Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                -----                                                                                               <-----                                                                                              -------                         --------->ANAC46                                                    --------                         --------->ANAC58                           --------->KAN4(1)       ---------                         --------->ANAC58                           <---------KAN4(1)       --------- ----->ANAC58        --------->ANAC46           <---------ICU4     <---------KAN4(2)      <---------ANAC58 ----->ANAC58        --------->ANAC58          <---------YAB1---------->DOF2              <---------ANAC46 ----->ANAC46        --------->ANAC58>>>>>>>>>MYB2       ------->GAMYB--------->GLK1(2)   <---------ANAC58   cacaaactatcaaacaaacaaacacacaagtaagaagaaaaccaatttcatcatttcaacagcaaaaggaacaatctttgacatacccattagcgtgacg  28527600                 <---------------AGL15   <---------AHL20(1)   --------->AHL20(1)   <---------ARR11(3)   --------->ARR11(3)   --------->AHL20(2)         --------->GLK1(2)   <---------AHL20(2)         --------->ARR14(2)  --------->AHL20(2)          <---------ARR14(2)                             --------->DAG2 ----->At5g28300 --------------->AGL15                             --------->ANAC46 ------>GT1     ----------------->AGL1                          --------->ZAT14 ----ANAC46     <-----------------AG                            <---------ZAT14 -->RAP2.6(3)   ----------------->AGL2                      <-----------GT1---------->DOF2      ----- ->MYB52(1)<---------ICU4     --------->ARR11(3)       <---------AHL20(2)--------->YAB1         <---- -->HVH21  --------->YAB1     <---------ARR11(3)   ----------->GT1 --------->ZAT6             ------- -->TGA1--------->YAB1  ----------->GT1        ---------->DOF2--------->ANAC46              ---------   gtaaatatattgatcatgacccgatttagtaaaatctgcaaaaacattgaaaagggtttaattcacttcacactatcaaaaggggttttgaaaaacacta  28527700         --------->ARR14(2)         <---------ARR14(2)         ------->TEIL    <------MYB46(1)    ----------->GT1    <------MYB83                                                                           ----------   --------->MYB111(1)                                       <------ZmHOX2a(1)        <---------ARR11(3)   --------->MYB46(2)                                   ----------->HVH21    --------->ARR11(3)     <  <---------MYB55(1)            --------->ANAC58      --------->At4g35610    <---------ARR11(3)     - ---->ZAT14        --------->TOE2(2)          <---------ANAC58      <---------GLK1(1) <---------ARR14(2) -----ZAT14        --------->TOE1(2)          <---------ANAC46  <------ZmHOX2a(1)     --------->ARR14(2) -->ANAC46       --------->GLK1(2)            <---------ANAC58 ----------->GT1        --------->ARR11(3) >ZAT6   --------->GLK1(2)      --------->ANAC58      <---------At4g35610  --------->HSFB2a(1)-------   aacagtaggtgaatctgagaacctgtgatgaagtaagaaacaaaattgacttgtgtagctgaaggaggagaaatcggaagttctccaatatctgaaagca  28527800                                                            <---------DEAR3(1)                                                            <---------MYB46(3)                                                         <------MYB46(1)                                                      <-------GAMYB                                                     <-----------RAV1(1)                                                <---------At4g35610                                             <---------At4g35610                                             --------->At4g35610                                    <                                          --------->ZAT2 <------MYB83                            ----  <----------DOF2                         --------->At4g35610                                    ---- >DOF2                                    <---------ZAT2 <---------MYB46(3)                      ---- ---------HSFC1(2)                        <---------At4g35610 <------NtERF2                    <----- -------->HSFC1(2)                    --------->STY1(2) <---------AtMYB61                <----------DOF2 -->At4g35610       ------>ZmHOX2a(1) <---------STY1(2)<---------MYB52(1)       ---------->ID1 <-----   gaagctttctcaattcgtcttcctcttcatcttcttgtgtagctagctgctgcttctgttggtcgtcgcaatcttctacttcgtcgtttctctttgggtt  28527900                             --------->HSFB2a(1)                             <---------HSFB2a(1)                             <---------HSFC1(2)                        --------->HSFC1(1)                                            ----------->GT1                        <---------HSFB2a(2)                                          <------NtERF2                        --------->HSFB2a(2)                                         ------>NtERF2            <---------ARR14(2)                                                     <---------RAP2.3(3) ---------AHL20(2)      <---------HSFC1(1)          --------->ARR14(2)             <---------DEAR3(1) ------->GT1--------->ARR14(2)                      --------->GLK1(2)           --------->WRKY12 ----->MYB52(2)        <---------LBD16              <---------ARR14(2)          ----------->HVH21 ----->MYB46(2) ------>ZmHOX2a(1)                   <-----------ARR10         <----------DOF2 ----MYB52(1)  --------->TOE2(3)      --------->REM1(1)>>>>>>>>>>>>>>>>>LFY  --------->TOE2(3)    *TSS ---P      <---------CCA1(2) --------->HSFC1(2)    <---------GLK1(2)      <-----------GT1       -----   agttaattcgattgtatcctcaatttctggaaacttcgctacatcaagcttcagaatctccattgtttcgactgtttaacctttgacggcgaaaaaacaa  28528000                          <---------MYB59                         --------->ANAC55(2)                         <---------ANAC55(2)                       <-----------GT1                                  --------->YAB1                       --------->AHL20(2) ---------->DOF2     <---------TOE1(2)                 ----------->GT1         --------->MYB52(1)------>ZmHOX2a(2)              --------->ARR14(2)         ---------->DOF2 --------->ARR11(3) ---->MYB52(1)<---------ARR14(2)--------->MYB52(1)       <---------ARR11(3)  <-------TEIL    <-------   tcggagttacttcgccgatttgtaattacataactaatgggcctaaaggcccatctactgatcttgggtttgaatcatgttcatgttcttctatattact  28528100                             <---------GLK1(2)                       <-----------GT1                   --------->AHL20(2)                                               ----------->GT1                   <---------AHL20(2)                <---------YAB1 --------->GLK1(2)                  <---------AHL20(2)               ----------->GT1 --------->ARR11(3)                  --------->AHL20(2)          <---------ZAT18      <---------ARR11(3)   ---------->DOF2                  --------->AHL20(1)  ------>ZmHOX2a(2)  ---------->DOF2           --------->DAG2                  <---------AHL20(1)  >>>>>>>>>>>>>>>>>LFY--------->DAG2       --------->YAB1 ----GT1 <---------ZAT14  --------->HSFB2a(2) --------->ZAT18    <---------TOE2(3)---------->DOF2 <--   aacttcacttcttcagtgaatttatttaccagaattttgatcccaatgtggacttgtgataaagtttgagattttgttttttcataaagtaaaagaactg  28528200                                                                                           <---------ICU4                                                                                          <xxxxxxxxxx                                                                                          <---------YAB1                                                                                          <xxxxxxxxxx                                                                                        <---------ICU4            --------->ANAC58                                                            --------->YAB1            --------->ANAC58                                                           --------->ICU4        --------->YAB1                                                                 <---------ATHB12     --------->YAB1    <---------At4g35610         ------->GAMYB                 <---------HSFB2a(2) <-------TEIL    --------->DAG2             <---------ZAT6                       --------->HSFB2a(2) -------ANAC46  ---------->DOF2         ---------->DOF2      ----------->GT1  --------->GLK1(2)   atgtgcataataacaagaaaaagtcagataattcaaaataacaaaagtgttaacagacaaaaacagtagaatttgaaacaaatctagaaatcatcatcgt  28528300                                                                                            ---------                                                                                            <--------                                                                                          <------NtERF2                                                                                         --------->LBD16                                                                                        <---------ANAC58                     <---------ZAT2                                                     >>>>>>>>>>E2Fa                     --------->ZAT2                                                     <---------ANAC46                     <---------At4g35610                                                <---------ANAC58                  <---------ANAC58                                                     <---------LBD16            ------->TEIL                                   ------>ZmHOX2a(1)           <<<<<<<<<E2Fc  ------>ZmHOX2a(1)<---------ZAT18                     <-----------GT1         <---------ANAC58 --------->TOE2(3)<---------ANAC58        <---------At4g35610                  <---------ANAC46 xxxxxxxxxxxsmallRNA(si3) ------>ZmHOX2a(1)        <----------DOF2             <---------ANAC58------ xxxxxxxxxxxsmallRNA(le3)<---------ALFIN1 --------->At4g35610      <----------DOF2     <<<<<<<<<E2Fd   cttcctcagccatgtatttagcgagctcctcttcttgctgtttcatctcccttcttttctcctcgctctctttctccctgtgcgtgtttggcgggaacct  28528400        --------->MYB46(3)        <------------MYB.PH3(1)                                              <---------ANAC46     ----------->HVH21                                                     <---------ZAT14 <---------ZAT14                                                           <---------ZAT18 --------->ZAT18                               ----------->GT1             --------->ZAT18 <---------ZAT18                            ------>ZmHOX2a(1)       --------->ATHB12            <---- --------->ZAT14                        --------->ARR14(2)         <-------TEIL                 <---- >ARR14(2)                              <---------ARR14(2)      <---------MYB46(3)              <---- -ARR14(2)    --------->ATHB12      --------->ANAC58         <-----------RAV1(1)        ----------->RAV1(2) --->TOE2(3)<----------DOF2         --------->ANAC58  --------->ANAC46     --------->ZAT14------>ZmHOX2a(1)   cagtgctctaaccgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggttcattagtggagtagatgtctcctgtttcc  28528500  Previous    Next  AGI:  At1g75980.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO60935.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053) Range:  from: 28526215    to: 28527998    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g75990.1    Description:  26S proteasome regulatory subunit S3, putative (RPN3). Identical to Probable 26S proteasome non-ATPase regulatory subunit 3b [Arabidopsis Thaliana] (GB:Q9LQR8); similar to EMB2719 (EMBRYO DEFECTIVE 2719) [Arabidopsis thaliana] (TAIR:AT1G20200.1); similar to Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) (GB:Q06364); similar to unnamed protein product [Vitis vinifera] (GB:CAO47402.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61954.1); contains InterPro domain PCI/PINT associated module (InterPro:IPR013143); contains InterPro domain Proteasome component region PCI (I Range:  from: 28528154    to: 28530437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version