Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ARR14(3)                                         --------->ARR14(3)                                  <---------YAB1                                --------->YAB1                                <---------ICU4        ------>ZmHOX2a(1)                               <---------YAB1  <---------ANAC58                              <---------ARR11(3)  --------->ZAT18                              --------->ARR11(3)  <---------ZAT18                             --------->YAB1    <---------ANAC58                            <---------YAB1 ------>ZmHOX2a(2)                         <---------YAB1  --------->ARR11(3)                        --------->ARR11(3) ==================HOX2a_HOX2a         --------->TOE1(3)--------->YAB1 <---------ARR14(2)         --------->TOE2(3)<---------ICU4 --------->ARR14(2)  --------->AHL20(2)   --------->YAB1    <---------ARR11(3) -------->AHL20(2)    <---------YAB1     <---------AGP1 >GAMYB  <---------MYB59<---------ARR11(3)===================HOX2a_HOX2a    --------->YAB1 ->MYB46(3)           --------->ICU4   ----------->ARR10 <---------YAB1  --------->bZIP60(1)      --- --GT1  <---------ANAC55(2) --------->ICU4<------ZmHOX2a(2)              <---------bZIP60(1)      ---   attttaaaatacctaaacaatctcatgatcatgatcatgagaagatcttgagtgtccttatatttgttttatatgatatcatatcaaatatgtctgcatc  28393900                                        <---------ANAC58                               <---------At4g35610                                        <---------ANAC58                               --------->At4g35610                                        <---------ANAC46                             <---------ANAC46            <----------DOF2        <---------YAB1                                 --------->ALFIN1           <---------ANAC58       <---------TOE2(3)                             <---------REM1(1)           <---------ANAC58   --------->ARR11(3)                                <-----------RAV1(1)       ----------------------->TaNAC69(2)                --------->ARR11(3)     <---------bZIP60(2) - ------>ANAC58                <---------ARR11(3)         <---------ARR11(3)     ===================== ------>ANAC58              <---------TOE2(3)          ----------->ARR10     <---------YAB1        <-   acgatatatgtttgctttctctacgtttctaagatttatgtttcttgaattcttgggaagaacttgcatatgtgtttttatgatgtggctgctacaatgg  28394000                  --------->ZAT14                  <---------ZAT14    --------->ICU4  --------->HSFB2a(2)                <---------YAB1  <---------HSFB2a(2)  <---------ZAT14 ---------->RAV1(2)    --------->ZAT14  <---------YAB1                              <---------ANAC55(2) ===========RAV   --------->ZAT18  --------->YAB1                                <---------MYB52(1) ---------DOF2<-----------GT1     <---------ATHB12                      --------->AHL20(2) --------->TOE1(3)   gcttctgggcctgttttaactggactgtagagtccattcatgatcaatagaggcccgaatataagtctactcattttaaaaccattacttaaaccataag  28394100                                                           <---------ANAC55(2)                                                           <---------O2                                                           --------->O2                                                           --------->ANAC55(2)                                                           <---------TGA1a                                      <---------ICU4       --------->TGA1a                        --------->CCA1(2)                  --------->ANAC58                       <---------ARR14(2)                  --------->ANAC58                       --------->ARR14(2)                 ------>NtERF2                       <---------ARR11(3)                <---------ALFIN1         --------->AHL20(2)                       --------->ARR11(3)    ========================bZIP_DOF------>ZmHOX2a(1)                       --------->ARR11(1)    ---------->DOF2        <-----------ARR10                 --------->ANAC58     -------->HAHB4  ==============================HOX2a_HOX2a           ---------->DOF2           <---------YAB1   ------>ZmHOX2a(2)     --------->TOE1(3)        --------->TOE2(3)            --------->ICU4  ===============================HOX2a_HOX2a        --------->TOE1(3)          --------->YAB1    <------ZmHOX2a(2)      --------->TOE2(3)      -------->P --------->ANAC46 <---------ATHB51  --------->ARR14(2)    <---------YAB1    --------- --------->ZAT6  --------->ANAC58 <---------ATHB12  <---------ARR14(2)--------->TOE2(3)    ------->TEIL   aaaacactaaccttaaaacacacaagatttggaccaataataatcgaaaacgcagatcgccacgtatgctaatcttatccttaatcaaatatggaccgtc  28394200                                                                 -------->HAHB4                                                                 <--------ATHB1                                                                 <---------ICU4                                                                <---------ATHB12                                                                <---------ATHB51                                                                --------->ICU4                                                              ------>MYB83                                                              ------>MYB46(1)                                                            <---------MYB59                                                          ------>MYB83                                                          ------>MYB46(1)                                                         --------->ORA47(1)                                                        --------->DEAR3(1)                ================================================MYC_MYB            --------->AHL20(2)                --------->TGA1a                         ------->GAMYB  --------->ANAC46                <---------TGA1a                        --------->MYB46(3)         ----------->TBP      <----------DOF2   <-----------GT1              <-----------GT1 <-----------GT1    <-----------GT1      ====================bZIP_DOF                   --------->MYB52(1)<---------At4g35610         <- >DEAR3(2)     --------->SPL7        <---------MYB52(1)--------->DEAR3(2)      <---------YAB1    ----   gaaatggcctttaatcggacgtctataaactactctcccgttaatctcccaaaattaaccgacctaataattcacctcatcactataaattcactaatct  28394300                                                   <<<<<<<<<TBF1                                               --------->GLK1(2)    <----------DOF2                            --------->ARR14(2)                               <----    <---------DAG2        *TSS   ---------->DOF2   <------------------------ANAC81              ----- ---------DOF2           ----------->RAV1(1)   <---------ARR14(2)                      --------->At4g35610 ----->At4g35610--------->YAB1 --------->YAB1 <---------GLK1(2)                        <---------At4g35610   gcttcacttttctcaaaatcaaaacaacaacattcaaaagctattagcgattcttcttctctctgattcaatcttcttcatagtttctaagctctcaagt  28394400                                                                                             <-------                                                                                             --------                                                                                       <---------MYB52(1)                                                                                     <---------MYB46(3)                                                                                     --------->MYB52(2)                                                                                     <---------ANAC58                                                                        --------->ANAC58    <--------                                                                        --------->ANAC58   <---------MYB52(1)                           --------->MYB52(1)               --------->HSFB2a(2)  --------->HSFB2a(1)                   <---------TOE1(2)                        <---------HSFB2a(2)  --------->HSFC1(2)                   --------->SPL7                           --------->LBD16      <---------HSFB2a(1)                 <---------SPL7                      --------->DAG2     --------->ANAC46 <---------MYB46(3)                 --------->TOE1(2)           --------->ANAC58        <---------At4g35610 --------->MYB52(2)              <---------ANAC58               --------->ANAC58        --------->At4g35610<---------TOE1(2)      --------->ANAC58 --------->ANAC58      --------->ANAC46  <------ZmHOX2a(1) <---------HSFC1(2)      --------->ANAC58 --------->ANAC58     <---------LBD16<---------TOE1(1)    <---------TOE2(3) -----ARR11(3)<---------ANAC46    --------->ANAC58  ---------->DOF2  <---------ZAT2  <---------ANAC58 ---->ARR11(3)<---------ANAC58    --------->ANAC58<------ZmHOX2a(1)  --------->ZAT2 <-------TEIL   tcttgacgaagcaatggctcgtacgaagcaaactgcaagaaaatcacacggaggaaaagctccgaggactctgctcgctaccaaggttcgttcgttcgtt  28394500                                                                                           --------->RAP2.3(2)                                                                                           --------->DREB2C(2)                                                                                           --------->DEAR3(1)                                                                                          --------->ORA47(2)                                                                                          --------->DEAR3(2)                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                   <-----------ARR10                                                                                   --------->GLK1(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                                  --------->GLK1(1)                                                                                  <---------GLK1(1)                                                                                 ----------->ARR10                                                                            <---------ANAC46                                                                           --------->ATERF1(1)                                                                           <------NtERF2 <---------ATERF1(1)                                                                          <---------DEAR4(2)                                                                          <---------ATERF1(1)                                                                          <---------RAP2.3(1)                                                                          <---------ORA47(2)                                                              ----------->GT1   <------ZmHOX2a(1)                                                              --------->YAB1--------->DEAR3(1)                                                    <---------ANAC58      <---------ERF1 <---------RAP2.3(1)                                                    <---------ANAC58      ------>NtERF2  ------>NtERF2                                                   --------->ATHB12      <---------DEAR3(1)--------->RAP2.3(3) --MYB46(3)                  --------->GLK1(1)   <---------WOX13(1)      <---------RAP2.3(3) ->MYB52(2)     --------->ANAC55(2)            --------->ATHB12          <---------RAP2.6(2)------>NtERF2 -TOE1(2)       <---------ANAC46             <---------WOX13(1)          <---------RAP2.3(2)<--------   cttagttttgaatttgtaacgtagttttgagaaatctagggtttcagattgattgattgtgtaatcgtaacataggcggcgaggaaatctgcgccgacta  28394600                                      <-----------HVH21                                     --------->DEAR3(1)                                    --------->MYB46(3)                                    --------->HSFC1(2)                                    <------------AtMYB77                                    <---------HSFC1(2)                                    <---------HSFB2a(1)                                    --------->HSFB2a(1)                                    --------->DEAR3(2)                                  <---------ARR14(2)                                  --------->ARR14(2)                               --------->HSFB2a(2)                               --------->ANAC55(2)                               --------->LBD16                               --------->ANAC58                               <---------ANAC55(2)                               --------->ANAC58                               --------->ANAC46                               <---------HSFB2a(2)                              <---------LBD16                        <---------DOF5.7(2)              <-----------GT1                        <---------At5g28300       <---------MYB52(1)                      --------->DOF5.7(2)         <--------P                    <-----------GT1         --------->ANAC58  <---------SPL7        <---------MYB52(1)       --------->YAB1         --------->ANAC58  <-----------HVH21    <---------HSFB2a(2)    <----------DOF2   <------ZmHOX2a(1)  <---------MYB52(1)   <----------DOF2       <-----------GT1--------->YAB1      - -ATERF1(1)    --------->AtMYB61--------->LBD16 --------->HSFB2a(2)  ------>ZmHOX2a(1)              <   ctggaggagtcaagaaacctcaccgttaccgtcccggaaccgtcgctcttcggtaagtttcacgatttctcctctttcaaaatcacaatctctgtttctg  28394700                                                                     --------->HSFB2a(2)                                                                     <---------HSFB2a(2)       <-----      <---------ANAC46                ------>ZmHOX2a(1)            --------->MYB52(1)<---------MYB46(3)      <---------ANAC58          <------MYB83               <-------TEIL       <---------ZAT14 -------      <---------ANAC58          <------MYB46(1)           --------->GLK1(2) --------->ZAT14  -------- <---------ICU4   --------->ICU4<---------DEAR3(2)       <---------GLK1(2)  <---------ZAT14  <------- -------->ICU4    <---------YAB1<---------MYB46(3)     ----------->ARR10 ---------->DOF2     <------- ---------ATHB12--------->YAB1<---------MYB52(1)------->TEIL----------->GT1 --------->ZAT18 ------>ZmHOX2a(2)   aaatcattccgtcttcgatgatgatgaaatcagttggttcctgtttgatgaatcagtgagattcgtaaataccagaagagcacagagttgttgatccgta  28394800  Previous    Next  AGI:  At1g75600.1    Description:  histone H3.2, putative. Identical to Histone H3-like 3 [Arabidopsis Thaliana] (GB:Q9LR02); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10980.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN70652.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 28394326    to: 28395154    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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