Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------ICU4 ---->ICU4 -----YAB1            --------->ATHB12                  --------->YAB1 -->YAB1             <---------YAB1       --------->AHL20(2) --YAB1          <-----------GT1     ----------->GT1   <---------YAB1    --------->ANAC46          <-   aattagcttatatagatttatacatgatagggtttcagagagaaaaaaatacgacttatgaaaatatagccatacccacaagaagtgtaacccaaattca  28489200                                                            --------->LBD16                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                       <---------GLK1(1)                                                       --------->GLK1(1)                                  <---------ARR14(2)--------->ANAC46                          <------                                  --------->ARR14(2)--------->ANAC55(2) --------->YAB1       --------                                  --------->GLK1(2) --------->ANAC58   <---------ATHB12      --------           --------->AHL20(2)     ------->TEIL      --------->ANAC58 --------->WOX13(1)  --------->ANAC58 --------ICU4           --------->LBD16           <-----------GT1  <---------ATHB12      --------->ANAC58   aagattactacattgaaataagtttccccaaaaacgaatccaaaatcaggttttacgaaatccgtagaaatcaatcacacaaaaaaaactgaagcaagaa  28489300               <---------MYB52(2)               --------->MYB46(3)                           <---------ANAC58    ------>ZmHOX2a(2)                                       <---------ANAC46   <------ZmHOX2a(2)                                        <---------ANAC58  <---------ARR14(2)                                       --------->MYB52(2)  <---------AGP1                                     ------->MYC3  --------->AGP1------->GAMYB                        <-------MYC3  --------->ARR11(3)--------->TOE1(3)               --------->O2                               ------  --------->ARR14(2)--------->TOE2(3)               <---------O2                               ------  <---------ARR11(3)--------------------->WRI1    ------>NtERF2                                ------ <---------CCA1(2)------->TEIL                   --------->DEAR3(1)                         --------- ---MYB52(2) --------->MYB52(1)               --------->ANAC46               --------->ALFIN1 ------- ->ANAC58--------->At4g35610                  --------->ANAC58               <---------ANAC46-------- ->ANAC58<---------At4g35610                  --------->ANAC58--------->AtLEC2<---------MYB46(3)-----   accagatctgtagctcaacgaaccttagtcgattcgaccaagttttgaacgccaacgtggtttcttgcaaacacaagcggtgggcaagtgagaacgcgcg  28489400                                                                                   <---------------AGL15                                                                                   <---------MYB59                                                                                   --------------->AGL15                                                                                   --------->TOE2(3)       --------------------->WRI1                                                  --------->TOE1(3) --->ANAC58                 --------->MYB59                                        ================== ----->HVH21           <------ZmHOX2a(1)                                     --------->ANAC46 ------- --->ANAC58          <---------TOE2(2)               <-----------GT1         --------->ANAC58 ------- >TOE1(2)            <---------TOE1(2)             <---------MYB52(2)        --------->ANAC58 <------ -->LBD16    ------>ZmHOX2a(2)                     <---------ATHB12       <-------TEIL    ----------- ->ANAC46    =================HOX2a_HOX2a  --------->MYB46(3)    --------->At4g35610   ---------->DOF2 ------>RAV1(1)  <---------ATHB12        <-----------GT1     <---------GLK1(2)   -------->P  <-------   acatattttctctgatccaatcgaaggatttaggtctcgattctaacaatccaattaacccaagattagcttcagattcaagcaacctaaaaaggaataa  28489500              --------->At4g35610              --------->ZAT2              <---------At4g35610          --------->LBD16         --------->O2                           --------->TOE2(3)    <---------At4g35610       ------->GAMYB                            --------->TOE1(3)    --------->At4g35610 ===============================================MADS_MADS         ---------->DOF2 -->KAN4(1)   <---------ZAT2        <---------LBD16     <---------ARR11(3) -->ICU4<---------LBD16           <---------ARR14(2)    --------->GLK1(2) ---KAN4(1)<---------MYB52(1)     --------->ARR14(2)    --------->ARR11(3)      <---------ANAC46 >GT1-------->P               ----------------->AG     --------->RVE1(1)       --------->ALFIN1 --KAN4(2)<-----------HVH21 -------->P--------->LBD16  --------->CCA1(1)     --------->ALFIN1   -----   tcgagacaaccccgtgagctcgatttcgctaacccaaatccggagataaaccctaaaaaatctcgacctagagcagacagtgagggggagaagatagcta  28489600                                                                             <---------HSFB2a(2)                                                                            <---------LBD16                                                                         ------>MYB46(1)                                                                         ------>MYB83                                                                       --------->MYB46(3)             --------->AHL20(2)                                        ------->GAMYB      <---------ANAC46                                                 --------->DEAR3(1)      ----------->GT1                                                  --------->DEAR4(1)     <---------AtMYB61                                                 --------->DREB2C(2)     --------->ALFIN1                                                 --------->DEAR3(2)   --------->ALFIN1                                                --------->MYB46(3)  <-------MYC2                                                    <------ZmHOX2a(2)  ------->MYC3                                                    --------->CCA1(2)  <-------MYC3                                                   <---------ARR14(2)         <--------  ------->MYC2                   --------->MYB59                 --------->ARR11(3)    <-----------HVH21 <---------ANAC58              <--------P                        <---------ARR11(3)   <---------DEAR3(2) <---------ANAC58          <---------ANAC46 <---------AHL20(2)   --------->AGP1       <------MYB83 <---------ANAC46    --------->DAG2       <-----------TBP        --------->ARR14(2)   <------MYB46(1) ----->CDC5 *TSS    ---------->DOF2  <-------TEIL              ----------->ARR10---------->DOF2   agcgcgtgtggtgaataaaaaaaaaagtgaagggtaaggtccatatttatagacgcttgagagttgagatccaccgactcgggaaagtcggtcacattga  28489700                                                       ----------->GT1                                                     <---------ANAC46                                                <---------ANAC58                                                <---------ANAC58         <---------TOE1(2)                    --------->ARR11(3)      <---------ANAC58                   --------->AHL20(2)           --------->AHL20(2)      <---------ANAC58   ---------->DOF2<---------ATHB12       ----------->GT1 ----CBF<---------MYB52(1)        --------->ZAT6<---------ANAC46  <---------AHL20(2)        <--------   aggtgttttcgtaagttcacattagagaaaaggaaaacactaatcaaatatcgtggagggtatattagtaaattacatagacgactactggctcggtccg  28489800                                                          --------->YAB1                                     <-----------GT1   <---------------AGL15                                 <----------DOF2       ==============================================                              --------->ARR11(3)       --------------->AGL15                              <---------ARR11(3)<---------DAG2                          ---------->DOF2    >>>>>>>>>WRKY18 <---------ICU4                <---------TOE2(3)                        --------->HSFB2a(2)  <---------WRKY18(1)                    <----------------     <---------MYB52(1) <---------HSFB2a(2) --------->WRKY12--------->ICU4          <---------MYB59 ---HVH21    --------->ARR14(1) <---------DAG2  <----------DOF2         ----------->GT1   *TSS ------   agtctccgatatttgatacggtttttctaaaagaccttttcaccccttgacttttttctctaataagtacaagatggaaacataggcctaattttggtta  28489900                                    --------->LBD16                                --------->ARR14(2)                                <---------ARR14(2)                              <---------HSFB2a(2)                         <---------ALFIN1                                       --------->HSFB2a(2)         <---------GLK1(1)  <-------MYC3                                <---------ANAC46 =MADS_MADS        ---------->DOF2 --------->ANAC46                     <---------ANAC58 -AGL3   --------->GLK1(1)  ------->MYC3--------->ZAT6                  <---------ANAC58  ------->TEIL --->ATHB12   ------>ZmHOX2a(1) ------->TEIL ---------->DOF2          ------>NtERF2      <---------CCA1(2)   ttgggcattagaattcctcttaaaagcccacatgtatccgaaacactaaaaggcccgttctcgtcgaaacgatgccttggttttggaagttgtatctcat  28490000                              <---------KAN4(1)                       ------->TEIL                       <---------ARR14(2)                  <-------GAMYB--------->KAN4(2)                 <---------MYB46(3)   <---------CCA1(2)                                           ---                 --------->MYB55(2) <---------ANAC58                                             <---                 --------->MYB52(2) <---------ANAC58                                             ----   <---------ANAC58    --------->ARR14(2)                       <-----------GT1       --------->ANAC58   <---------ANAC58   <---------CCA1(2)                    <---------YAB1             --------->ANAC58   cagtttcttacaaacgcgtttgttgtatctgaacattcgcgtctctatgtttcatacatttctgattttccctataagttcaatacactagcaacgtcga  28490100  Previous    Next  AGI:  At1g75860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20100.1) Range:  from: 28487824    to: 28489612    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g75870.1    Description:  unknown protein Range:  from: 28489890    to: 28491054    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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