Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ------>ZmHOX2a(1) --------->ARR11(3)            --------->At4g35610 <---------ARR14(2)            <---------At4g35610 <---------ARR11(3)   <---------ARR11(3) <---------GLK1(2)    --------->ARR11(3)                                  ---------->DOF2 --------->ARR14(2)   <-----------ARR10                               --------->At4g35610           - --------->ARR10   --------->AHL20(2) --------->ANAC58            --------->ANAC58          --------- -------HVH21      <---------AHL20(2) --------->ANAC58          ---------->DOF2          <---------ANAC58 ----At4g35610--------->AHL20(2)      --------->ANAC46    <---------HSFB2a(2)            <---------ANAC58 --HVH21--------->AtLEC2     --------->YAB1          ------->TEIL --------->ANAC58       <---------ANAC46   tcagattttcctgcaaaaaaataaaatcttatcatctcacaatccactggaaatgaatctctagatgaaagcatctaaaagtatcaaacttgcgtagttt  28271700                                                                                                  <--                                                                                                  ---                                                                                            <--------                                                                                         <----------DOF2                --------->YAB1                                                          ------>ZmHOX2a(2)                <---------ICU4                             ------>MYB83               <---------ARR11(3)               <---------ATHB12                   XXXXXXXXXXXXXXXXXXXXX>MIR833-3P     --------->ARR11(3)               <---------ATHB51                 <---------ARR14(2)               <---------ARR11(3)   --------->YAB1                               --------->ARR14(2)               --------->GLK1(2)---  <---------ATHB12                              --------->GLK1(2)                --------->ARR14(2) -------->WOX13(1)                          --------->YAB1 ------>MYB46(1)       <-----------ARR10<-- -->ARR10      --------->ICU4       ----------->GT1       ----------->RAV1(1)<XXXXXXXXXXXXXXXXXXXXMIR866-5P   ctcaatcaatagaggcaataatgagtcacattttcgaatgctaaaatcaaaatccgataccaacatacaaatttcataaacaaaatctgatctttgggga  28271800               --------->ICU4             --------->YAB1                                                        ----------->HVH21     ---------->DOF2                                                         --------->ATERF1(1)    --------->LBD16                                                          <------ZmHOX2a(1)   <---------HSFB2a(2)                                                --------->MYB52(1)   --------->HSFB2a(2)                                               ----------->HVH21 -------HSFB2a(1)                                                    ----------->TGA1          ------ ------>HSFB2a(1)                         ----------->HVH21        <---------O2  <---------ANAC58 -LBD16     --------->ICU4   ---------->DOF2                       --------->O2  <---------ANAC58 ------>HSFC1(2)         ----------------->AGL1       <------ZmHOX2a(1) <---------ANAC46       ------ -------HSFC1(2)<---------ICU4         --------->TOE2(3)       <---------------------WRI1      ------   agtttccgaaagaaatgataatgaaatgcctaaaaggctaacctttgacatcggaaggagaagaaggcgaagtgacggaggaggcttgacatgaaacacg  28271900                                       <---------GLK1(1)                                       <---------HSFB2a(1)                                      <-----------ARR10                                      --------->ARR14(2)                                      --------->GLK1(2)                                      <---------ARR14(2)                                   ----------->ARR10                                               --                                  <------NtERF2          --------->LBD16                          <--                                 --------->LBD16         <---------LBD16                         ----                                <---------ANAC46        <---------LBD16                         <----                        ----------->HVH21   --------->LBD16        <------ZmHOX2a(1)       ---------- --->ANAC58           ----------->GT1<---------GLK1(2)  <---------ANAC46  ------------------------>ANAC81 --->ANAC58   <------ZmHOX2a(1) <---------DEAR3(1)     <---------LBD16<------ZmHOX2a(1)  ---------->DOF2 --->ANAC46<-----------RAV1(2) <---------LBD16        --------->MYB52(1)  <---------------------WRI1   aaggcgagggagagcaggagaagggagtgaaacggcggagaatctccgaagagtagtaccggggaagaaggaggaagacgaagaagagaaggaaagagcc  28272000                                      --------->DEAR3(1)                                     <------NtERF2                                    ------>NtERF2                                    <---------RAP2.6(3)                                   --------->ANAC58                                   --------->RRTF1(3)                                   --------->RAP2.6(2)                                   --------->ANAC58                                   --------->RAP2.3(3)                                   --------->DREB2C(2)                                   --------->ANAC46                                   --------->DEAR3(1)                                   --------->RRTF1(2)                                   ------->GAMYB                                   --------->RAP2.3(2)                                   --------->ATERF1(2)                                   <---------ATERF1(2)                                  --------->ATERF1(1)                                  --------->RRTF1(1)                                  --------->MYB46(3)                                  --------->RAP2.3(1)                                       ---------          <------NtERF2          <---------At4g35610                                        ---------        --------->DEAR3(1)       --------->At4g35610                                        <--------       --------->DEAR3(2)        <---------ATERF1(1)                                       ----------   ------>ZmHOX2a(2)             ------>NtERF2                                         <----------DOF2 --------->HVH21                 <---------ZAT2                                        <---------DAG2 -------MYB52(1)       --------->ANAC58                                     ----------->HVH21<------- ----->LBD16           --------->ANAC58                                  *TSS      <---------ZAT14 -----DEAR3(1)   --------->TOE1(2)--------->ERF1                --------->WRKY38(1)--------->ZAT14 ->ARR10--------->RAP2.3(2)      --------->ZAT2              <---------MYB46(3)    <---------ZAT18   ggtgatcgagccgtcgaaacatgagaagccattgcagccgccatcgtcttaattcagagagagttgttgactctgtgagtgacactgcgctttaccttta  28272100                                                                                --------->AHL20(2)                                                                                <---------AHL20(2) >TOE2(3)                        <---------DAG2                                <---------AHL20(2) ------>AGL15             <------------CBF                              ----------->GT1 -------AGL15           <---------YAB1                                 <---------TOE2(3) ------->AGL1        <-----------GT1   --------->ZAT6             ----------->TBP              <----- ---DOF2    ----------->HVH21    <----------DOF2     ------------>CBF---------->DOF2 <-----------GT1   taagagagacaccgatgacattttttcttattgggctttttccactaggcccattttcaattctatgtataaaaaggtttatttatttttcaacttgccc  28272200                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                          <---------At4g35610                                                         --------->MYB52(1)               <------NtERF2                                                --------->LBD16                           --------->ATERF1(1)                                              --------->At4g35610                        <---------RAP2.3(1)                                              <---------LBD16      --------->ANAC58      ------>NtERF2                                             --------->MYB52(1)  ---------->DOF2         <---------ATERF1(1)                                            <---------WRKY12   <---------ZAT14          <---------RAP2.3(2)               <---------ANAC58             <---------WRKY38(1)--------->ZAT14          <---------RAP2.6(2)     <-----------GT1                      <-----------HVH21--------->ZAT6               <---------DEAR3(1)  *TSS         <---------ANAC58 <---------At4g35610  <---------ZAT6--------->ANAC58    --------->RAP2.6(3) ----------AGL15                --------->At4g35610  ----------->GT1               ---------->DOF2   taatttgtgaccatcttccttgagcttgttgttccgatgaagacggtcaccggaagagttaacagtgcaaagccaatctctctatcaaaggcggctactc  28272300                                                     --------->TOE1(2)                                                    --------->HSFC1(2)                                                    --------->HSFB2a(1)                                                    <---------HSFC1(2)                                                    <---------HSFB2a(1)         <---------AHL20(2)                                                   --------->ARR14(2)     <----------DOF2                                                   ------->TEIL        --------->ABI4(2)                 <---------At4g35610               --------->SPL7      ------>NtERF2            <---------MYB52(1)                     <---------ARR14(2)<---------MYB52(1)         <-------TEIL                             <---------CCA1(2) --------->LBD16       <---------ARR14(2)                       <---------ANAC58    <---------At4g35610       --------->ARR14(2)                       <---------ANAC58  <---------LBD16       <---------GLK1(2)                      <---------ANAC46   --------->MYB52(1)     --------->LBD16                   <---------ARR11(3)     --------->ZAT2--------->ATHB12   <---------LBD16                     --------->ARR11(3)     --------->At4g35610   ttctctccggattcgtttcttctgagaatggagcctctcaagatgttagcgcgtaccttcgacgagcttccggtgcctttattgaattgaagagcatcca  28272400                       ------->TEIL                 <----------ID1            ---------->DOF2       <---------AHL20(2)                                                                    --------      --------->AHL20(2)                                                    ------------------------>ANAC81   ----------->GT1    <---------------------WRI1            --------->CCA1(2) <------ZmHOX2a(1)  ---- <---------------------WRI1                  <------ZmHOX2a(1)     <-------TEIL      ----------->GT1   tagggagattaaatcaaaggagacgaagctaagctctaagaagaagaggaagagtcatcgagagatgggttcggaagagaggaagaagagtaagaaaaag  28272500                <---------MYB52(1)               <-------GAMYB              ------>ZmHOX2a(2)             <------ZmHOX2a(2)     --------->TOE1(2)  --------->GLK1(2)<---------ANAC46  <---------ARR14(2)  --------->ARR14(2)        >>>>>>>>>>WRKY26        <---------TOE2(3)                           <---- -->DOF2    <---------ARR11(3)     <---------AHL20(2)       <----------DOF2         <---------REM1(1) ------->GT1--------->ARR11(3)     --------->AHL20(2)  ---------->DOF2<---------ANAC46          -----   agaaaatccagcgagatcgttgtttgaagttgatcaaaaaattgtagtggaattaagaaaagctttcaaattttgtgggaatgttgttgtagttgaaaga  28272600  Previous    Next  AGI:  At1g75330.1    Description:  OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase. Identical to Ornithine carbamoyltransferase, chloroplast precursor (OTC) [Arabidopsis Thaliana] (GB:O50039;GB:Q9FWS2); similar to aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) [Arabidopsis thaliana] (TAIR:AT3G20330.1); similar to unknown [Populus trichocarpa] (GB:ABK93198.1); contains InterPro domain Aspartate/ornithine carbamoyltransferase; (InterPro:IPR006130); contains InterPro domain Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; (InterPro:IPR006132); contains InterPro domain Ornithine c Range:  from: 28269920    to: 28272073    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g75335.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60030.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66187.1) Range:  from: 28272202    to: 28272663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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