Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->ANAC46                                                        <---------LBD16                                                       <---------LBD16                                                --------->ARR14(2)                                               <------ZmHOX2a(1)                                             <---------TOE1(3)                                    <-------GAMYB    --------->WRKY18(1)                                   <-----------RAV1(1) <-----------RAV1(2)                                   ================================RAV                              -                        --------->ARR11(3)   <---------TOE2(3)              <---------YAB1  <--------                       --------->YAB1    <----------DOF2--------->LBD16   --------->ZAT6  <---------RVE1(1)              <---------DOF5.7(2)<---------At4g35610<-----------HVH21 --------->WRKY38(1)--------->ARR11(3)            --------->DOF5.7(2) --------->MYB52(2)------>ZmHOX2a(2) <-------GAMYB        <---------ARR11(3)           --------->TOE2(3)  <---------MYB52(1)<---------ARR14(2) <---------ANAC46      <---------GLK1(2)   aaattgttgaaaatgttaacgacaatgatatcgtttgctgttgcattaaggatcggtccagggaacatgtcgttgatcactataacctatagattttttt  28460800                                                                      --------->YAB1                                 <---------At4g35610                  ----------->GT1                                 --------->At4g35610                 <---------YAB1                                ------->TEIL                      <---------AHL20(2) ---------->GT1              --------->AtLEC2                     <---------YAB1                ----- -AHL20(2)            <---------WOX13(1)              --------->At4g35610      --------->AHL20(2)   tttggtgaatactataacctatagattgatcatgcatctgaaatttcatataagatagctaaaaccatattattgtaacaaataaaaacatattcaaatg  28460900                    ------>NtERF2                  <---------ANAC58                  <---------ANAC58             <-----------RAV1(1)             <---------MYB46(3)           <---------ANAC58                 <---------ANAC55(2)           <---------ANAC46                 --------->ANAC55(2)                 --------->ANAC58       <---------ANAC58                     --------->ANAC46                    --------->ANAC58       <---------ANAC58   --------->YAB1 <---------ARR14(2)             <------MYB83<---------CCA1(2) ---->YAB1 <---------ANAC58              --------->ARR14(2)             <------MYB46(1)   aaaatggttacctgcttgttgcctccaagaatgaaacgttgagaatacgagacgacccattgatacgatgagattggtgcaaacgcatagctcaactcca  28461000                      <---------ALFIN1                     ------>MYB83                                                            --------            <------ZmHOX2a(2)                                                         ----------->GT1          <---------GLK1(1)                                     <---------TOE2(3)     <---------ANAC46     ---------->DOF2 ------>MYB46(1)                   ----------->GT1         <---------ANAC58 >>>>>>>>>>WRKY26    -------->P---------->DOF2     ---------->DOF2             <---------ANAC46     < >>>>>>>>>>WRKY38  --------->AtMYB61           <---------HSFB2a(2)             <---------ANAC58    -- >>>>>>>>>>WRKY43 --------->MYB46(3)           --------->HSFB2a(2)           <---------YAB1 ---------   agatgaccaaagagatcagaaccaacacctcgacaaagacatgtctcatcgcgaaaagagtgatttaagaaattttaagatgcttgtgatgtgaaaaaga  28461100                                                      --------->ANAC46                                               <---------AHL20(2)                                              <---------AHL20(2)                                             <---------AHL20(2)                          --------->MYB52(2)                                          --------->AHL20(1)                             *TSS                                          --------->ARR11(3)                           <---------MYB52(1)                           <<<<<<<<<<GT-3b--------->AHL20(2)                        <---------TOE2(3) ->DAG2             <-------TEIL          <---------AHL20(2)                        <---------TOE1(3) -----------HVH21--------->At4g35610      <---------AHL20(1)                       <---------DOF5.7(2) ------->ALFIN1 ------->TEIL   <----------DOF2--------->AHL20(2)                 --------->DOF5.7(2) ->DOF2      <---------ANAC55(2)          <---------ARR11(3)       <-----------GT1 --------->MYB52(1)   ggtgttagaggcaagacgtagctacatatttttctttggaacaatatattaattagacgacaactattgttactctgtttggagttaacgtttgttttgt  28461200                              ------------>CBF                             --------->ANAC58        <---------AHL20(2)                             --------->ANAC46     ------>MYB83<---------At4g35610                             --------->ANAC58     ------>MYB46(1)         <----------DOF2                          <-------TEIL          --------->TOE2(3)      ---------->ID1                      --------->DAG2            <---------MYB59<---------ALFIN1          <---------ANAC58                     ---------->DOF2          ------>MYB46(1) --------->At4g35610        <---------ANAC58                  ------>ZmHOX2a(2)           -------->P      <------NtERF2  ----------->GT1        <              <---------YAB1 --------->AtLEC2 ------>MYB83   ----------->RAV1(1) --------->AHL20(2) -   gctatgttttttgaatatgatcgaaaagttcatgcaatctgcatttccaacctaatttatgggcagcacatttgtgcttttgttaaaatttgctgggctt  28461300                                   <---------ARR11(3)                                               -                                   --------->ARR11(3)                                               <       --------->ANAC46           --------->RVE1(1)                                                 -     <-----------GT1          --------->AHL20(2)        --------->ANAC58                            <     <---------YAB1  ---------->DOF2      --------->YAB1--------->ANAC58      <------ZmHOX2a(1)  ----  <---------YAB1    ---------->DOF2--------->AHL20(1)<---------SPL7   --------->ALFIN1           <--- ---------ICU4   --------->YAB1   --------->CCA1(1) <---------ANAC46 <-----------HVH21      <-------- -------->YAB1 --------->AtLEC2<---------AHL20(2)----------->HVH21  <---------ANAC55(2)     <--------   attcattatactaaaccatgcataaaggcccattaaatatcttattgtaatgtgacggacgaaaaaaaaaacgtgagggaggacgatggcaattgcttac  28461400                                                                                            ---------                 ----------->HVH21                                                          <--------ATHB1       ---------->DOF2                                                                      -------->ATHB1    ----------->GT1             --------->ANAC46                                            <-------- -------->ARR11(3)             <---------REM1(2)                                            --------- ---------ARR11(3)  <---------ANAC58                                              ------->GAMYB -------->AHL20(1)  <---------bZIP60(2)                                          --------->ANAC46 ---------AHL20(1)  <---------At4g35610                                          --------->ANAC58 ----------->AGL15  --------->At4g35610                                 --------->AHL20(1) <---------YAB1 ------------AGL15  <---------ANAC58                                    --------->AHL20(2) <---------ATHB51 -ANAC58   --------->ALFIN1  --------->ETT(2)                          --------->YAB1      --------->ICU4 -ANAC58--------->DAG2       <---------ETT(2)                   ------>ZmHOX2a(1)--------->ANAC58   gatatattgtaaagtggatgtgacctgtctgtctacacaatattacaaagatggtcgctattactcctacaaaaaataatacaacgcaaaacaattattg  28461500                                                --------->TOE2(3)                                             <---------ALFIN1                           ----------->RAV1(1)                                          --------->ANAC58                 <---------ICU4       <----                   ------->TEIL           --------->ANAC58         <-----------GT1     --------->ANAC46                  <---------CCA1(2)       --------->ANAC46      ----------->GT1      --------->HSFB2a(2)       <---------ICU4                  --------->ZAT14         --------->DAG2        --------->ANAC46 >ATHB51     <---------DAG2            <---------ZAT14        ---------->DOF2    <----------DOF2----- -ICU4 --------->YAB1                  <---------ZAT18    --------->At5g28300 <-----------GT1  ------ >ATHB12     <----------DOF2          <-----------HVH21  ----------->GT1 --------->TOE2(3)     ------   aaaaattattcatcacttttgtatctttcaaactttcacagttcacaccacctaaaaaacagtaaaaagtaacaacattatcactttccacaacaaaata  28461600             --------->ZAT14             <---------ZAT14          <---------ANAC46                 --------->ANAC58                 ------>ZmHOX2a(1)      <----------DOF2                      --------->ANAC46               ----------->RAV1(2)  --------->MYB46(3)     ------->TEIL    ---------->DOF2                <-----------GT1 -----ARR11(3)           <-------TEIL--------->ANAC55(2)          <----------DOF2 ---->ARR11(3)       <---------------AtSPL8--------->ANAC58    ---------->ID1 --->CCA1(1) --------->ARR14(2)      <---------ANAC55(2)      <-----------GT1  <---------ANAC46 --->RVE1(1) <---------ARR14(2)     <-------TEIL     ------->TEIL <---------DAG2   <---------CCA1(2)   tctaacaactttgagtatacagaaatgtacatagtacatacgtataagcaaaatgaattttgtttctccttttttttcctggtgtatatcgttgcaaact  28461700  Previous    Next  AGI:  At1g75790.1    Description:  SKS18 (SKU5 Similar 18); copper ion binding / pectinesterase. similar to SKS4 (SKU5 Similar 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G22010.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58001.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) Range:  from: 28458442    to: 28461189    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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