Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ZAT6                        <---------YAB1                    --------->ANAC55(2)          --------->ARR14(2)          <---------ARR11(3)                                                              -----------          <---------ARR14(2)  <---------At4g35610                  ------>ZmHOX2a(1)  ----------->GT1          --------->ARR11(3)  --------->At4g35610        --------->TOE2(3)           --------->DAG2  <----------DOF2   <---------ANAC55(2)               <---------CCA1(2)             ---------->DOF2<-   tagacttttgaagttcttcatcacttattgttagatgaaacaacaacgttgcattcaaatctcaaattcctataaatcacagataaaaaagtaattttgt  28462000                              --------->ANAC58                              ----------->GT1                                    --------->ANAC55(2)                              --------->ANAC55(1)                              <-----------GT1                              <---------ANAC55(2)                            <---------DAG2                              --------->ANAC58                          <------ZmHOX2a(2)            <---------MYB46(3)--------->O2                             --------->AGP1            ----------->GT1   --------->ANAC46                         <---------ARR11(3)         <---------ANAC46     --------->ANAC55(2)      --------->GLK1(2)--------->CCA1(2)   --------->ANAC46           <---------bZIP60(1)      --------->ARR11(3)------>ZmHOX2a(2)        ---   <---------O2               --------->bZIP60(1)     <---------GLK1(2)--------->ARR14(2)         <--   --------->O2            <---------ATHB12       ---------->DOF2      <---------ARR14(2)   <--------   --------->ANAC58      <---------ICU4       ----------->GT1          <-----------ARR10   <---------ARR11(3)   --------->ANAC58 <---------ARR14(2)      ---------->DOF2            --------->ARR11(3)  --------->ARR11(3) ------------>TaNAC69(2)------>ZmHOX2a(1)   --------->ZAT14        ---------->DOF2    <---------ANAC46 ----------GT1      --------->ARR14(2)   ----------->GT1   ----------->GT1   <----------DOF2<--------   tttacacgtctacgtggttacaaatcctaatcacgtaactaaacagtaaagttaaagaatcttgaaaaataaagatctactttacgttttgtagatattt  28462100             --------->TOE2(3)            --------->ANAC58            --------->ANAC58    ---------->DOF2                                                                  <XXXXXXXXXXXXXXX  <---------AHL20(2)                    --------->AHL20(2)                         <-----------GT1  --------->AHL20(2)                 --------->TOE1(3)                            --------->AHL20(2) ------>AHL20(2)    ----------->GT1  --------->TOE2(3)--------->YAB1             <---------AHL20(2) -------AHL20(2)   --------->DAG2   ----------->GT1  <---------ATHB12      ----------->GT1    <------ -RVE1(1)  ------->TEIL       <---------RVE1(1)    --------->WOX13(1)     <---------ZAT6  <---------AHL20(2) -CCA1(1) <---------DOF5.7(2) <---------CCA1(1)  <---------YAB1     <---------------AGL15 --------->AHL20(2)   ttaattaaaagtgaacgtcaaaaggtaattggatattttcgttaaaatgttatcaatcaaactcggacaacaattagtggtaatttaactatttaaaaac  28462200                                                                                  <----------DOF2                           -------->HAHB4                                        <---------ANAC58                           --------->YAB1                                        <---------ANAC58                           <---------ICU4                                       <-------TEIL                          --------->ICU4                                     <---------At4g35610   --                          <---------ATHB51                 <-----------GT1 <-----------RAV1(2)     --                       --------->ICU4             ----------->RAV1(1)   --------->YAB1         ------    -------->P      <---------ZAT6               <----------ID1     <---------AHL20(2)      --------- XXXXXMIR869.2  <---------ZAT14              --------->AHL20(2)    --------->AHL20(2) --------->TOE2(3) -----GT1    <---------ANAC46          ------->TEIL       --------->AHL20(2) --------->At4g35610  ---   cagactaacccattatcgtatagtgctaattatgaactatgaaccgattaaacaacaaaatttactatataaaatcatcaggtgcttttcttaatctcaa  28462300                                                              <---------ALFIN1                                                             ------>MYB83                                                            ----------->RAV1(1)                                                           ------->GAMYB                                                           --------->AtMYB61                                                          <---------MYB55(2)                                                          <---------ATHB12                                                          <---------MYB52(2)                                                          --------->MYB46(3)                                                         -------->P                                                         --------->ANAC58                                                         --------->ANAC58                                                       --------->MYB46(3)                                                       <---------MYB55(2)                                                       <---------MYB111(2)                <------ZmHOX2a(1)                                         <---------SPL7<---------MYB46(2)                ----------->GT1                                        <---------ANAC58 ------>MYB46(1)              ------->GAMYB                                        <---------ANAC58--------->MYB55(1)          ------>MYB46(1)                                       --------------->AtSPL3------>MYB46(1)       ----------->RAV1(1)                                   --------->At4g35610 --------->AtMYB61           --------->MYB52(1)                              --------->O2 --------->SPL7------>MYB83             --------->AtMYB61                              --------->ANAC58         <---------MYB111(1)        --------->MYB46(3)      --------->AHL20(2)      --------->ANAC55(2)    -------->P            --------->GLK1(2) ------->At5g28300            --------->ANAC46    --------->At4g35610     --------->ARR14(2) --------->GT1                --------->bZIP60(2)--------->ANAC58         <---------GLK1(2) --->MYB52(1)                 --------->ANAC58   --------->ANAC58   --------->ANAC46------>MYB83 >TOE2(3)  <-----------GT1    --------->ANAC55(1)--------->ANAC46  <-------TEIL  --------->MYB46(3) -------->GT1  --------->WOX13(1)  <---------At4g35610--------->MYB46(3)  <---------ARR14(2)  -------   cggttaaaaaaaataaccaattagatgtgtccacgtaagcaggcgtaccataagctaccaaccaacacatacaccagattctcaccaacagaggaaaaaa  28462400                                                       <----------DOF2                                                 --------->ARR14(2)                                             --------->YAB1                                    <----------DOF2  ------>ZmHOX2a(1)              --------->ANAC58<---------CCA1(2)  <---------ARR14(2)                              >>>>        ---------->DOF2 <<<<<<<<<TBF1      *TSS <---------GLK1(2)                             >>>>>>> --->DOF2     --------->ANAC58<---------At4g35610--------->GLK1(2)     --------->YAB1  ---------->DOF2   gcttctactataaagcacacatcttcttcttcatctctctttcgctctcagaatcctcttttaagtctctgtttcataaataaaactaataaagaagaag  28462500                                                                           <---------CCA1(2)                         --------->ARR11(3)                               ------>ZmHOX2a(1)        <-                         <---------ARR11(3)                          ------>ZmHOX2a(2)             <-                        <---------CCA1(2)                          --------->ARR11(3)              --                     ------>ZmHOX2a(1)                    <---------MYB52(1)<-----------ARR10      <-                    --------->TOE2(3)                    <---------At4g35610<---------ARR11(3)    <--              ---------->DOF2                            <-------GAMYB   <---------ANAC58       <----             --------->AHL20(2)                         <---------ANAC58 --------->TOE2(3)      ----- >>>>>TBF1   --------->YAB1                             <---------ANAC58 <---------ANAC58    -------- >>TBF1   --------->WOX13(1)    <<<<<<<<<TBF1      <----------DOF2 <---------ARR11(3)    <---------MYB46(3)   aagaaaacagagcaattaaagtccttaaatcttcttcttctccaattcaatggctcttccgttgccattgatcttccttatcttctctcatttgttcgtt  28462600        <---------HSFB2a(1)        --------->HSFC1(2)        <---------HSFC1(2)        --------->HSFB2a(1)       <---------ARR11(1)       ------->TEIL       --------->GLK1(2)       <-----------ARR10       --------->ARR14(2)       <---------ARR14(2)    --------->ANAC58    --------->ANAC58                  <---------WOX13(1) --------------AtSPL3                 <---------YAB1 --------HSFB2a(2)                  --------->ATHB12 ------->HSFB2a(2)                 --------->ICU4                  <---------TOE1(3) --------------AtSPL8      --------->TOE2(3)                       <---------TOE2(3)           ------ -------ANAC46             <----------DOF2 -------->HAHB4  <---------YAB1                 <------ZmHOX2a(2) -----ARR14(2)        <------ZmHOX2a(2)    --------->YAB1<---------At4g35610           --------->MYB59 ---->ARR14(2)  =============HOX2a_HOX2a--------->YAB1  <---------YAB1            <------ZmHOX2a(1) < ->MYB52(2)     ------>ZmHOX2a(1)  <---------YAB1 <---------YAB1<---------AHL20(2)===============HOX2a_HOX2a   tctggtacgaatcttctcctatagatcaactttagttatgattaataatactgtgattctgatgattttatggttttataaacaggagttagatcaacga  28462700                                                                                  <---------GLK1(2)                                                                                  <---------ARR14(2)                                                                             --------->MYB52(1)                                                                           --------->ETT(2)                                                                  <---------ALFIN1--------->ARR14(2)                                                           <---------GLK1(1)------>NtERF2                                                           --------->GLK1(1)<---------SPL7    <---------ICU4                 <---------ANAC58     --------->LBD16    --------->MYB46(3)      <-   --------->ICU4                  <---------ANAC58   <---------LBD16      --------->DEAR3(1)    ----   <---------YAB1                  <---------ANAC46 --------->ANAC46       <---------ETT(2)     ----- ->GAMYB              <---------ARR14(2)            ------->GAMYB --------->AtMYB61 <-------TEIL----- -------TEIL          --------->ARR14(2)  <----------DOF2<------NtERF2     ----------->HVH21   ------   gcttcattatggtgaacaaatgcgaatacacagtctggcctggacttttatcaaacgccggagttccaccacttccgacgaccggattcgttctccaaaa  28462800                                                                               ----------->GT1                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                            --------->MYB52(1)                                                                           --------->DEAR3(1)                                                 <---------ANAC46         --------->DEAR3(2)                                               <---------LBD16           ------>NtERF2                                              <-----------RAV1(1)       <---------ALFIN1                                           --------->GLK1(2)          <-----------HVH21                                          --------->ARR11(3)         --------->ANAC46                                          --------->ARR14(2)         --------->DEAR4(1)                                          <---------GLK1(2)          ------->GAMYB                                          <---------ARR14(2)         --------->At1g77200                   <---------ZAT18       --------->HSFB2a(1)         ----------->HVH21 ----------------------TaNAC69(2)        --------->HSFC1(2)          --------->DEAR3(1)             - ----->DAG2      --------->At4g35610     <---------HSFB2a(1)         --------->DREB2C(2)          <-- ----->DOF2    --------->YAB1            <---------HSFC1(2)          <---------ETT(1)          ------ ---->DAG2  --------->WOX13(1)          ----------->ARR10           --------->DEAR3(2)       -------- ---->DOF2 --------->MYB46(3)         <------ZmHOX2a(1)             --------->MYB46(3) <-----------GT1   aggcgaagaacgaacaatcagcgctccaacttcatggggaggaagattctgggggagaactcaatgttccaccgacaccgacggaaaattcacttgtctc  28462900  Previous    Next  AGI:  At1g75800.1    Description:  pathogenesis-related thaumatin family protein. similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT1G20030.2); similar to pathogenesis-related thaumatin family protein [Brassica rapa] (GB:ABV89616.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 28462443    to: 28464515    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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