Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <----------DOF2                                                                        ------>ZmHOX2a(1)                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)            ---                                                                    <---------ARR11(3)        -------                          --------->ATHB12                          <---------GLK1(2)         <------                        >>>>>>>>>>>>>>>>>LFY                        <-----------ARR10     <---------DEAR3(2)                        --------------->AGL15                       --------->ARR14(2)  <---------MYB52(1)                        ------>ZmHOX2a(1)                           <---------ARR14(2) --------->LBD16                        <---------------AGL15                     --------->LBD16     <---------ANAC58               --------->ANAC58                                 <---------LBD16       <---------ANAC58               --------->ANAC46                               <---------ARR14(2)   --------->GLK1(2)               --------->ANAC58                               --------->ARR14(2)  <---------ARR14(2)        <----------DOF2<-----------------AG              <---------HSFB2a(2)      <---------GLK1(2)    <-----------GT1 --------->ARR14(2)    <-------TEIL   --------->HSFB2a(2)      --------->ARR14(2) -GT1  <---------DAG2  <-----------------AGL1--------->AtLEC2<---------GLK1(1)   <---------At4g35610   tcgtcttcacctttctcacccaattcctccattggggaatcaaattcatgcacagtcgtctcgaaatccggatcctccttttcagattccgtcgtttcag  28211800                                                                   ------>ZmHOX2a(2)                                                          --------->AGP1                                                          <---------AGP1                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                          <-----------ARR10                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                          <---------GLK1(2)           <---------CCA1(2)                              <---------ARR14(3) --------->TOE2(3)                                       <---------CCA1(2)                          < --------->TOE1(3)                           <----------DOF2------>ZmHOX2a(2)                -------- ------>GLK1(1)                              <---------DAG2<------ZmHOX2a(2)           --------->ANAC58 -->HSFB2a(2)                   --------->ARR11(3)      ----------->ARR10              --------->ANAC58 ---HSFB2a(2)          --------->LBD16    <---------ALFIN1--------->ARR14(3)          <-------TEIL  -   aaaccctaatttcatctcttgtttccgaatcagagatttcgcttccacttttctcgcccagatcttcgatcgtctgattaaactcaggcacataatcaaa  28211900           ------>ZmHOX2a(1)        ------>MYB46(1)                 --------->DEAR3(2)      <---------MYB59             --------->ANAC58     --------->HSFB2a(1)          --------->ANAC58         --------->ANAC58     <---------HSFC1(2)           --------->ANAC46  --------->At4g35610     <---------HSFB2a(1)        --------->REM1(1) <-----------RAV1(2)     --------->HSFC1(2)         <---------ALFIN1 <------ZmHOX2a(2)    ------->TEIL--------->At5g28300     --------->MYB46(3) --------->ANAC58            -------->P ---------------AtSPL8         --------->ZAT14   ===============================HOX2a_HOX2a ->YAB1 ------>MYB83        ============================HOX2a_HOX2a      ------>ZmHOX2a(1) -------------->AtSPL8      ------>ZmHOX2a(1)   <---------ARR11(3)      --------->TOE2(3)   atcaagtaccttcctcgcggtaactccatcctctacacccaaaccgtcgagatcagatggaaccccatcttcttcctcaatcccatcgcaacccttcgca  28212000                                 <------NtERF2                               <---------DEAR3(1)                              --------->ALFIN1                              <---------MYB52(1)                              --------->ATERF1(1)                              <------NtERF2                     ======================HOX2a_HOX2a                             <---------SPL7                     <------ZmHOX2a(1)                             ------>NtERF2                     --------->ANAC46                             <-----------HVH21                --------->LBD16                            --------->DEAR3(1)               <---------HSFB2a(2)                         --------->ANAC46                    --------->HSFB2a(2)                      ------>ZmHOX2a(2)                    --------->CCA1(2)                     <------ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR11(3)                    --------->AGP1                    --------->AGP1                        --------->ARR14(2)                    --------->ARR11(3)                    <---------ARR14(2)                    <---------GLK1(2)                     --------->ARR11(3)                    --------->ARR14(2)            <---------HSFB2a(1)                    <---------ARR14(3)            --------->HSFB2a(1)                    <----------DOF2                    <-----------ARR10            <---------TOE2(2)             <------ZmHOX2a(2)                    --------->ARR14(3)           <---------TOE1(2)            <---------ARR11(3)                    <---------ARR14(2) <---------LBD16   <---------At4g35610  --------->ARR11(3)                  ----------->ARR10 <----------DOF2      --------->At4g35610 --------->GLK1(1)     --              -------->P------>ZmHOX2a(1)        <---------TOE1(3)     ------->TEIL  <-----------GT1   gactgcaattcagacttacccagatcctcgccgtcggggttttcggaatcgaaggtttcagatccaggacatgaatcggagatcaatttagctttcttca  28212100                                                         --------->YAB1                                                        <---------YAB1                                                   --------->At4g35610                          <---------ZAT18       ---------->DOF2                   --------->ARR14(2)        <------ZmHOX2a(1)                   <---------ARR14(2)  --------------->AGL15                           <---------SPL7                  <------ZmHOX2a(1)    <---------------AGL15                           --------->LBD16                --------->MYB59       ----------------->AGL2                          --------->DEAR3(1)            ------>ZmHOX2a(1)         ----------------->AGL1    --------->YAB1       <---------LBD16 ------->YAB1 <---------MYB52(1) <---------GLK1(2) <---------At4g35610       --------->YAB1   atcgtcttagcatcctgttaggaactgggacactcgattctccaataggagaaagctgatcatcgttcatcatcttcgattgtaatcgccggacaaaatt  28212200                                                                                                    -                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            <--------                                                                                            ---------              ------>NtERF2                                                             <---------GLK1(1)              <---------ZAT18                                                          --------->ARR14(2)         <---------At5g28300                                                           <-----------ARR10        --------->MYB52(1)                                                             <---------ARR14(2)    <---------ARR14(2)                                       ----------->GT1          <------ZmHOX2a(1)    <-----------ARR10                          <-----------HVH21                    <---------TOE2(3)    <---------ARR11(3)            *TSS        --------->ANAC58                  <---------ANAC58>>>>>    --------->GLK1(2)           <---------MYB52(1)         --------->DAG2       <---------ANAC58<----    --------->ARR14(2)        --------->MYB52(2)      ----------------->AGL1    <---------ANAC46>>>>>   <---------ARR14(1)       <---------MYB52(1)--------->ANAC58            --------->ATHB51<----------   <---------GLK1(2)<---------ATHB12     <----------ID1  ---------->DOF2  <---------AHL20(2)<--------   ggagagaatcttacggtgcccaatgtttctgttcgtttggaagaagacaagtcagtgccaaaagggtgaaaatgaataatttgcttgaggatttacgcgc  28212300 ----------->CBF >NtERF2 -->ANAC58 -->ANAC46 -->ANAC58                  <---------TOE2(3) -ANAC58                   <-----------GT1 >ANAC46          <------NtERF2                                       --------->LBD16 >>>>E2Fd        <---------RAP2.3(1)              <----------DOF2 <---------ARR14(2) --NtERF2        <---------ATERF1(1)      --------->DAG2          --------->ARR14(2) >>>>E2Fc        ------>NtERF2  ----------->GT1 <---------At4g35610  <---------ANAC46             --- -GT1           <---------RAP2.3(2)     ---------->DOF2          <---------GLK1(1)            <------ -ANAC58       ---------->ID1<---------ANAC46   --------->At4g35610  <---------ANAC55(2)      <------   caaacaattcgaattttggcgcctctattttacgttgaaaaaaaaaggtgagctttcttcgctatgcaattccgtcaaaaacaaaaattagaaactaaga  28212400                                                                            --------->AHL20(2)                                                                           <---------YAB1                                                                         -------->HAHB4      --------->AHL20(2)                                                 <---------ICU4     <---------AHL20(1)                                                  --------->YAB1     --------->AHL20(1)                 <---------MYB52(1)              <---------YAB1    --------->AHL20(2)                 --------->TOE2(3)         ----------->GT1          <---------YAB1  --------->AHL20(2)         --------->ICU4                    <---------ARR11(3)       --------->YAB1 ------>AHL20(2)    --------->ATHB12  ----------->GT1         --------->RVE1(1)         <---------ICU4 ---YAB1<---------AHL20(2)   <---------YAB1   <-----------GT1 --------->CCA1(1)   <-----------GT1  -- ---TOE2(3)        <---------YAB1     <---------ANAC46----------->GT1   --------->ICU4 --------->ICU4   ttaaaaatatatatatgcaatatgataggggataattgtttcgttaatttacaattttgtaaaaatatcgtaaaatgattatttataccattatgattca  28212500                                          <---------ANAC55(2)                               <---------ICU4        <---------YAB1                               --------->ATHB51     <---------TOE2(3)                              <---------YAB1     <---------WOX13(1)                       --------->AHL20(2) --------->ANAC55(1) <-----------GT1           --------->ANAC58 --------->YAB1--------->ANAC58    --------->YAB1           --------->ANAC58<---------ATHB12----------->GT1 --------->YAB1         ---------->DOF2<---------AHL20(2)--------->ANAC58<---------YAB1   ---------->DOF2 <---------YAB1        <---------LBD16 --------->AHL20(2)                     <---- ------->YAB1   --------->ICU4--------->ICU4   --------->ATHB12       <-----------GT1  --------->ARR11(3)   aatataaaagctaaagccattttgaataaatcataatttcgaacacggataattgatgatataataacaaatttagcacatattactaatatcgtttgat  28212600                                                                                            ---------                                                                                           <---------                                <-----------RAV1(1)                           <---------ANAC58                                --------->ALFIN1                              <---------ANAC46                     ----------->GT1--------->At4g35610               <---------At4g35610  <-------GAMYB         --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ZAT6<------ZmHOX2a(1) -----WOX13(1) <---------AHL20(2)   <---------At4g35610     --------->YAB1    <---------ANAC58      <   ttatagcacataaaaatttaaacttgtataatatgtgttgctgactataaacaaaaaaacaataacaactagagctaattgcgtaggagactcggttaca  28212700  Previous    Next  AGI:  At1g75150.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61179.1) Range:  from: 28208048    to: 28212234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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