Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->STY1(2)                             <---------AHL20(2)    <---------REM1(1)                             --------->AHL20(2)  <---------ZAT14                          ------>MYB46(1)  <---------At4g35610                       ---------->DOF2                          ------>MYB83     <---------STY1(2)                     --------->YAB1        ---------->DOF2 --------->TOE2(3)  --------->ZAT2                      --------->AHL20(1)    ---------->DOF2     <---------MYB59    <---------ZAT2                      --------->AHL20(2)---- ------ICU4          <-----------GT1      ------>NtERF2    <---------ANAC46   --------->YAB1     <--- --AHL20(2)    ----------->GT1 <-----------GT1   --------->ZAT14       ----------->GT1    -----------   caataccaaagaaagtgaagaaataacctaatttatcaacttgccagctagtgaagtagctccttggaggtttcagtaaaaaataataaaagtcgataaa  28475600                                                                            <----------TaMYB80                                                                            --------->CCA1(2)                                                                            <---------GLK1(1)                                                                            --------->GLK1(1)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)         ------>MYB83                                                 <---------TOE2(1)         ------>MYB46(1)                                              <---------TOE1(1)       --------->MYB46(3)                                          <---------SPL7       <---------MYB59                <---------AtMYB61           <---------ANAC58      --------->ANAC58      <---------AHL20(2)                    <---------ANAC58      --------->ANAC46     <---------AHL20(2)                <---------ANAC58 ----->AHL20(2)            --------->AHL20(2)                <---------ANAC58         <---------ARR11(3) ------AHL20(2)           <---------YAB1        ---------->DOF2  --------------->AtSPL3    --------->AHL20(2) >GT1 --------->ANAC58 <---------YAB1 --------->ALFIN1 <---------ALFIN1   <------ZmHOX2a(1)<---------AHL20(2)   aaaatactacccaacttcatggtttattattaaatgcgatgtggtcgagacaaagtaccacttgagtaccgtactaggatatgctcaacatatttaaaat  28475700                   ------>MYB46(1)                           --------->AHL20(2)                   ------>MYB83                              --------->YAB1                  --------->ANAC58                    <-----------HVH21                             <                  --------->ANAC58                 <------NtERF2                                    -                  --------->ANAC46                --------->MYB52(1)                             ----                --------->MYB46(3)                ------>NtERF2                        --------->At4g35610              <-----------GT1          <---------TOE2(3)    <---------ATHB12           ----------->RAV1(2)     --------->ANAC58     <---------ARR11(3)    --------->MYB46(3)            --------->MYB52(1) ----     --------->ANAC58     --------->ARR11(3)    --------->ATERF1(1)         --------->MYB46(3)   ----   tttgaccaagtcaaattaaccagccagagatgttaacagttaatgtagtagccaccggtccaatgaaattgcaaatgaacaaacgtagcacctgaaaact  28475800                                                       --------->TOE2(3)                                                      --------->ATHB12                                                      <--------HAHB4            <------ZmHOX2a(2)                        <---------ATHB12       --------->YAB1                                <---------YAB1      <------ZmHOX2a(2)    <---------YAB1    <---------ARR11(3)   --------->DEAR3(1)<----------DOF2         --------->ARR11(3)  <------NtERF2  <---------ZAT18         <---------RVE1(1) ------>NtERF2   --------->ZAT14         <---------CCA1(1) ---------ALFIN1 <---------ZAT14        --------->ARR11(3) -------->DEAR3(1)   <---------DAG2     --------->AHL20(1)             <---------ANAC58 ----->ANAC46   <---------ALFIN1        <---------ARR11(3)             <---------AtLEC2            -- ----->ANAC58  <---------At4g35610      <---------AHL20(1) --------->At4g35610  --------->ARR14(2) <- ----->ANAC58  --------->At4g35610 --------->WRKY18(1)--------->YAB1   <---------ANAC58         <----   cgccaccgatcacgatcagcacactttttatgaattggtcaagatattatcttctatcattagatgaatacttgcatgttagtattctctactatcagac  28475900                                                               ------>MYB46(1)                                                               ------>MYB83                                                         <---------ETT(2)                                                         --------->ETT(2)       <---------------AGL15                                                --------->ANAC55(1)          --------->ZAT6           <---------AHL20(2)                   --------->ANAC46             <-----------GT1          <---------AHL20(2)                    --------->ANAC58           <-----------GT1       --------->AHL20(2)     <---------DAG2    <---------ANAC55(2)  <--------HAHB4         <--------P       <---------AHL20(2)     <----------DOF2   --------->ANAC55(2)  <---------ICU4         <-------- ------->ALFIN1      <-------GAMYB              --------->ANAC58  --------->ANAC46----------->TBP --------ANAC46     ----------->GT1       --------->AtLEC2   --------->AtMYB61  --------------->AGL15 -----DEAR3(1) <---------AHL20(2)<------------CBF   ---------->DOF2 <---------ATHB12      <---------MYB46(3)   ggtgtgtatttttttatttatagggttgaacgctttattgtcccatgcacacgtaaaagtcgacctccccatcattttttcactataaatagtggttgat  28476000                                                                                          <----------DOF2       <---------GLK1(1)                                                            <---------MYB52(1)       --------->GLK1(1)                                                          <---------ICU4      <---------ARR14(2)                                                  <---------At4g35610      --------->ARR14(2)                                     <---------ICU4   --------->MYB46(3)  <-- -WOX13(1)        *TSS        <-------TEIL                --------->YAB1  --------->At4g35610  xxxxxx   ttcaagcagatttcttcaaactaaaacatatatacatcgaaaacaactaagtataaacaatagtcatggctaagtctgctaccatcgttactcttttctt  28476100                                                                                                   --                                                                                            <--------                <---------At4g35610                                                  <----------DOF2               <-----------RAV1(1)                      <---------AtLEC2     --------->TOE2(3)    <--             <----------DOF2       --------->YAB1    ------->MYC3            <---------DAG2 --------- -------At4g35610  <---------At4g35610     <---------ANAC46----------->GT1<-----------GT1   --------- xxxxxxxxxxxxxx>smallRNA(s2)      --------->ICU4     <-------MYC3        <-----------GT1    <--------   cgctgctcttgttttctttgctgctcttggtgagtaatgatgttatcgtataccatatgcatggaaaattgagttttaaccttttttctttcattttatt  28476200       <---------At5g28300      --------->MYB52(1)     <---------AHL20(2)     --------->AHL20(2)  <---------ICU4                  --------->ANAC58 <---------YAB1         <---------------AGL15 <---------MYB46(3) --------->ICU4      <---------ARR11(3)      <---------AtMYB61                          <---------SPL7 ------->YAB1        --------->ARR11(3)      --------->ALFIN1                     <---------PCF2 -AHL20(2)          <---------CCA1(2)      <---------MYB46(3)                  --------->ALFIN1 -------YAB1      --------->CCA1(2)       <---------AtMYB61                  --------->O2           < >AHL20(2)       --------->ARR11(3)    --------->DEAR3(1)                    <---------O2 <---------LBD16 >AHL20(1)       <---------ARR11(3)<---------ABI4(2)                         --------->TGA1a       <- -AHL20(1)<-----------HVH21       --------->ANAC58                           <---------TGA1a---------   gtgataattaactgtgagagatatatctatatgcagaagcaccgatggtggtggaagcacagaagttgtgcgagaggccaagtgggacatggtccggagt  28476300                         <---------ICU4               ------->MYC3               <-------MYC3               <-------MYC2  <---------ZAT18               ------->MYC2  <---------ZAT14             <---------AGP1              >>>>>>>>CAMTA3 --------->ZAT14             <---------ARR14(2)              <---------ANAC58                           --------->ARR14(2)                ------->TEIL              <---------ANAC46                           <---------ARR11(3)                --------->ARR14(2)            <---------ANAC46 --------->ZAT18             ------->TEIL                      <---------ARR14(2)   <---------ARR14(2)  --------->GLK1(2)         --------->ANAC58                         <---------CCA1(2)   --------->ARR14(2) --------->YAB1             --------->ANAC58                <---------ZAT18 --------->LBD16    --------->ANAC58       ---------->DOF2 ------>ZmHOX2a(2)   <---------ZAT2 ---------ANAC46    --------->ANAC58 --------->TOE1(3)   --------->ARR11(3)    --------->ZAT2 --------LBD16<---------ANAC58       --------->TOE2(3)  <---------CCA1(2)      <---------At4g35610 >LBD16    <-----------------------TaNAC69(2)    --------->ANAC46              --------->At4g35610   ttgcggaaacagtaacgcgtgcaagaatcagtgcattaaccttgagaaagcacgacatggatcttgcaactatgtcttcccagctcacaaatgtatctgc  28476400                                                                                                    -                                          --------->DAG2                                        -----                     <---------ARR11(3)  ---------->DOF2                                       <-----               -------->P             --------->YAB1                   <-----------HVH21    ---------     <---------TOE1(2)                --------->AHL20(2)   <---------AHL20(2)         <---------ARR11(3)     <---------TOE2(2)               <---------YAB1       --------->AHL20(2)          --------->ARR11(3)   tacttcccatgttaatctaccaagagctcttaatgcttaattataaagtgtgtatttctattaaataagtatgtgtcactctatgagaggtcttatgaca  28476500  Previous    Next  AGI:  At1g75830.1    Description:  LCR67/PDF1.1 (Low-molecular-weight cysteine-rich 67). Identical to Cysteine-rich antifungal protein 1 precursor (AFP1) [Arabidopsis Thaliana] (GB:P30224;GB:Q42179); similar to PDF1.3 (plant defensin 1.3) [Arabidopsis thaliana] (TAIR:AT2G26010.1); similar to putative plant defensin PDF1.4 [Arabidopsis halleri] (GB:AAY27739.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 28476018    to: 28476552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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