Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ======================================bZIP_DOF                                              --------->ANAC55(2)                                              <---------ANAC46                                              <---------ANAC55(1)                                              <---------bZIP60(2)                                              <---------ANAC58                                              --------->TGA1a                                              <---------O2                                              --------->O2                                              <---------TGA1a             <---------TOE2(3)                                              <---------ANAC58           ---------->DOF2                       ----------->RAV1(2)    <---------ANAC55(2)    --------->ATHB12              <---------ARR11(3)         <---------MYB46(3)          <---------ICU4 -------GAMYB--------->GLK1(1)          <---------MYB52(1)          <---------YAB1 --------->GT1--------->ARR11(3)       <-------GAMYB --------->YAB1 --------->ICU4 --------MYB46(3)      --------->At4g35610  <-----------GT1  <---------ATERF1(1) -------YAB1 <---------GLK1(1)         =================MYC_MYB<---------ALFIN1 >>>>>>>>>MYB2 ----YAB1    <---------CCA1(2)      <---------At5g28300  --------->DAG2<---------YAB1    --------->WOX13(1)   atggttataactctgatatctgatcatctgggatgcttcaccgttgttacgtgtctcataaggctccaccatgattaaagaaaaccaaaatcaatctctg  28221600                                                                           --------->DAG2                                                                    <---------At4g35610                                    <---------ARR14(2)              --------->At4g35610                                    --------->ARR14(2)           <---------At4g35610                                 ----------->GT1                 --------->At4g35610             ----                                 <---------ANAC55(2)            --------->ALFIN1                <----                                 <---------ANAC46               <-----------RAV1(1)             -----                               <---------ANAC46             <---------ANAC55(1)                 <----                             --------->CCA1(2)              <---------ANAC58                    <----                       <-----------HVH21                    --------->ANAC55(2)                 <----                      --------->WOX13(1)                    <---------ANAC58                   <-----                   --------->ARR14(2)                       <---------ANAC46            --------->YAB1                   <---------ARR14(2)                       <---------ANAC55(2)      --------->WOX13(1)                  --------->GLK1(1)<---------CCA1(2)       <-----------------------TaNAC69(2) -------   tttctcactgaatccaaaacatatccatcagagacgcgtatattgtcgatttggattggaatacgtgtgctgcagaaaaattggaatcaatgagaataac  28221700                                <---------TOE1(3)              ----------------->AGL3              ----------------->AG              <-----------------AG              --------------->AGL15              <---------------AGL15              <-----------------AGL1        <-------TEIL   ----------->GT1 ----->TOE1(2)----------------->AGL1 -----ANAC58  <-----------------AGL2                  <---------ICU4 ---->ANAC55(2)--------------->AGL15                  --------->YAB1 -----ANAC55(2)<---------------AGL15         --------->ANAC58                ---------->DOF2 -----ANAC58  ----------------->AGL2         --------->ANAC58            ---------->DOF2       <----- -----ANAC46 <-----------------AGL1     ---------->DOF2              ---------->DOF2 --------->ICU4 ------------------TaNAC69(2)   <---------TOE2(3)  --------->YAB1---------->DOF2     <---------YAB1 -->MYB52(1) <-----------------AGL2    --------->AHL20(2)     <---------TOE2(3)   --------->WRKY18(1)   gtgagaaacattcattcccaaaatggggaaatttaaggcaataaaagaagcaaaaatcataactaatgaaagaaagaaagaaaggtcaagattgaaactt  28221800                                     --------->YAB1                             ---------->DOF2                            <---------WRKY38(1)    <-------TEIL   >>>>>>>>>>>>>>>>>LFY                            <---------WRKY45    --------->At4g35610                               ---        ----------->RAV1(1) <---------WRKY12<-----------GT1  <-----------ARR10      --------->ARR14(2) -----DOF2                 --------->WRKY18(1)  <---------At4g35610   <---------TOE1(2) --------->LBD16   tactcacttgccacaaaaacagagagatggtcaaagaaatcaaaatttacagatgcagaaacaaatctctccaatgttctatttagaaaccgcagagatt  28221900                                                                                           *TSS                                                                                --------->LBD16                                               ----------->GT1                <---------LBD16                             ---------->DOF2  <---------TOE1(3)             --------->ARR14(2)                   <---------AHL20(2)         <---------TOE2(3)             --------->GLK1(2)    ----------->GT1--------->AHL20(2)   --------->TOE2(3)           --------->TOE1(2)    ---------->DOF2 ------->DOF2    <---------AHL20(2) --------->MYB46(3)    --------->DAG2    <---------ARR14(2)    ---   gaaagaaggtgaaaactatatttttatatcacaaaggaacaacctttgaaggtaaaacaaaaattgaaaacctagaaaaatccggagagaagaaaggaga  28222000                                                                    <---------ARR14(2)                                                               ----------->GT1            ---------->DOF2                                  <------------CBF    ----------->GT1                        <-----------GT1 --------->AHL20(1)    --------->ANAC58             --------->LBD16           --------->AHL20(2)                <-------    --------->ANAC58     --------->At4g35610               <---------AHL20(2)             --------->TOE2(3)  ---------->DOF2        <---------At4g35610    --------->AtLEC2    --------->ARR14(2)    --------->YAB1 ------->DOF2    ---------->DOF2--------->HSFB2a(2)       --------->AHL20(2)            <---------YAB1   gaaagaaagcaaaaaaaaggaaagggaagctcacccagaaatttgtttccatccacaaaaaaaaattgtgaatttgcacaactagtgcttaatattaatc  28222100                                                                                        <---------MYB52(1)                                                                                       ==============                                                                                       <-------GAMYB                                                                                      ------>ZmHOX2a(2)                                                                                    --------->ARR11(3)                                                                                 ------>ZmHOX2a(1)                                                                             ================HOX2a_HOX2a                                                                             ------>ZmHOX2a(1)                                                                           =============HOX2a_HOX2a                                                                           --------->HSFC1(2)                                  --------->AHL20(2)                       <---------HSFB2a(1)                                  --------->YAB1                           <---------HSFC1(2)                                 <---------------AGL15                     --------->HSFB2a(1)                               --------->YAB1                              ------>ZmHOX2a(2)                             --------->AHL20(2)                           ==============HOX2a_HOX2a<-                         --------->At5g28300                              <------ZmHOX2a(2)        --                       --------->ANAC58                                  --------->ARR11(3)        --                       <---------ANAC55(2)                               <---------ARR11(3) =========                       --------->ANAC58                                  <---------ARR14(2)<---------ANAC58                       --------->ANAC46                                  --------->ARR14(2)<---------ANAC58                       --------->ANAC55(1)                     ==============================HOX2a_HOX2a                 --------->AHL20(2)                            <------ZmHOX2a(1) --------->HSFB2a(2)                 <---------AHL20(2)--------->AHL20(2)          ===================HOX2a_HOX2a      <- ------>ZmHOX2a(1)    <---------LBD16             <-----------RAV1(1)<-----------GT1<---------ARR11(3) ----GT1  --------->YAB1----------->GT1 ----------->GT1        ==================HOX2a_HOX2a<--------   ttcctgtctgaatcagaaattaaacacggaaaataataaaaatagcaaaaatttgtggccaagtaggatttttaagatccttcctagatcgttgctttcg  28222200                            --------->ATERF1(1)                           ------>NtERF2                          <---------DEAR3(1)                         <------NtERF2                       --------->ALFIN1                     <---------O2                     --------->O2                     <---------ANAC46                     <---------bZIP60(2)                    <------NtERF2                  --------->ALFIN1                  ----------->HVH21                 <-------MYC2                 ------->MYC2                <---------ANAC58                <---------ANAC46                <------NtERF2                --------->ALFIN1                <---------ANAC58                <---------TGA1a               ------>NtERF2<------NtERF2              <---------ANAC46             <------NtERF2----------->HVH21           ===============MYC_MYB           ---------->CDC5--------->ETT(2)           <---------DEAR3(1)        <---------ZAT2 <---------DEAR3(1)      <---------ZAT18<---------ANAC58     <---------ANAC58<---------ANAC58     <---------ANAC58<---------TGA1a =========================MYC_MYB --------ARR11(3)------->PIF5 ------->ARR11(3)<-------MYC3   ------->TEIL ------->AHL20(1)------->MYC3   --------->SPL7                                                  ----- =========================bZIP_DOF                                                         --------->RVE1(1) --------AHL20(1)<-------PIF5 <---------SPL7             --------->AHL20(2)            --------->AHL20(2) --DOF2 --------->ZAT2 <------NtERF2              --------->ANAC46 <----------DOF2 ---------->DOF2  -   atatattgcgagctcggcgcgtggcgtggcgacggaccccaattgatagtcccagcaaaaaaaatatgtcttttttgaagaaaacaaaagaaaatatcga  28222300                                  ----------->GT1                                  <----------ID1                        --------->ZAT14                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <-----------ARR10                    --------->ARR14(2)               <---------LBD16                    <---------ARR11(3)            <---------GLK1(1)                    --------->ARR11(3)     --------->WOX13(1)                                      --          ----------->GT1        ----------->GT1  --------->GLK1(1)                            <-----         ----------->GT1<---------ZAT14   <---------AHL20(2)          --------->GLK1(1)        ------  --------->ALFIN1  <---------ARR14(2)    --------->AHL20(2)     <---------ANAC46            -------- ----->DOF2    ---------->DOF2---------->DOF2 --------->YAB1   --------->ATHB12             <-------- -------->ALFIN1   <------ZmHOX2a(1)     --------->AHL20(2) --------->YAB1            <----------DOF2   aagtgtgtgagtcggaaaaaaggatctacagtgaaagggaaaaataaatcagaaatcgggaatagtgatgggaactcgatagaattgtctttttatgata  28222400                                                                 <-------MYC3                                                                 ------->MYC3                                                                --------->ANAC55(2)                                                                <---------ANAC55(2)                                                                --------->TGA1a                                                                <---------ANAC46                                                                <---------TGA1a                                                                <---------O2  <---------DAG2                                                                =========================bZIP_DOF                                                                --------->ANAC46     ------>MYB83                                                      ====================bZIP_DOF   ------>MYB46(1) ------->TOE1(2)             <------ZmHOX2a(1)        <----------DOF2 ------>ZmHOX2a(2) ----GLK1(1)      --------->ANAC58              --------->At4g35610 --------->ARR11(3) --->GLK1(1)      --------->ANAC58           <----------DOF2    --------->O2  <----------DOF2 ->YAB1       --------->ANAC58               =============================bZIP_DOF  ----------->RAV1(1) -YAB1        --------->ANAC58   >>>>>>>>>TBF1  <---------At4g35610 <---------ARR11(3)   tccaacgagaagagagaggcaagaaccaagaggaagaagaagatgggctcttctgactttctgatcacgtgatcttatccctttaccaacaaaacaaaac  28222500  Previous    Next  AGI:  At1g75180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47631.1); contains domain PTHR10996:SF1 (PTHR10996:SF1); contains domain PTHR10996 (PTHR10996) Range:  from: 28219497    to: 28221991    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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