Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                           <---------                                <-----------RAV1(1)                           <---------ANAC58                                --------->ALFIN1                              <---------ANAC58                     ----------->GT1<---------At4g35610               <---------At4g35610  <-------GAMYB         --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ZAT6<------ZmHOX2a(1) -----WOX13(1) <---------AHL20(2)   --------->At4g35610     --------->YAB1    <---------ANAC46      <   ttatagcacataaaaatttaaacttgtataatatgtgttgctgactataaacaaaaaaacaataacaactagagctaattgcgtaggagactcggttaca  28212700                --------->MYB46(3)              --------->MYB52(1)              ------>MYB46(1)             --------->MYB55(1)            --------->AtMYB61            <---------MYB111(2)            <---------MYB59            <---------MYB52(2)            <---------MYB111(1)            <---------MYB46(2)                                                           --------->ZAT18            <---------MYB55(2)                                                           <---------ZAT14           --------->ANAC46                                                              <---------ZAT18           --------->ANAC58                                                              --------->ZAT14  <------MYB46(1)<---------ALFIN1               ------>ZmHOX2a(1)                    <---------------AtSPL8  <------MYB83------>MYB83               <---------YAB1                    --------->ANAC58     ----- >ARR14(2) --------->ANAC58            --------->CCA1(2)                   --------->ANAC46 --------- --HVH21 <---------ALFIN1      <---------ARR11(3)                          --------->ANAC58 --------- ---------MYB52(1)             --------->AHL20(1)               <---------YAB1------->TEIL  ---------   cagttggtctcccacctaaccactccgattgtatatattagatatgattcctcgagtactactactataagtgttccacgtatatatgtagtacacgacc  28212800                                                                                             --------                                                                                             --------                                                                                             <-------      --------->ANAC55(2)                                                                <-----------HVH21      <---------ANAC58                                                                  <---------bZIP60(1)      <---------ANAC58                                        <---------RVE1(1)         --------->TGA2(1)      <---------ANAC55(2)                       <---------WRKY12                      <---------ICU4    <-----------GT1             --------->AHL20(2)            <---------CCA1(1)    <---------ICU4 ---->AtMYB61  --------->ARR14(2)    <-------TEIL            <---------ARR11(3)    --------->YAB1 >ANAC58 --------->ARR14(2)    --------->AHL20(2)            --------->ARR11(3)   --------->ICU4 >ANAC58 ------->TEIL          <---------AHL20(2)<---------DOF5.7(2)              <---------YAB1 >ANAC46 <---------ARR14(2)   --------->AHL20(2)<---------WRKY38(1)     ----------->GT1 --------->bZIP60(1)   acaatgtaacgtatccaaatattcgtatgcaaattaatatacatattttgtcaacgttttatagatatttctaagtgtaaatccatgattatgtcacatc  28212900                                                          ------>ZmHOX2a(1)                                                          --------->LBD16                       -----                                                        ----------->RAV1(2)                     -----                                                       ------>ZmHOX2a(1)             --------->ANAC58                                                     ------>ZmHOX2a(2)               --------->ANAC58                --------->AHL20(2)                  =============HOX2a_HOX2a         --------->ANAC46       <---------TOE2(3)                            <------ZmHOX2a(2)           --------->TOE1(2) ->TGA1a   --------->AHL20(2)   --------->CCA1(2)  ------->TEIL           --------->ANAC58     ------ ->bZIP60(1)   --------->AHL20(2)                  <---------ARR14(2)     <---------YAB1      <------ --bZIP60(1)   <---------AHL20(2)                  --------->ARR14(2)     --------->ANAC58   --------   agtatatataagattatataaattacacatagagagatgagatagattagatggatcctcctgaaatcgtgttctcacgatagctacgagcaaggagcac  28213000                          <------------CBF                  --------->MYB52(1)               <------NtERF2              ------>NtERF2                                                   --------->ICU4              --------->LBD16                                                 <---------YAB1 ---->ANAC58 --------->ATERF1(2)                                           ------>ZmHOX2a(1)        - ---->ANAC58 <---------RAP2.6(2)                                           ========================== --->ZAT18   <---------ATERF1(2)                               <---------ANAC46           <---------ARR11(3) ---ALFIN1   --------->DEAR3(1)               --------->YAB1   <---------ANAC58           --------->ARR11(3) ->At4g35610--------->ATERF1(1)  ----------->GT1               <---------ANAC58 <---------GLK1(2) *TSS   cctagttaataagagccggctaacagaaaattgagaagaaaaaaacaagaatagttttttttttttcgtagttaatcctcatgattctctaaaatctatc  28213100               <---------AHL20(2)              <---------AHL20(1)              <---------AHL20(2)              --------->AHL20(2)                                      --------->ANAC58       --------         --------->LBD16                                              --------->ANAC58  <---------YAB1        --------->ANAC46                                     <------ZmHOX2a(2)        --------->AHL20(2)        --------->ANAC55(2)     ====================================HOX2a_HOX2a   --------->AHL20(2)        <---------ANAC55(2)     <------ZmHOX2a(1)           <---------ARR14(2)    --------->AHL20(1)        ----------->GT1   ---------->DOF2         <----------DOF2     ----------->GT1 --------->YAB1 ----->ZmHOX2a(2)    <---------ANAC46 --------->TOE1(3)     --------->ARR14(2)    <---------AHL20(2) ======HOX2a_HOX2a  <---------LBD16   --------->TOE2(3) <---------LBD16          --------->AHL20(2) <   gatctctctcccgtaataaaatttcggagaaagaggaaaaccctaatcccctctttctctcggatcatcaacaagaaaaaaaaaaaaattataaatgaaa  