Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC46                                               <---------LBD16                                             <---------ARR14(2)                                             -------->P                                             --------->ARR14(2)                                           <---------SPL7                                          --------->ANAC58                                          <---------ANAC58                                          <---------ANAC58                                          <---------ANAC55(2)                                          --------->ANAC58                                         <-------TEIL                                         ------->TEIL                                         --------->SPL7                                        <---------SPL1(1)                                        --------->SPL1(1)                               <xxxxxxxxxxxx                                       --------->LBD16                                 --------->ANAC58           <---------ANAC58            <---------SPL1(2)                              --------->SPL7           <---------ANAC46            <---------SPL7                               --------->LBD16 ---------MYB46(3)                    <---------ANAC58                              <---------SPL7 ------MYB83                          <---------ANAC58                             --------->ANAC58 ------MYB46(1)                      --------------->AtSPL3                        --------->ANAC58 ------->ALFIN1                      <---------------AtSPL3                       <---------LBD16 --------DEAR3(1)                  <-----------GT1      <---------ALFIN1      --------->ANAC58 --------AtMYB61                   ------------------>SPL14             <---------At4g35610 -----MYB46(3)                   --------->HSFC1(2)  <------NtERF2      --------->At4g35610  <------- ---->MYB55(2)                  <---------TOE1(2)--------->LBD16  ----------->RAV1(2)<---------ALFIN1 -----DEAR3(1)               <---------ANAC46------->TEIL  <xxxxxxxxxxxxxxxxsmallRNA(s)--------->ANAC58 --->ALFIN1<---------ANAC58 ---------->ID1--------->ANAC55(2)    ------->TEIL --------->ANAC58-------   ggtggtgaggctagcgtagcactggcacttgtcgtagtttccgtacgtacccggaggcacacagttgcacctgtagcagcaagtcccgcacgctctgtga  28445600                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                           --------->DEAR3(1)                        <---------ALFIN1                       <---------ABI4(2)                       --------->ZAT14                      <---------ATERF1(1)                ---------->DOF2             ------>ZmHOX2a(1)             --------->HSFB2a(2)      --------->ANAC58           ---------->DOF2       ------>NtERF2----------->RAV1(2) <---------ALFIN1       --------->ANAC58 xxxxxxxxxxsmallRNA(s2)<---------ZAT14--------->ANAC46         --------->ANAC46             --------- ----HVH21   <---------HSFB2a(2)      --------->ANAC58         --------->ANAC58<---------GLK1(2) ---->HVH21  --------->LBD16      <---------ALFIN1--------->GLK1(2)----------->GT1 <---------YAB1   cacagcctcggcctcctcgaaagcctgcaccgtgctacacacgcactcccacaatctatatatacaagaaagaaaaacacagattattaatctcactcta  28445700                                                 <---------ARR14(2)                                              <---------ANAC58                 --------->YAB1       ------>ZmHOX2a(2)         <------MYB46(1)            <---------ARR14(2)         ----------->GT1            --------->ARR14(2)         <------MYB83               <---------ARR11(3)        --------->MYB59         <---------At5g28300       <---------MYB55(1)      <<<<<<<<<GT-2  <---------ANAC46     --------->TOE2(3)         <-----------GT1<---------ANAC55(2)     --------->TOE1(3)      <---------ICU4    --------->ANAC46   <---------TOE1(3)       --------->AHL20(2) <---------ANAC58   <---------TOE2(3)       <---------AHL20(2) --------->ANAC55(2)                        <---------REM1(1)  <-----------GT1--------->AHL20(2) --------->ARR11(3)                               <---------YAB1  <---------DOF5.7(2)  --------->YAB1<------ZmHOX2a(2)                           --------->YAB1 >ZAT6<---------MYB52(1)   <---------YAB1 <----------DOF2                  ------>ZmHOX2a(1)   aatttaacgttaggtttaataaaaatcatataattaccgatcttctttgcgtaaccatttttcttctgtgagttttcctgcaagaatattgttgtaacat  28445800                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                     <---------bZIP60(1)                                                                  --------->ANAC58                                                                  --------->ANAC46                                                                  --------->ANAC58                                                                 --------->SPL7                                                               --------->TOE1(2)                                   <---------ANAC46            <---------SPL7                             <---------AHL20(2)              <---------------AtSPL8                             --------->AHL20(1)              --------------->AtSPL3                             <---------AHL20(1)              --------------->AtSPL8                            --------->YAB1                   <---------------AtSPL3                           <---------YAB1                ---------->DOF2   ----------->RAV1(2)                        --------->ICU4 <---------YAB1<---------YAB1  --------->bZIP60(1)   gtgagaaatatgtttttgaaaacataagtattatattgagtataattagtttgtgatgaaaaagacgtacgacatcagcctggacgagttggagaacaag  28445900                                                                                                  <--                                         <---------ATHB12                                      <-----                                         <---------YAB1                                        ------                                         --------->ICU4                --------->ARR11(3)      ------                           <----------DOF2                             <---------ARR11(3)    --------   --------->CCA1(2)    <---------ARR11(3)                       <---------YAB1            <---------ZAT14  <---------ARR11(3)    --------->ARR11(3) <---------GLK1(2)   --------->YAB1<---------At4g35610-----  --------->ARR11(3)   XXXXXXXXXXXXXXXXXXXX>MIR2937           <---------YAB1 --------->At4g35610-----   aagagatatgagaagagaagcgataagagcttttgaaatagccatgattctccaaggagagtttatgatgagagaacttagctcaaatcagactgtaatg  28446000                                               <-----------TBP              ------>MYB46(1)                                             <---------------AGL15          ------>MYB83                                             --------------->AGL15        ----------->HVH21                                            ----------------->AGL2        --------->DEAR3(1)                                            <-----------------AGL2        ------->GAMYB -------YAB1                                ----------------->AGL3       --------->MYB46(3) ----YAB1                      --------->ARR11(3)                        --------->DEAR3(2) ----->GT1                  --------->YAB1  <-----------------AGL3    --------->MYB46(3) --->ICU4                   *TSS        --------->HSFB2a(1)     <---------AtLEC2 ->YAB1                 ------>ZmHOX2a(1)   ========================================================= ---->YAB1              --------->ICU4  <---------HSFB2a(1) <----------DOF2 -------->P --->HAHB4    <---------MYB46(3)        <---------HSFC1(2)  --------------------->WRI1   ataaatgtggttttagttgttgtgtcctaatgagaacttggagggttctatttatagcactcctttggatggacaaccgaccccattttcggtctagact  28446100                                                   <---------ICU4                                                   -------->HAHB4                                                   <--------ATHB1                                                  <---------ATHB51                                                  <---------YAB1                         <---------AHL20(2)       --------->ICU4                 <---------ARR11(3)        --------->LBD16                 --------->AHL20(1)       <---------LBD16                 --------->ARR11(3)  <----------DOF2                --------->RVE1(1)    <---------------AGL15                                         <-            <---------YAB1---------->DOF2<---------LBD16                                      -------            ----------->TBP        <-----------------AGL1                                     -------         <---------AHL20(2)       <-----------GT1 --------->AHL20(2)                     <---------WOX13(1)     <---------AHL20(2)<---------YAB1<---------DAG2--------->ATHB51                    --------->ATHB12 <----------DOF2--------->CCA1(1)<-----------GT1  <---------AHL20(2) <---------YAB1   <---------YAB1 ====================================================MADS_MADS     --------->YAB1   --------->CCA1(2)   attctttttattttataaatatcttattaaaagttttaacttttcagggaaaataattgtttctgagttttataattcaaaatacgatatgattgcaagt  