Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                                -----                             <---------WOX13(1)                                                 -----                           --------->ATHB12                                                     <----                           <---------ICU4                                                       <----                           <--------ATHB1                                                       <----                           -------->HAHB4                                                     <------                          --------->ICU4                                                    ---------                          <---------YAB1                                                    <--------                        --------->YAB1                                                     --------->AHL20(2)                        <---------ICU4                                                  <---------AHL20(2)                  --------->ANAC58                                                      --------->AHL20(2)                  --------->ANAC58 --------->AHL20(1)                                  <---------AHL20(1)                  --------->ANAC46 <---------AHL20(1)                                  --------->AHL20(1)                 <---------LBD16   <---------AHL20(2)                                  --------->AHL20(2)                 <---------At5g28300     <-----------GT1            <---------ICU4     <---------AHL20(2)   --------->AHL20(2)  --------->ICU4   <---------AHL20(2)         <---------YAB1 <---------AHL20(2) -MYB52(1)      <-----------GT1   --------->AHL20(2) <---------ANAC46             --------->AHL20(2)   ctgaattaaaaactattttcacggcataatgattgattatattttatctcatcttgtttgtattatttgataattgtattcgatttaaataaaattaata  28504700     ---------->ID1 <---------ANAC58 <---------ANAC58 --------AHL20(2) ----------GT1 ---->AHL20(1) ---->ARR11(3) -----ICU4               --------->ANAC46 -----ARR11(3)          --------->ZAT14                                               ----------->TGA1 -----AHL20(1)          <---------ZAT14                                  ------->TEIL ----------->HVH21 ---TOE2(3)         <-----------GT1                        <---------HSFB2a(2) ------->TEIL         < >AHL20(2)     <---------AHL20(2)                          --------->HSFB2a(2) --------->ARR14(2) --- -AHL20(2)<---------AHL20(2)                    --------->MYB59<-------TEIL    <---------ARR14(2) ---   ttttcttgttgttttattttttttactacacaacttaacattcttgtagttagggcctcttcgagtacatggatgaatgtgaatctacatgacgaaacca  28504800                                                                        ---------->DOF2                                                                   <------MYB46(1)                                                                   <---------ANAC58                                                                   <------MYB83                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                   ----------->GT1                              --------->WOX13(1)                  <---------MYB46(3)   --------->DOF5.7(2)      <---------YAB1                        --------->MYB111(1)               < <---------ANAC46  <---------YAB1                                 --------->MYB46(2)               <- ---------TOE2(3)<---------ICU4                                   <---------AtMYB61            <----- ------>WRKY12   --------->YAB1                      <----------DOF2 <---------ANAC46<---------GLK1(2) -------->HVH21 <---------ATHB12       ---------->DOF2    <----------DOF2--------->DAG2  <----------DOF2   ttgacgtttacaaaacaaatcatcatatatatcattcattctaaagtcttgttttcttttctttttgtttggtgtaaagcggctacatattctttatttt  28504900                                             --------->ARR11(3)                               <------                                             <---------ARR11(3)                            <---------ALFIN1                                         --------->YAB1                                   --------->MYB46(3)                                         --------->ATHB51                                ------>MYB46(1)                                         <--------HAHB4                                  ------>MYB83                                         <---------ICU4                                 --------->ANAC46                                         <---------AHL20(2)                             --------->MYB55(1)                                         -------->HAHB4                                --------->MYB46(3)                           <----------DOF2 <---------YAB1                              <---------MYB111(1)                <-----------TGA1         -------->ATHB1                            --------->ZAT14                <-----------HVH21       <---------YAB1                             <---------ZAT14               <---------ANAC58      <---------AHL20(2)                          --------------->AtSPL8       --------->ETT(2)    <---------WOX13(1)<-----------GT1                    <---------ANAC46 ---------AHL20(2)   <---------ARR14(2) <---------ATHB51                      ------>ZmHOX2a(1) --------AHL20(2)    --------->ARR14(2) --------->ICU4                   --------->YAB1<---------MYB55(2) ----AHL20(2)  <---------ANAC58   ----------->GT1   ------>ZmHOX2a(1)   <-------TEIL ------->TEIL  --   ttttatttgtctacatttcgtcagatttgatttatggagttaattattatcttcctagctaaaacatgctgacattcatcctgtgtgtacccaccacttt  28505000                        ---------->DOF2                                        <---------TGA1a                     ----------->RAV1(1)                                    ----------->HVH21                    <----------ID1                                    <-----------GT1          <---------ANAC58                                        <---------AHL20(2)  ------->TEIL--------->TOE2(3)     <---------------------WRI1   <---------AHL20(1)            *TSS<- ----DOF2 <---------ANAC58        --------->O2                   <---------ARR11(3)           ------- ------->AtLEC2------>ZmHOX2a(1)  <---------O2                   --------->ARR11(3) --------->At4g35610   catgcatttttggcttccttagacaacaaagactagacgtctaaaaatacttagaaaatcacttgtatatatttactactgacatgagcttagaagcacc  28505100      <---------GLK1(2)    --------->AHL20(2)    <---------AHL20(2)   --------->AHL20(2)                              --------->AHL20(2)     ----------->GT1        <---   <---------AHL20(2)                            --------->AHL20(2)--------->CCA1(2)             <--- --------ATHB12     --------->TOE2(2)  --------->ZAT14           <<<<<<<<<RAP2.2          <---------ZAT6 ---->RAV1(1)       --------->TOE1(2) <-----------RAV1(1)   <----------DOF2          --------->TOE2(3)   actaattaaattctctataaaacataagagagtctaaacactgtggtagaaaaaaatatagacttttagatatgtgtagtaaaataacattagtgttaac  28505200                                                            <----------DOF2                                                           <---------ANAC58                                        ===============HOX2a_HOX2a                                        <------ZmHOX2a(2)  <---------ANAC58                                  <---------AtLEC2   <---------DAG2                       --------->MYB46(3)                               --------->At5g28300   <----------DOF2                      --------->REM1(1)         <---------MYB52(1)   <---------ANAC46  ------>ZmHOX2a(1)            <-----------------AGL1   <-----------GT1         --------->GLK1(2)  <---------ANAC58               <---------HSFB2a(2)    < ------DAG2               <---------GLK1(2)   ----------->RAV1(2)     <-------TEIL      ============= -------DOF2           --------->MYB46(3)     <---------ANAC58       --------->GLK1(2)  ----------->RAV1(1)   tttattttccagttatttcatatcaacagatgctgtgaatggatcatttcctgcgcttttggcttttggagattcaattctcgatactggcaacaacaat  28505300                                                                        --------->CCA1(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                       --------->ARR11(1)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                      <---------HSFB2a(1)                        <---------ARR14(2)                           ----------->ARR10                        --------->ARR11(3)                         <------ZmHOX2a(1)             <---------YAB1                                     <-----------RAV1(2)        <----------DOF2 <---------ARR11(3)                     <------NtERF2    ------>ZmHOX2a(1)   --------->ARR14(2)                    ------>NtERF2  ----------->RAV1(2)  --------->CCA1(1)                      ----------->RAV1(1)  <---------At4g35610  --------->RVE1(1)                     ----------->HVH21 -----------GT1---------->DOF2                               --------->ETT(2) =============RAV ----------->GT1        <------ZmHOX2a(1)   <---------ETT(2)   tttctcctgacttttatgaaaggaaatatctggccatatggaaggagtttcagcatgagaagggcgacaggaagatttggaaatggaagagttttctctg  28505400               --------->YAB1              <---------YAB1                                                                    <----             <-----------GT1                                                                    <----            --------->YAB1                                                                     <-----           <---------AHL20(2)                                                                --------     <------MYB46(1)               <----------DOF2                                          ---------     <------MYB83  <---------AHL20(2)         ------>ZmHOX2a(1)               --------->YAB1---------     ----------->GT1    <-----------GT1      <---------MYB59     <---------CCA1(2)     <---------YAB1   atatagttggtatattatcattttttttacaatgcttctttgtatttcctaatttttctcatattgcatagcttagaaaatcatatggtatgaataatat  28505500                               ----------->HVH21                             <---------At4g35610                             --------->At4g35610  <---------YAB1             <---------ZAT2 -----YAB1                   --------->ZAT2 -----AHL20(2)        <-----------GT1                    <-----------GT1                       ------ ----AHL20(1)        <---------YAB1                  <-----------ARR10<---------MYB52(1)       ------ ->AHL20(1)        --------->YAB1                    --------->ARR11(3)                  --------->ANAC46 >AHL20(2)         <---------ICU4            <------ZmHOX2a(2)      --------->YAB1       --------->O2 >YAB1            <---------YAB1  <---------TOE1(3)  <---------ARR11(3) --------->MYB52(2) ----------   tattctgatatagtaagtttattattactacagctgaaggtttagggatcaagaagattttaccagcttatcgtaagttgttcaattctccaagtgacct  28505600  Previous    Next  AGI:  At1g75900.1    Description:  family II extracellular lipase 3 (EXL3). similar to family II extracellular lipase 1 (EXL1) [Arabidopsis thaliana] (TAIR:AT1G75880.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO60949.1); contains InterPro domain Lipase, GDSL, active site; (InterPro:IPR008265); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 28502721    to: 28504799    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g75910.1    Description:  EXL4 (extracellular lipase 4); acyltransferase/ carboxylesterase/ lipase. similar to family II extracellular lipase 5 (EXL5) [Arabidopsis thaliana] (TAIR:AT1G75920.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO60951.1); contains InterPro domain Lipase, GDSL, active site; (InterPro:IPR008265); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 28505095    to: 28506944    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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