Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              >>>>>>>                                                                                              >>>>>>>                                                                                              >>>>>>>                         <---------At4g35610                                                 --------                         --------->At4g35610                                                 --------                       <--------P                                                            --------                     <------MYB83                                                          <---------At4g35610                     <------MYB46(1)                                                       --------->At4g35610                    <---------MYB46(3)                                             --------->ARR11(3)           --------->AHL20(2)                                                      --------->AHL20(1)           <---------AHL20(2)                                                      <---------ARR11(3)          <---------AHL20(2)                                                    --------->AHL20(2)       --------->YAB1<---------ANAC46                <---------MYB52(1)       --------->ANAC58>>>>>>> --------->YAB1     --------->MYB59              <---------PCF2   <---------CCA1(2)<---------AHL20(1) -----DAG2--------->AHL20(2)              <----------DOF2        ------->TEIL --------->ANAC58>>>>>>>   ttatcacaagaataaaattagttgggtagatgagttggactcttctttatgggcccttattctactgcatctcttaaaccaagaaaatatttgagttgac  28331100  <---------AHL20(2)  --------->AHL20(2)                                                            <---------YAB1  --------->AHL20(1)                                                            --------->ICU4      < --------->AHL20(2)                                                           <---------ICU4        - ---WRKY18(1)                                                                 -------->HAHB4      <-- >>>WRKY26                                                                    --------->YAB1    ----- >>>WRKY11                                                                   --------->ICU4     ----- >>>WRKY38                                                                  <---------TOE2(3)  <----- ->WRKY12                                                               <----------DOF2      -------- ->WRKY38(1)             --------->ANAC46             ---------->DOF2 ----------->GT1       <-------TEIL ->WRKY45              --------->ANAC46          --------->ANAC58  --------->MYB52(1)   <------------ >>>WRKY43        <---------ICU4          <-----------GT1          -------->P<---------ATHB12<------- >>>WRKY6    <---------ATHB12  --------->LBD16   --------->ANAC58 --------->MYB52(1)    -------------   caaaaaaattgacaaatcaacaattacacaaccctgaaatgaagttaccacaagcacaaagcttatactaaccggtttaatgatgattttttggtacata  28331200    <------MYB46(1)    <------MYB83  <--------P <---------ANAC46 ---------MYB46(3)                                                                              <---- -------->ATHB12                                                                         <---------ALFIN1 -------WOX13(1)                                                                        <---------REM1(2) ---->ATHB51                                             --------->YAB1         ------->GAMYB  ------ ---->ATHB12                                           ------>MYB46(1)         --------->MYB46(3) ----YAB1                                         <---------ALFIN1             <------------MYB.PH3(2) ->ANAC55(2)                                    <---------ALFIN1               <---------MYB111(1) ---AtSPL8                                     ------->GAMYB  --------->AtLEC2 <---------MYB111(2) --ANAC55(2)          <<<<<<<<<MYB98         -------->P------>MYB83            <---------MYB46(2) -->AtSPL8 ----------->GT1              --------->WOX13(1) <---------YAB1      <---------MYB52(2)   attggttggagattggagaaataagttaggggaaaatgtcataaatcaacccacacctatcaccattcaaatgctcttccaactaacttctacacatttt  28331300                                                                          ------->MYC2                                                                          ------->PIF4                                                                          <-------MYC4                                                                          ------->MYC3                                                                          ------->MYC4                                                                          ------->PIF5                                                                          <-------MYC3                                                                          <-------PIF4                                                                          <-------MYC2                                                                         ============================                                                                         --------->TGA1a                                   <---------ICU4                        --------->O2                             <-----------HVH21                           <---------O2                             <-----------TGA1                            <---------bZIP60(2)                            <---------ANAC55(2)                          <---------ANAC55(2)                   --------->HSFB2a(2)                                   <---------TGA1a                   <---------HSFB2a(2)                                   --------->ANAC55(2)      <---------HSFB2a(2)   --------->ANAC46                            ------------>OsbHLH66      --------->HSFB2a(2)   <---------ANAC58                     ---------->DOF2 -----YAB1<---------GLK1(1) <---------ANAC58                     ==================bZIP_DOF --->AHL20(2)      --------->HSFC1(1)                    --------->TOE2(3)<-------PIF5             --   tattctctctagaattctcatctagaaaatgcgtcactaattccttcttagtcagtaatccctaatctaaagagcacgtggcattacaagaattttgtag  28331400                                --------->YAB1                            <----------TaMYB80                            --------->GLK1(1)                            --------->KAN4(1)                           <---------ARR14(2)                           --------->ARR14(2)                           <---------KAN4(2)                           --------->ARR11(3)                     <---------TGA1a                     <---------O2                                             --------->ANAC58                     --------->TGA1a                                          --------->ANAC58        =======================bZIP_DOF                                  <-----------GT1         ----        ---------->DOF2 <---------TOE1(2)                ------>ZmHOX2a(1)    --------->ANAC46 <----- ==================bZIP_DOF<---------ARR11(3)      <<<<<<<<<TBF1       <---------YAB1        -------- --------->GT1       --------->O2           <---------ALFIN1  ------>ZmHOX2a(1)  ----------->RAV1(1)   atggataatataaagtctctcactcgtgggatattcagaatcacatccacttcttcttcctctcctctcgtttattatccacacaacaaaaatacaaatc  28331500                                     --------->TOE2(3)                                     --------->TOE1(3)                                  <---------ARR14(2)                                  --------->ARR14(2)                                 <---------CCA1(2)              <---------ICU4   --------->YAB1                     ---------->DOF2              --------->YAB1  <---------YAB1                     ---------->DOF2             <---------YAB1 --------->YAB1                  --------->ANAC46     --------->ARR11(3)     <---------ICU4                 --------->MYB46(3)     <---------ARR11(3)    <---------ATHB12    *TSS <----------DOF2--------->DAG2    --------->CCA1(1)  ------------>CBF     <---------AHL20(2) --------->AtMYB61    --------->RVE1(1) <-----------HVH21    <---------AHL20(2)------>MYB83 ----->WOX13(1)    <---------bZIP60(2)------>ZmHOX2a(1) <-----------GT1 ---------->DOF2          <--- ----ATHB12  --------->ICU4--------->ICU4  <---------AHL20(1)------>MYB46(1)              ----------- ->ANAC46  --------->YAB1--------->WOX13(1)--------->AHL20(2)----------->RAV1(1)         <---------TOE2(3)   actcaaatatctgttataatgacatgtcaattatcatatccttaatttttttttctttaaacccaccaaaaggcaaaagaaatattcaaataatgtaata  28331600                                                                    <-----------GT1                                                         --------->ANAC55(2)                                                         --------->ANAC58                                                         --------->ANAC58                    ------>ZmHOX2a(1)    <----------DOF2           <-----------ARR10        <---------ALFIN1                  <-----------GT1 --------GT1                 <---------CCA1(2)       <---------ALFIN1                  <---------ARR11(3) >GT1             <---------YAB1     ----------->RAV1(2) --------->ANAC46             <---------ICU4   aaccctcttttttgtattctctgattacttcgtctcttcccctgtaatggcgcttccacacgtagtctcttcaccttcttcaacttcattatctccttcc  28331700                                                          --------->LBD16                                         ------------>AtMYB77                                         --------->MYB52(1) <---------ANAC46                                        --------->DEAR3(1)------>NtERF2                                        ----------->HVH21<---------ATERF1(2)                                <----------DOF2          --------->DEAR3(1)                               ------>ZmHOX2a(2)         <---------DEAR3(1)                              <------ZmHOX2a(2)         --------->ATERF1(1)                             <---------AGP1             <---------LBD16                             --------->ARR11(3)    <---------ICU4                             --------->AGP1 <---------DEAR3(2)                  <-----------GT1       --------->At1g77200<------NtERF2                <-----------HVH21      --------->DEAR3(2)--------->ATERF1(2)          --------->AtMYB61  <---------ARR11(3)<---------MYB46(3)         <---------MYB55(2) <---------CCA1(2)<-------GAMYB<---------ATERF1(1)   <---------ANAC58         --------->MYB46(3)----------->ARR10<---------MYB46(3)       --------->ANAC46     <-------TEIL       --------->ANAC46  <---------MYB52(1)<---------DEAR3(1)<-------GAMYB      <---------ANAC58   ttcaaatccaaaccaccgtttcactcccttagatctttatcaccgacggttgataatcgccggcgttgtaaactcaacagttccttccgatgttcatctt  28331800              --------->YAB1                 --------->ARR11(3)            --------->ANAC58         --------->ARR14(2)                                     ---------            --------->ANAC58         <---------ARR14(2)                                    --------->ANAC46        --------->LBD16 --------->ANAC46    --------->YAB1   ------>ZmHOX2a(1)            --------->LBD16        <---------HSFB2a(2)          --------->GLK1(2) --------->ZAT2<---------ALFIN1     <---------LBD16        --------->HSFB2a(2) <---------ARR11(3)         <---------At4g35610 <---------ALFIN1--------->LBD16   cttcattctccgagaagcatcacaacgcgaaatctccaaaatccgatgatatcgtcgagcttcctctgtttccactcccactcgttctcttccccggagc  28331900                             <---------DOF5.7(2)                           <---------MYB52(1)                          <-------GAMYB                         --------->ANAC55(2)                         <---------ANAC55(2)                         <---------ANAC58               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             --------->ARR11(3)             --------->AGP1--------->DOF5.7(2)             <---------GLK1(2)             <---------ARR14(2)             --------->ARR14(2)             <---------ARR14(3)                --------->ANAC46             --------->ARR14(3)                --------->ANAC58             <---------ARR11(3)                --------->ANAC58                              <-------             <-----------ARR10        <---------YAB1                                         <-------      ===============HOX2a_HOX2a    --------->YAB1                               <---------ZAT18      ------>ZmHOX2a(1)  <---------ANAC58    <---------ALFIN1              <---------ANAC46  --------      ================HOX2a_HOX2a <---------ARR11(1)                 <---------ARR14(2)      <-------  ===================HOX2a_HOX2a <---------ARR14(1)             ------>ZmHOX2a(2)--------->ZAT14  ====================HOX2a_HOX2a<---------CCA1(2)            --------->AGP1 <------NtERF2--------->ARR14(2)  ------>ZmHOX2a(1)  <---------GLK1(1)--------->ICU4 ------>ZmHOX2a(1)  <---------DEAR3(1)<---------ARR14(2) >LBD16     <---------CCA1(2)<---------At5g28300     ==================HOX2a_HOX2a        --------->GLK1(2)   aatccttcctcttcagatcttcgaattccgttaccgtatcatgatgcacacgctcctccaatctgatctacgattcggcgtagtttactccgattccgtc  28332000  Previous    Next  AGI:  At1g75460.1    Description:  ATP-dependent protease La (LON) domain-containing protein. similar to ATP-dependent protease La (LON) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G19740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61078.1); contains InterPro domain Peptidase S16, lon N-terminal; (InterPro:IPR003111) Range:  from: 28331547    to: 28333425    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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