Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                          --------->ZAT14                                             --------->MYB52(1)                           <---------ZAT14                                         <---------At4g35610                            --------->At5g28300              --------->ANAC58      --------->bZIP60(1)                                ----------->GT1              --------->ANAC58      <---------bZIP60(1)                               <---------DEAR3(1)   <---------WOX13(1)          --------->At4g35610         <---------ARR14(2)        <---------ORA47(1) ---------ATHB12             <-----------RAV1(2)           ----------->HVH21       <---------SPL7---- -------At4g35610    <---------ATHB12    --------->At4g35610                       ----------->HVH21< >NtERF2 <---------------AtSPL3<---------At4g35610        <------ZmHOX2a(1)       --------->ALFIN1 <-   cgatgatggatgaagcacggccaatggctcttcaggtgacttcagcataccgaagtctgaggagacggaggctaagtcggaagggtggacggtgaagtgg  28321600                                            ------->MYC3                                       --------->TCP23                                       --------->TCP15(2)                                       --------->ATERF1(1)                                      <---------PCF5                                      --------->PCF2                                      <---------TCP15(1)                                      <---------TCP20                                      <---------TCP16(1)                                      ------>NtERF2                                  <-----------RAV1(1)  --------->ANAC58                  <------ZmHOX2a(1)  <---------DDF1              --------->ZAT18          --------->ANAC46                 --------->At4g35610 <---------ETT(2)             <---------ZAT14          --------->ANAC58               <-----------RAV1(2) --------->ETT(2)           --------->ZAT2<---------TOE1(2)                         <-----------HVH21 -->ALFIN1                  <---------At4g35610       <---------LBD16              --------->ANAC58 -TGA1a                   <------ZmHOX2a(1) <-------MYC3                           --------->ANAC58 -O2                    --------->ALFIN1 <---------ALFIN1                         ------->TEIL -bZIP60(2)           --------->LBD16 <---------TCP11(2)      --------->YAB1      --------->SPL7 ----->ATERF1(1)     <---------ANAC46<-----------TCP11(1)    <---------YAB1     <---------SPL7 ------NtERF2  <------NtERF2--------->At4g35610      <---------ALFIN1          <---------ANAC58 --------ATERF1(1)  <---------LBD16  <---------PCF2  --------->MYB52(1)        <---------ANAC58------   ccgtcgacatctatggctccgatgcggaggagctcactggggcccacgtttagacccacggctatgatcagtttacatatggcgaacgtcaggagaagaa  28321700      --------->TGA2(2)                                                                         <----     <-----------TGA1                                                                        --------    --------->ANAC46                                                                         --------    --------->O2                                                                    --------->CCA1(2)    <---------bZIP60(1)                                                             --------->ARR14(1)    --------->bZIP60(1)                          <---------YAB1                    <---------ARR14(2)    <---------O2  <-------TEIL     --------->ANAC58         <------ZmHOX2a(1)      --------->ARR11(1)    --------->TGA2(1)              --------->ANAC46      <------ZmHOX2a(1)         --------->ARR14(2)    <---------TGA2(1)              --------->ANAC58    <---------TOE2(3)       ---------->DOF2  -----   <-----------STF1    ---------->DOF2       --------->GLK1(2)     --------->AHL20(1)     --------->YAB1 ---->DOF2  <-----------GT1 --------->ARR14(2) --------->YAB1      --------->ARR11(3)<-------TEIL  <-   agcttgacgtcatttcacgattcatcaaagaatactcaagaaacaagaatcaagattgaggaggaagaatatatagaagaaaaaagatacgataataata  28321800                                                              <---------ANAC46                                                              --------->MYB52(2)                                                              <---------ANAC58                                                              <---------ANAC58                                                             <-------TEIL     --------->ANAC58                                                          <---------MYB46(3)  --------->ANAC58                                                        <---------ANAC46     --------->SPL7                                                   ------>ZmHOX2a(2)      --------->ANAC55(2)      <-                                                  <------ZmHOX2a(2)       <---------ANAC55(2)      --                                                 <---------ARR14(3)      <---------TOE1(3)         -- -----AHL20(1)        <---------LBD16            <---------ARR11(3)      <---------TOE2(3)         <- ->AHL20(2)    <---------ARR11(3)                <---------ARR14(2)     --------->MYB52(1)         <- ->YAB1  <---------YAB1      ----------->GT1     --------->ARR11(3)     <---------DOF5.7(2)        -- ---->AHL20(1) --------->ARR11(3)                --------->ARR14(2)  --------->At4g35610           <- --------AHL20(2) <---------AHL20(2)             --------->ARR14(3)  <---------At4g35610    <--------   ttttttagataatgaaagattttatggggaaatgaaaaaacatatatagaagatccttgggggttcgtgagagctaacgtaagcccagattacgctttga  28321900                                                                                         ------------                                                             <---------AHL20(2)          <-----------                                                        --------->ARR11(3)               ------------              --------->AtLEC2                          <---------ARR11(3)           <---------AHL20(2)          ----------->RAV1(1)                           <---------AHL20(1)           --------->AHL20(1) --------ARR14(2)                                       --------->AHL20(2)           <---------AHL20(1) ------->ARR14(2)                <-----------GT1        --------->AHL20(1)          --------->YAB1 ------->ARR11(3)     --------->GLK1(2)           --------->TOE2(3)                 <---------AHL20(2) --------ARR11(3)    <---------GLK1(2)    <---------ANAC58  --------->YAB1          --------->AHL20(2) --------GLK1(2)     <---------ARR14(2)   <---------ANAC58 <---------AHL20(2)   --------->AHL20(2) ------->ARR14(3)    --------->ARR14(2)   <---------ANAC46 <---------YAB1       <---------AHL20(2) --------ARR14(3)  ----------->ARR10  <---------MYB52(1)<---------AHL20(2)      --------->AHL20(1) --DOF2--------->ANAC46      <----------DOF2      <----------DOF2              --------->AHL20(2)   agattttctgagcaacatgcacagattctctcttttttcggtttgggtgaaactttaatatattataacgagtgttttaaaaaaaattatattcgtacaa  