28213200                <---------ARR14(2)                --------->ARR14(2)                                <------NtERF2             <---------------AGL15                               --------->LBD16             --------------->AGL15                              --------->ATERF1(2)            ----------------->AGL2                              --------->HSFB2a(2)            ----------------->AGL1                              <---------ANAC46            <-----------------AGL3                              <---------HSFB2a(2)            <-----------------AG                               <------NtERF2            ----------------->AGL3                             <---------LBD16            <-----------------AGL1                         --------->LBD16            <-----------------AGL2                         <---------At4g35610                      -            ----------------->AG                         <---------LBD16                        -----     <---------HSFC1(2)                                <---------ARR14(2)                      ------     --------->HSFC1(2)                        <-----------HVH21<---------ATERF1(2)            ------     <---------HSFB2a(1)                   <---------DEAR3(1)--------->ALFIN1                  ------  <------ZmHOX2a(1)                   ----------->ARR10--------->ARR14(2)                     >>>>>>> ->YAB1<----------DOF2              <--------P--------->ALFIN1------>NtERF2               --------->ANAC58 ---------TOE2(3)                  <-----------HVH21   --------->GLK1(2) --------->ICU4   --------->ANAC58   atgaggaagctttgtccaaatttggacagagaagacgggttagagacggtgttagaggttccggtgccggaagaaatgtttacaaagatgggaagcaacg  28213300                                                                                        <-----------TGA1                                                                                   <------NtERF2                                                                                   --------->TGA2(2)        <---------AtMYB61                                                         <-----------HVH21        --------->ALFIN1                                                          <-----------TGA1       --------->ATERF1(1)                                                        ------>NtERF2       <-------GAMYB                                                             --------->bZIP60(1)      <---------MYB46(3)                                     ------>NtERF2      <------NtERF2      <---------ANAC46                                      <---------RAP2.6(2) --------->ATERF1(1)      <---------DEAR3(2)                                    <---------ANAC46    --------->RRTF1(1)      <---------ORA47(2)                                   --------->ATERF1(1)  --------->RAP2.3(1)     --------->ALFIN1                                      <------NtERF2       --------->LBD16     <---------DREB2C(2)                                  ------>NtERF2        ------>NtERF2     <---------DEAR3(1)                           <---------At5g28300          <---------ATERF1(1)    <---------ABI4(1) --------->ANAC46          ----------->HVH21              <---------RAP2.3(1)    --------->ZAT18   --------->ANAC58       <---------MYB52(1)    <---------REM1(1)    <-----------HVH21 -------->MYB52(1)    --------->ANAC58  --------->ANAC58  <---------ATERF1(1) --------->DEAR3(1) -->GAMYB<---------MYB46(3) --------->YAB1  <-------GAMYB--------->ALFIN1     <---------DEAR3(1) --->ANAC58    ---------->TaMYB80       --------->ANAC46 <---------DEAR3(1)   <---------ATERF1(2) --->DEAR3(1)  <---------KAN4(2)        --------->ANAC58<---------ABI4(1)     --------->ATERF1(2) --->ANAC58  <------ZmHOX2a(1)  --------->RAP2.6(3)  <---------LBD16         --------->ATERF1(1) >>MYB2<------NtERF2 ------->TEIL     <---------ALFIN1<---------DEAR3(1)     <---------LBD16   cccaagggcggtggaggaatatgcacgctctcatgaaggcacacgccgttgtgaccgcggtggcgactgatgtaagaacgccggcgtcatcgtcatcgat  28213400                                                                        ------>ZmHOX2a(1)                       --------->YAB1        <---------ZAT18     <------ZmHOX2a(1)              ------->TEIL                  <---------RAP2.6(2)<---------TOE1(2)            <-------TEIL                    ---------->ID1     <---------TOE2(2)     <---------AtLEC2           --------->AtLEC2               <-----------RAV1(1)--------->TOE1(2)   <----------DOF2   gagtaatgtcaacatgcatttgcagtcaaaatcagacaacgagtttgtggccttgttgaaaatcgtaggaagtcctcttattccttttcatgtcccgctc  28213500                                                    --------->AHL20(2)                                                 --------->YAB1                                          <-----------ARR10                                          --------->ARR14(2)                                          <---------ARR11(1)                           --------->HSFC1(2)    <--------HAHB4                        ------->GAMYB     ------->TEIL                       --------->MYB46(3)<---------ARR14(1)                       --------->ANAC46  <---------CCA1(2)                     --------->MYB52(1)--------->ANAC58                   --------->MYB46(3)  --------->ANAC55(2)                   <---------ATHB12    <---------ANAC55(2)                  ------>MYB83         --------->ANAC58                  ------>MYB46(1)     <---------TOE2(2)                 --------->WOX13(1)   <---------TOE1(2)                --------->AtMYB61     --------->SPL7<---------AHL20(2)                          <----             ------>NtERF2<---------ALFIN1<---------ARR14(2)                              <---------bZIP60(2)            --------->LBD16<---------HSFC1(2)   <---------YAB1                  <---------DAG2 ------            <---------ETT(1)        <---------SPL7--------->TOE2(3)          <-----------GT1---------   gagttttgtctatcccgaccaatcaacgacacttccatcgtacgtatcttatcattaattcaatctattgatttttgtttaaccttttgatgaagtgggg  28213600  Previous    Next  AGI:  At1g75160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G05840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61175.1); contains InterPro domain Protein of unknown function DUF620 (InterPro:IPR006873) Range:  from: 28213098    to: 28215465    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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