Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->At4g35610                                               <---------ZAT2                                               --------->ZAT2                                             <-----------RAV1(2)                                        --------->GLK1(2)                                          --                                        --------->ARR14(2)                                      <----                                        <---------ARR14(2)                                     ------       <---------ANAC55(2)              --------->ARR11(3)                                     ------       --------->ANAC55(2)              <---------ARR11(3)    ------>ZmHOX2a(2)                <-----   ----------->RAV1(1)         ------>ZmHOX2a(1)    --------->TOE2(3)        >>>>>>>>>RAP2.2   <-----  --------->MYB46(3)          --------->TOE1(3)----------->RAV1(2)        <---------CCA1(2)  -------- -------ATHB12                --------->TOE2(3)<---------At4g35610      --------->YAB1  ----------->GT1 >AtLEC2        --------->AtLEC2 ---------->DOF2  ------>NtERF2 ---------->DOF2         <----------ID1   atcaacaacaggtaatccatgcctactctcatccttaaagaaaatctccagctgcctcaattgatcgaaagctctcatatctaaattagaaggaaaaata  28487200                                                                        --------->ICU4          <---------WRKY45                                         ======================HOX2a_HOX2a ------->YAB1           ------->TEIL                               ----------->GT1 -----ICU4<---------WRKY38(1)                                      ------>ZmHOX2a(2)              <-- --->AHL20(2)      --------->YAB1          <----------DOF2        =======================HOX2a_HOX2a --->ICU4 <---------WRKY12              <---------ARR11(3)        <------ZmHOX2a(2)            <----- ----AHL20(2)    --------->ANAC58       --------->ARR11(3)       --------->ARR11(3)     <---------ZAT2 ----ATHB51      --------->ANAC58   ---------->DOF2              <---------ARR11(3)    --------->ARR11(3) ->YAB1  --------->WRKY18(1)      <-------TEIL                  --------->GLK1(1) <------ZmHOX2a(1)   attagaaactggtcaacacaagcatgaatcgagagattcaaagttctttggcgatggaatctacagagatcgtaatatttctgaggagagagcttggagg  28487300   <---------ZAT2   --------->HSFB2a(1)   <---------HSFC1(2)   <---------At4g35610   --------->ZAT2                 --------->ARR11(3)   --------->At4g35610            <---------ARR11(3)       ------>ZmHOX2a(1)   <---------HSFB2a(1)   <---------ZAT14         --------->KAN4(2)                         ==========   --------->HSFC1(2)    --------->ZAT14        <---------KAN4(1)          ----------->GT1 <------ZmHOX2a(2) -----TEIL          --------->ZAT14             --------->KAN4(1)        ---------->DOF2 --------->At4g35610 ----MYB46(3)       <---------ZAT14            <---------KAN4(2)--------->CCA1(2)     <---------At4g35610   ttcgaagctccgataacatcagagcagagtacttgagaacttctctgagattattcgcgtcctgagagacgaatagaaagaaaatttcatcagatcaaaa  28487400                                                                                           --------->ANAC58                                                                                       --------->ANAC46                <------ZmHOX2a(1)                                               --------->GLK1(2)               ----------->GT1            --------->ZAT18                       <---------ARR14(2)            ------->GAMYB    --------->MYB52(1)                            --------->LBD16 ------>NtERF2         --------->MYB52(1) --------->ARR14(2)                             ------>NtERF2   --------->ANAC46     <XXXXXXXXXXXXXXXXXXXXXMIR4221   ---------->DOF2                      <---------LBD16  --------->ANAC58 --------->At4g35610        <---------ARR14(2)  <---------AtLEC2         <---------LBD16  --------->DEAR3(1) <---------At4g35610       <------ZmHOX2a(1)   <-------TEIL           <---------ARR14(2)------>NtERF2 ======================HOX2a_HOX2a  --------->AtMYB61  ---------->DOF2--------->ARR14(2)--------->LBD16   atgagctaattcaacggaggaaaataagaggaaacggaccaaagcgcgatgcatgaagaaagcgttgtgctggattccggcgattccttccgccagccac  28487500                                                                                          --------->AHL20(2)                                                                                         --------->YAB1                                                                                         *TSS                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                        --------->At4g35610       <---------ZAT18                                                        <---------At4g35610       <---------SPL7                       <---------HSFB2a(1)      --------->LBD16                   --------->ZAT18                 --------->LBD16               <---------ANAC58                 --------->PCF2                 ------>NtERF2                 <---------ANAC58               --------->ANAC46                <---------DEAR3(1)             <---------ANAC46              --------->LBD16---------               <---------LBD16       <<<<<<<<<TBF1  <-----------HVH21       --------->HSFB2a(2)   ------>ZmHOX2a(1)   --------->HSFB2a(1)   ------>ZmHOX2a(1)  <----------DOF2 <---------ZAT18   ttatcctcgtcttctactccggcgagcgttctcatcttcttcttctcctccgtgtgtcagcagtttctttttttttttccagggcgcacgaaaataatag  28487600                              <----------DOF2                             <---------ANAC58                          ---------->ID1    --------->YAB1                                          <                    <---------YAB1       --------->YAB1                ----------->GT1              -                  <---------AHL20(2) <---------AHL20(2)        --------->ANAC55(2)                ---                 <---------YAB1     --------->AHL20(2)         ----------->GT1                    ---                <---------AHL20(2)  <---------AHL20(2)        <---------TOE1(3)                   ---              <---------YAB1 <---------ANAC46                 <---------TOE2(3)----------->GT1    <--           <---------AHL20(2)<---------ANAC58          <---------AHL20(2)    <------------CBF   <---- >YAB1   <----------DOF2<-----------RAV1(1) <---------ICU4   <-----------RAV1(2)                -----   acttccctactcttttatttttatttttgttgcttttattaattcatcatcaaatgtttattttcaggtaattttgtaaaattgtaaaattttagcactg  28487700  <---------TOE2(2)  <---------TOE1(2)  --------->SPL7  ------->TEIL  <-------TEIL                                               <----------DOF2 ---------SPL7                                              ------>ZmHOX2a(2) -------->TOE1(2)                                          <------ZmHOX2a(2) ------------>AtSPL3                    ----------->HVH21 <---------AGP1 ------------>AtSPL8             ------>ZmHOX2a(2)        --------->ARR11(3) ---->TEIL                     --------->ARR11(3)         --------->AGP1 -------------AtSPL3           <---------ARR11(3)         <---------ARR11(3) -----ZAT14               --------->TOE1(2)             ----------->ARR10              <---------TOE2(3) ---->ZAT14               --------->TOE2(2)    --------->ATHB12                  ------>ZmHOX2a(2)   tacgtacgtttttgtttgagagttgaaacatatgatctggctatgacattgatttgaatagatctttagaattggaaacttgatcgattatggaattgaa  28487800                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58                         --------->YAB1                                --------->ZAT14                       ------->TEIL<--------P                          <---------ZAT14             --              <----------DOF2--------->GLK1(2)                       --------------->AtSPL8   <<<<<<<ZML2  <---------ICU4   <---------TOE2(3)       <---------YAB1     --------->WRKY18(1)     ---------->DOF2   ccaagtattacgaagtcttttgatgtatcaaaatcgggttagattagaattgttgttacaaacagtcaaacactgtacaagctaagtctaaagctagaac  28487900                                  ---------->DOF2                                                  <-                               ----------->GT1                                      ------->TEIL  <--                              <---------------AtSPL8                     --------->ANAC46 --------->LBD16                              <---------TOE1(3)                    --------->At4g35610   <---------LBD16    --------->GLK1(2)         --------->DAG2                       <---------At4g35610  <---------LBD16 -------->DOF2                <---------TOE2(3)              --------->DAG2   --------->ICU4<--------   aaaaagaatcgagcattagaacgggacagtataaggtaaagaataaatcccaacttcagacaaaaattgagctctaggccaagatgaatctcccggtctc  28488000                    <---------WRKY18(1)                 --------->TOE1(3)                                            <---------YAB1                 --------->TOE2(3)                                           >>>>>>>>>>>>>>>>>LFY          <---------ICU4<---------ZAT2                                      --------->YAB1          --------->YAB1<---------At4g35610                                 <-----------GT1         --------->ICU4 --------->At4g35610       <---------ANAC58       <---------ICU4       <---------bZIP60(1)                        <---------ANAC46       --------->YAB1       --------->bZIP60(1)             --------->ANAC58                 --------->ICU4 --------ICU4  -------->P              --------->ANAC58         ---------->DOF2 -------YAB1   ------->TEIL  <----------DOF2      <---------ANAC58      <---------ATHB12        <---- ---HVH21<---------YAB1<-----------RAV1(1)------->TEIL     <-----------------AGL1   <---------YAB1   atcatcgtgtcatcatcaaccttgactgctgctttgggcttaagcacctcttgcgtcttgttcccaaatagccaataatcaccattgtcatttgaagatg  28488100  Previous    Next  AGI:  At1g75850.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51310.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60958.1); similar to hypothetical protein OsI_013447 [Oryza sativa (indica cultivar-group)] (GB:EAY92214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48166.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378) Range:  from: 28481429    to: 28487589    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g75860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20100.1) Range:  from: 28487824    to: 28489612    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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