtccgggcaaaccgggtcaaaatacgcctcaattagtatagtatccgggtcgaaacgatgac  28537100                                       <---------ZAT2                                       --------->ZAT2                                       --------->At4g35610                                 <------NtERF2                                 --------->ZAT18                                <---------ORA47(2)         --------->ANAC58       <---------ATERF1(1)         --------->ANAC58       <---------ERF1      <---------WRKY12          ------>NtERF2   <------MYB46(1)              <---------RAP2.3(1)   <------MYB83                 --------->RAP2.6(2)  <---------MYB46(3)           <---------RAP2.3(3)                                                  <  --------->MYB55(2)           <---------DEAR3(1)                                                <--- --------->ALFIN1              <---------RAP2.3(2)                                               <--- <---------MYB55(1)            --------->ATERF1(2)                                               ---- <---------ANAC46              <---------ATERF1(2)                                     --------->MYB46(3) <--------P                  <---------ATERF1(1)                                     <---------ARR14(2) ->WRKY38(1)                --------->DEAR3(1)                  ------->GAMYB        --------->ARR14(2) --->HVH21                  <---------DEAR3(1)         =================MYC_MYB<-----------RAV1(2) <- ---------MYB52(1)          <---------ATERF1(2)        --------->TGA1a    --------->ANAC58       ---- ------->LBD16             --------->DEAR3(2)          --------->O2       --------->ANAC46      <---- ------LBD16            ----------->HVH21     ===================bZIP_DOF --------->ANAC58      ----- ->WRKY12--------->ANAC46<---------ALFIN1     <----------DOF2  --------->MYB46(3) <------ZmHOX2a(1)--   ccggtgggtaaacgaaaccatcttgcctcaccggcggcactagctgcgcttgtactctcgtctcaacgacgaagacaaggaacaggagaaccgctcgaat  28537200                                                                                --------->ANAC55(1)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                <---------ANAC55(2)                                                                                --------->ANAC55(2)                                                                                --------->ANAC58                                                                             --------->ARR14(2)                                               ----------->GT1               --------->ZAT14                                              <---------YAB1                 <---------ZAT14                                              --------->ICU4                 <---------ARR14(2)                                            <---------At4g35610       <---------DEAR3(2)       ----------->HVH21                  <------NtERF2              <---------DREB2C(2) ---------ICU4                           --------->LBD16             <---------ANAC46 -----HAHB4                             --------->DEAR3(1)           <---------DEAR3(1) ------ICU4                       <---------ARR14(2)                 <---------DEAR4(1) ----->YAB1                       --------->ARR14(2)                 <---------At1g77200 --------YAB1               *TSS  <---------GLK1(2)                  --------->ETT(1)              -- ---->ATHB1           <-----------GT1  <---------LBD16              <------NtERF2                 <-- -----ATHB12     <----------DOF2--------->LBD16--------->ATHB12    <-----------HVH21       <---------YAB1 ---->ICU4       <---------DAG2--------->HSFB2a(2)                --------->ALFIN1   --------->MYB46(3) ------->ICU4 <---------ALFIN1 <---------HSFB2a(2)             <---------DEAR3(1)  --------->MYB52(1)   cattattctctgactcacactttttctctcttcccagaatcgccggagatgattaaaacagagggacggtgtcggtgagtatacgcaacggctacgatta  28537300                                                                --------->ALFIN1                                                              <---------ANAC58                                                              --------->bZIP60(1)                                                              <---------ANAC55(1)                                                              <---------ANAC46                                                              <---------ANAC55(2)                                                              <---------O2                                                              --------->O2                                                              <---------ANAC58                                                              <---------bZIP60(2)                                                              --------->TGA1a                                                              --------->ANAC55(2)                                                              <---------TGA1a                                                              <---------bZIP60(1)                                                              >>>>>>>>>>HY5                                                             ----------->bZIP910(1)                                                             <-----------------------TaNAC69(2)                                                             ----------->bZIP911(1)                                                           ----------->TGA1                                                      <---------ICU4                                                     --------->ICU4                                                     <---------ATHB12                                                     <---------ATHB51                                                 ----------------->AGL3                                        --------->MYB46(3) ----------->HVH21                  <---------MYB52(1)    <------------AtMYB77<---------TGA2(2)    <---------At4g35610     ============================================bZIP_DOF    --------->At4g35610     <----------DOF2<---------MYB52(1)----------->STF1 --------->GLK1(2) ------->ANAC46  <-------GAMYB          ================================MYC_MYB                ------ -------LBD16------------>AtMYB77    ----------->HVH21--------->YAB1       ------------>CBF----------   ctcggaagctaagcgagacagttacctctcctttcatctctaaccgttgatttcaattatggtgacgtggcagaaaacacaatctggtaatgggccatat  28537400                                     <---------ANAC55(2)                                     --------->ANAC55(1)                                     --------->ANAC55(2)                           ----------->GT1                      --------->AHL20(2)                      <---------AHL20(2)        --------->ZAT18                <------MYB46(1)      --------->ANAC58                           --------->CCA1(2)                <------MYB83--------->At5g28300 <---------ZAT18                <---------ARR14(2)                ----------->GT1      ----------->GT1                           --------->ARR11(1) --->ARR14(2)  --------->MYB46(2)    --------->ANAC46                          --------->ARR11(3) ------->AGL1  --------->MYB59       --------->ANAC58      *TSS          --------->CCA1(2)      <----   ttgtaatgttatagagtttggtatttaaactgtaattacacgtaaataagagccctccctctacaaaaacgatagatttgagatatggtccaactacgtt  28537500                                                                                       <----------DOF2                --------->TOE2(3)                        --------->At4g35610 <---------TOE1(2)                --------->YAB1                           <---------ZAT2      <---------TOE2(2)                --------->TOE1(3)                        --------->ZAT2      --------->LBD16        < ---TEIL --------->YAB1          xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <-----------RAV1(2)     -   cacagagagactcataaaccataactctctctccctctctccctctctccctctctctctgctcgaatcgaaccgttcccaggtatgtgctttgttgatt  28537600                                                                    <---------DAG2                      <---------CCA1(2)                       <-----------GT1                    ----                    <---------ANAC55(2)                     --------->GLK1(1)              <---------WOX13(1)            --------->GLK1(2) <---------ANAC46             <---------ARR14(2)            --------->ATHB12          --------->HSFB2a(1) <---------ANAC58             <---------GLK1(2)            <---------YAB1          <---------HSFB2a(1) <---------ANAC58             --------->ARR14(2)         ---------------    --------->At4g35610   <----------DOF2                --------->LBD16              --------------- <------ZmHOX2a(2)  <---------ANAC58                   <---------LBD16         --------->LBD16   ---- ---------ARR11(3)  <---------ANAC58               <-----------HVH21<----------DOF2  <--------------- -------->ARR11(3)  <---------ANAC46              <----------DOF2<-----------GT1   --------->GLK1(2)   tagatcatcagaaaattctattgcgtctctttccttgtaccaagttgtttcactttcaccggattttctactttctgcatccgagtttctatgattggat  28537700                                                        --------->ZAT2                                                        <---------ZAT2                                                        --------->At4g35610                                                       <---------ARR14(2)                                          <---------MYB46(3)                                        <---------MYB52(1)                                       <-------GAMYB   --------->ARR14(2)                                      <---------MYB46(3)<---------At4g35610                                      <---------ANAC46====================================HOX2a_HOX2a                               --------->SPL7         <------ZmHOX2a(1)                              ------>NtERF2        <---------LBD16         <---------TOE2(3) ------->GT1                 --------->ZAT18       <-----------RAV1(2)     <---------YAB1 >AGL15                     <---------ANAC46    <---------GLK1(1)    <------MYB83 ------>WRI1                <---------ANAC58  --------->ATHB12       <------MYB46(1)----------->GT1 -->ZmHOX2a(2)              <---------ANAC58<---------WOX13(1)  --------->ATHB12   ------>ZmHOX2a(2) --AGL3                    <---------LBD16--------->ATHB12   <----------DOF2     <---------AGP1<-----   cgaaatttgaatttccattgattttgaattgcggactgcgtcgttgattgatttcaggagctgctttgatttggtttatcgttgatctgtgaaaatgggg  28537800                                              --------->ANAC58                                              --------->ANAC58                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)      ------>ZmHOX2a(2)          ----------------------->TaNAC69(2)    --------->ARR11(3)           <---------ARR14(2)           <------ZmHOX2a(2)    <---------ARR11(3)           --------->ARR14(2)    <---------ATHB12--------->YAB1 <---------KAN4(2)              <---------GLK1(1)<-----------GT1 --------->ZAT6                ------ -----ID1                  <---------LBD16  <--------P <------ZmHOX2a(2)                <---------ARR11(3)   acgaatgatctcgacatcgaagaagggactctggagatcggcatgggtaagtcaccgatcatggatcacactatattgattttgtttctagttcttcctc  28537900                                                                <---------ZAT14                                                                --------->ZAT14                                                            <---------HSFB2a(2)                                                         --------->GLK1(2)                                                        --------->KAN4(2)                                                       --------->KAN4(1)                                                       <----------TaMYB80                                                       <---------HSFB2a(1)                                                       --------->GLK1(1)                                                       <---------GLK1(1)                                                       <---------KAN4(1)                                                       --------->HSFB2a(1)                                                      ---------->TaMYB80                                                      <---------KAN4(2)                                                      --------->ARR11(3)     >>>>>>>>>ARR2                --------->GLK1(2)   <---------ARR11(3)    --------->ATHB12              --------->ARR14(2)  <---------ARR14(2)   <---------YAB1                 <---------ARR14(2)  --------->ARR14(2)  <----------DOF2 >ZmHOX2a(1)                 ------>ZmHOX2a(1)<---------YAB1--------->HSFB2a(2)<-----------GT1   <---   tgtttttgattgtgttgattcagaacttatcctccaaatctgggtttttttatagggatattctagtactctggctctttttgaccttgctgatgttgtt  28538000  Previous    Next  AGI:  At1g76020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20225.1); similar to unknown [Solanum tuberosum] (GB:ABB55396.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 28535758    to: 28537228    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g76030.1    Description:  (VACUOLAR ATP SYNTHASE SUBUNIT B1); hydrogen ion transporting ATP synthase, rotational mechanism. Identical to Vacuolar ATP synthase subunit B [Arabidopsis Thaliana] (GB:P11574;GB:Q42205;GB:Q8L584;GB:Q9LQR5); similar to (VACUOLAR ATP SYNTHASE SUBUNIT B2), hydrogen ion transporting ATP synthase, rotational mechanism [Arabidopsis thaliana] (TAIR:AT4G38510.2); similar to (VACUOLAR ATP SYNTHASE SUBUNIT B2), hydrogen ion transporting ATP synthase, rotational mechanism [Arabidopsis thaliana] (TAIR:AT4G38510.4); similar to (VACUOLAR ATP SYNTHASE SUBUNIT B2), hydrogen ion transporting ATP synthase, rotational mechanism [Arabidopsis thaliana] (TAIR:A Range:  from: 28537459    to: 28540855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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