28446200                                                                                                    <                     --------->DAG2           --------->ANAC55(2)       <-----------GT1             -            <---------ANAC46                 <---------TOE2(3)         <-----------GT1              -    ----------->RAV1(1)                      --------->MYB59--------->ATHB12                        <    <<<<<<<<<<<<<<<<<LFY                     <---------TOE1(3)        <---------AHL20(2)           <- ---------DOF2      ---------->DOF2      <---------AHL20(2)<---------ATHB12                    <----- -->ANAC58 --------->At4g35610         <---------AHL20(2)  --------->ICU4<---------YAB1        ------ -->ANAC58<---------MYB46(3)     --------->AHL20(2)      --------->GLK1(1)--------->YAB1    <--------   actttccaacagtggctgaaaataaagtaagacatttttatattttttaggtaattgagaaatcatttgtattttatcatttttcatttgtattcttata  28446300                         --------->HSFB2a(2)                         <---------HSFB2a(2)                         --------------->AGL15                         <---------------AGL15                        <-----------------AGL2                        <-----------------AG                        <-----------------AGL3                        ----------------->AGL3 ---------ARR11(3)      <-----------------AGL1 -------->AHL20(1)      ----------------->AGL2 -------->ARR11(3) --------->ATHB12 ---------AHL20(1) <---------ICU4        --------->ARR11(3) --------AHL20(2) --------->ICU4         <---------ARR11(3)           <---------YAB1 ----YAB1         <---------YAB1         <---------GLK1(2)         <---------AHL20(2)               < --->AHL20(2) <---------ARR11(3) --------->At5g28300        --------->YAB1                     <----- -YAB1        --------->ARR11(3)----------->GT1   --------->ARR11(3)--------->AHL20(2)<---------TOE2(3)   aatattttttgcaatagatattgattactagaaatggtaaatagatttttaagacattgttatcagcatattatttatgtgtgtttttgtggtttatttt  28446400                           <---------ANAC58                           ----------->GT1                           <---------ANAC58                           <---------ANAC46                          <-------TEIL                         <---------ANAC46                       <---------MYB46(3)                      --------->ALFIN1                      <---------DEAR3(1)                      <---------AtMYB61                    <------MYB83                    <---------MYB46(3)                    <------MYB46(1)                   <---------MYB46(3)                   --------->MYB55(2)                   <---------DEAR3(1)                   --------->ALFIN1                   <---------AtMYB61                   --------->MYB111(1)                   --------->MYB46(2)                   --------->MYB111(2)                  <--------P                                          <------NtERF2                  <---------MYB52(1)                                 <---------MYB46(3)                  <---------MYB55(1)                                <---------ANAC46                 <-------GAMYB                                      --------->ALFIN1                 <---------MYB52(1)                          --------->AHL20(1)                <---------DEAR3(2)                           --------->ARR11(3)<---------TOE2(3)                <------MYB83                                 <---------AHL20(1)--------->DAG2 <------                --------->MYB55(2)                  <---------At4g35610<---------ANAC46     ---------                <---------MYB46(3)                  --------->At4g35610----------->GT1    <---------ANAC55(1)                <------MYB46(1)                <---------LBD16   <-----------RAV1(1)      <---------YAB1 ----------DOF2<---------DEAR3(1)       <---------ANAC46   --------->GLK1(2)   <---------TOE1(3) ------GT1   <-----------HVH21   ---------->DOF2 --------->LBD16 <---------AtMYB61        <---------ANAC46   ctctttttcaaaatgggtcggttggtggtgcgtataaaagttgtgagtatgcggagatgagaatattttggtgggggaaataaggttgtattatgtgtgg  28446500  Previous    Next  AGI:  At1g75750.1    Description:  GASA1 (GAST1 PROTEIN HOMOLOG 1). Identical to Gibberellin-regulated protein 1 precursor (GASA1) [Arabidopsis Thaliana] (GB:P46689;GB:Q8W114;GB:Q9LR14); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18420.1); similar to snakin2 [Solanum tuberosum] (GB:CAC44012.1); contains InterPro domain Gibberellin regulated protein (InterPro:IPR003854) Range:  from: 28445187    to: 28446028    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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