28322000                                                                                            <--------                                                                                           <---------bZIP60(1)                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)                                                                                           ==========                                                                                           ==========                                                                                           <---------TGA1a                                                                                           --------->bZIP60(1)                                                                                           --------->ANAC58                                                                                           --------->bZIP60(2)                                                                                           --------->ANAC58                                                                                           --------->TGA1a                                                                                           <---------O2                                                                                           --------->ANAC46                                                                   ==================================bZIP_DOF                                                                   ---------->DOF2         --------->ANAC55(1)                                                                <------ZmHOX2a(1)         <----------                                                                ===============================HOX2a_HOX2a                                         <----------ID1        <----------ID1           <------ZmHOX2a(2)                                   <---------ARR14(2)      <---------AHL20(2)          --------->ARR11(3)                                   --------->GLK1(2)     <-----------TBP  <---------REM1(1)--------->O2 <-----------GT1                   --------->ARR14(2)  <---------------AGL15           <---------ARR11(3) --->AtSPL3            *TSS --------->REM1(2)          --------------->AGL15    --------->LBD16 ----AtSPL8  <---------ANAC58  --------->HSFB2a(2)    ----------------->AGL3   <---------ANAC46 --->AtSPL8  <---------ANAC58 <---------ANAC46        <-----------------AGL3  <---------LBD16    <---   atttaacgagtttgtgcgtttatatgtgtgtgtcgagaatatgaagacaagagttctctatttataggacaaagagttgtaccggagaagatcacgtcat  28322100                                                       <---------ANAC58                           ---                                                       <---------ANAC58                          <---                                                       --------->ANAC55(2)                     ------                                                       --------->O2                           ------- <----------DOF2   --------->TOE2(3)              <---------ARR11(3)                ------>ZmHOX2a(1) ---TGA1           <----------DOF2               --------->GLK1(1)                 --------->TOE2(3)< ===========bZIP_DOF                      <---------ANAC46                      <-----------GT1<----- ===========bZIP_DOF                      <---------ANAC58                  <----------DOF2   <------ -STF1 <-----------GT1                    <---------ANAC58<-----------HVH21 <---------DAG2    <------ ------GLK1(2)<-------TEIL         ---------->DOF2--------->ARR11(3)  --------->TOE2(3)     ---------   attctttattaacaagttcatctttaacaaaaaccaaaaaagaaccgtgtgatatctacgtgtcactgtttacattaacttttttccttagggtcaatta  28322200                                      ------->TEIL    <-----------GT1                --------->TGA1a                              --------->ATHB12 ------>YAB1                       <---------TGA1a                           --------->MYB52(1) ------YAB1                        <---------ANAC55(2)                    --------->ANAC58 --->YAB1                          --------->ANAC55(1)                    <---------ANAC55(2) -->ICU4--------->ZAT14            --------->ANAC55(2)                    --------->ANAC46 ---------YAB1                     --------->ANAC58                       --------->ANAC55(2) ----ICU4                          --------->ANAC46                       --------->ANAC55(1) ---ATHB51                         --------->ANAC58                       --------->ANAC58 ---ATHB12             <---------ANAC46   ------->TEIL                ------>MYB83 >WOX13(1)             ----------->GT1<---------TOE2(2)               ------>MYB46(1)            <---   tgatgttaactatactacttgcatagtgtatatacacacgtatgtatttgtttcagcgagacatcgtagaccaactacgtaacgatttgactaattcaaa  28322300            <-----------HVH21           --------->ANAC46                                                                    ------           --------->ANAC58                                                 <---------ZAT6     ------        --------->ARR14(2)                  <---------YAB1        <-------MYC3              <--------        <---------ARR14(2)           -------->P                   ------->MYC3 <---------REM1(1) ------ICU4--------->ANAC58        --------->MYB46(3)  ----------->GT1  <---------YAB1<-------TEIL---   aatggcagtgtatacgtcaagactgaaaatgcaaaaaacaaccattttgatatggttttgttaataaacgtgttatcagtgttgaagctacatataacct  28322400                                                                       <------MYB46(1)                                                                       <------MYB83   >>>>>>>>>>WRKY63                                                  <---------WOX13(1) --->TOE2(3)                                              <-----------GT1--------->PCF5      -------- --->TOE1(3) <----------DOF2                --------->ANAC58       --------->ATHB12         <-------- ---GT1    ------->TEIL                     --------->ANAC58      <---------YAB1    ----------->GT1 ------>ATHB12                    --------->GLK1(2)     <---------MYB52(2)         ----------->GT1   tgatttgactatggacttttgcaaccatgtctgaagaatcaagaacaggcactagacaattaaccattttgattggtccccaagaacgtttaaaatgata  28322500  Previous    Next  AGI:  At1g75450.1    Description:  CKX5 (CYTOKININ OXIDASE 5); cytokinin dehydrogenase. Identical to Cytokinin dehydrogenase 5 precursor (CKX5) [Arabidopsis Thaliana] (GB:Q67YU0;GB:Q9FUJ0;GB:Q9FWT3); similar to ATCKX1/CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G41510.1); similar to Os01g0775400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044409.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61088.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:I Range:  from: 28318119    to: 28322023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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