Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->LBD16                                                                                        --------->ANAC58                                                                                        --------->ANAC46                                                                  --------->ATERF1(1)   --------->ANAC58                                                     <-------TEIL<---------ZAT2        <---------LBD16                                                    --------->GLK1(2)                --------->GLK1(2)                                                    --------->ARR14(1)           --------->HSFB2a(2)                                                    --------->CCA1(2)            --------->LBD16                                                   <---------GLK1(2)           ------>ZmHOX2a(2)                                                   <---------ARR14(2)         <------ZmHOX2a(2)                                                   --------->ARR14(2)        <---------ARR14(2)                                                   --------->ARR11(1)        --------->ARR14(2)     <                                                  --------->HSFB2a(1)       <------ZmHOX2a(1)     ---                               <----------ID1     <---------HSFC1(2)      <---------TOE1(3)      <---                ----------------->AGL1            <---------HSFB2a(1)     <---------TOE2(3)      ----                <-----------------AGL1            --------->HSFC1(2)--------->LBD16  <---------ARR14(2) ->AHL20(2)     <-----------------AG             ----------->ARR10<---------LBD16<---------HSFB2a(2)-   ttagttcaaagaaaacagacctgaattgggatggagacgaagtccctgaagaagattcgggtttgtgagccgggctaaggatccgagaacccggaagtga  28197100                                                        <---------SPL7                                                        --------->LBD16                                                        ----------->HVH21                                                       --------->DEAR3(1)                                                      <------NtERF2  --------->ARR14(2)                                                      <---------LBD16<---------ARR14(2)                                                     ------>NtERF2   ------->TEIL                                   --------->YAB1   --------->ANAC46 --------->ARR11(3)      --------->TOE2(3)           <---------ATHB12  --------->DEAR3(1)                              -    <-------TEIL     <---------ARR11(3)   <---------MYB46(3)         <-----------ARR10             -- ---------YAB1       --------->ARR11(3)   ----------->GT1    --------->At4g35610                   <- ------>YAB1        --------->CCA1(1)    --------->ALFIN1    <---------At4g35610--------->ARR14(2) <- ------YAB1 --------------------->WRI1--------->ATHB12--------->ATERF1(1)       <---------ARR14(2) <- ----->ICU4--------->ZAT6         --------->ICU4--------->DEAR3(2)  <---------CCA1(2)              <- -------->ICU4      --------->RVE1(1)<---------YAB1 <---------DEAR3(1)       --------->DEAR3(1)   <--   tgatgattcattaactctgaaaatatcgtcgaagaaatcatcagtggtgaaacgacgccggacagatgatgtatcttcgccgaatacaggcttctcgtct  28197200                                       --------->DEAR3(1)                                       <---------ANAC46                                      <---------LBD16                                      <------NtERF2                                    --------->DEAR3(1)                                    <---------DEAR3(1)                                 --------->O2                              ----------->HVH21                             <-----------TGA1                             <-----------HVH21                            <<<<<<<<<<HY5                            <---------TGA2(1)                            --------->TGA2(1)                            --------->ANAC55(2)                            <---------TGA1a                            --------->TGA1a                            --------->ANAC46                            --------->bZIP60(1)                            <---------bZIP60(2)                            <---------ANAC58                            --------->bZIP60(2)                            <---------ANAC58                   --------->DEAR3(1) --------->ATERF1(1)                =====================================bZIP_DOF                ======================bZIP_bZIP                --------->O2<---------O2  ---------->DOF2              ------>NtERF2 --------->O2--------->LBD16              <---------DDF1<---------ANAC55(2)              <---------ATERF1(1)====================bZIP_DOF             ----------->HVH21--------->TGA2(2)            --------->RAP2.3(1)  <---------O2          ------>ZmHOX2a(2)----------->STF1         <------ZmHOX2a(2) <-----------------------TaNAC69(2)        --------->ARR14(2) <-----------STF1        <---------ARR14(2)<---------TGA2(2)  <---------At4g35610    <---------At4g35610  ----------->TGA1<------NtERF2 -------->LBD16 --------->TGA1a  --------->TGA1a ------->HSFB2a(2) <---------DEAR3(1)------>NtERF2                <---------ANAC58                <-- --------ANAC46 <---------O2=========================bZIP_DOF     <---------ANAC46              <---- --------ANAC58 <---------TGA1a  --------->ANAC46                 <---------ANAC58       ============ --------ANAC58<------NtERF2<---------bZIP60(1)  <---------ARR14(2)           <---------MYB52(1)<---- --------HSFB2a(2) <---------ETT(2) --------->ANAC46            <-----------HVH21        --------->TOE2(3) -------LBD16--------->DEAR3(1)  <---------TGA1a --------->ARR14(2)   ----------->HVH21  <----------DOF2   tgcggaagcagatcgccgacgtcgacgatgacgtcacgacgccggagagcggattcactgaagctatgtcgtgtgacttcgttactagtaactttagagc  28197300                      <-----------HVH21                      <-----------TGA1                     --------->ANAC55(1)                     --------->TGA1a                     <---------TGA1a                     <---------ANAC55(2)                     --------->ANAC58                     --------->bZIP60(2)                     --------->ANAC58                     --------->ANAC55(2)                     <---------O2                    <------NtERF2                     --------->ANAC46                <---------LBD16                     --------->O2                   --------->MYB52(1)                    <-----------STF1                ------>NtERF2                   <---------ALFIN1                --------->DEAR3(1)        --------->At4g35610                 ------>MYB83                      <---------ALFIN1          <---------At4g35610                 ------>MYB46(1)                --------->ANAC46         <---------AtMYB61               <---------MYB46(2)           --------->TGA2(2)            <---------DEAR3(1)               <---------MYB55(2)          <-----------TGA1              --------->ALFIN1               <---------MYB111(1)         <-----------HVH21         <-----------RAV1(2)               <---------MYB111(2)        <---------O2             <---------ALFIN1               --------->MYB46(3)         --------->ANAC46       ----------->RAV1(1)           --------->MYB46(3)             --------->ANAC58       ================RAV         <------ZmHOX2a(1)                --------->bZIP60(2) --------->ANAC58         <---------PCF5                   --------->O2 --------->LBD16 <---------ZAT2      <------ZmHOX2a(1)--------->TGA2(2)  --------->ANAC58    --------->ANAC46 -------CCA1(2)--------->AtMYB61          --------->TGA1a     <---------ANAC55(2) -----ANAC58  --------->ANAC46           <-----------STF1     --------->ANAC55(2)                ---- ==============================bZIP_DOF  <-----------bZIP911(1) --------->ANAC46             -------- -----ANAC58--------->AtMYB61           <---------ALFIN1      --------->ANAC58      --------->ALFIN1   gtctcttaggaggaccaccaaacacgtcaccaaaatcgatgtccacgtcatcgccaccgggactacgcaacacaggtggtgctgagttggagcctaaaag  28197400                                                          --------->LBD16                                                         <---------ANAC46             <------MYB83                  <---------ARR14(2)             <------MYB46(1)               --------->ARR14(2)         <-------TEIL                 <-         <---------ZAT2                    --------->GLK1(2)         --------->CCA1(2)         <----- ----->MYB52(1)                 ---------->DOF2         <---------LBD16   <-------TEIL   ---------->DOF2 -->DOF2 --------->ZAT2 <---------AtLEC2  <---------GLK1(2)  *TSS<---------------------WRI1--------->DAG2   aacggtttctgagcttggtaatgtctgcatagcacaaagacacagaatttgcaattgctccggagagggagatacatacagaggctgaaacaaaaggctt  28197500                                                                       <-----------HVH21                                                                       <---------MYB52(1)                                                                      --------->LBD16                                                                    <---------LBD16           -------         ---------->DOF2                                        <---------HSFB2a(1)        --------->TOE1(3)     <----------ID1                                             --------->HSFB2a(1)        --------->YAB1   ---------->DOF2           <---------ANAC58                   <----------TaMYB80         --------->TOE2(3) --------TOE2(3)             <---------ANAC58          --------->AHL20(2)                --------->GLK1(2) -----DOF2                --------->ALFIN1       --------->TOE2(3)<-----------GT1       <---------GLK1(2)   taagaaaaagacaaagacagaggtaagagtggggttccatttgatttgaaaccacaaaaaaatgggattttccggtcattacagagagaagaatcttaaa  28197600                                                                                     <---------MYB59                                                                      --------->ARR11(3)                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                      <---------ARR11(1)                                                         <---------ANAC58       <---------ANAC58   <-                                                         <---------ANAC46       <---------ANAC58  ---                                                    ---------->ID1    <---------ARR14(2)          ---                    ----------->RAV1(1)         <----------DOF2      <---------CCA1(2)            <-- --->DOF2 ----------->GT1<-------TEIL    --------->ZAT6  <---------ANAC58    <----------DOF2    <----   gagtcttgtttgtggataaaacccacatacatccaaaactcttacactctctttgtcttccttgttcttccatatctctctttcttgcctaatctctcgt  28197700             <---------ICU4     <------ZmHOX2a(1)            <---------YAB1     ----------->GT1          --------->YAB1     <-----------RAV1(2) ------GAMYB--------->ICU4 <-----------HVH21                                             <---------WRKY45 ------>MYB55(2) <---------AHL20(2)                                                      <---------WRKY12 ------>MYB52(2)--------->AHL20(2)          ----------->GT1                              <---------WRKY38(1) -------MYB46(3)<---------AHL20(2)  --------->ICU4            <----------DOF2           --------->WRKY18(1) -----MYB52(1)  <---------AHL20(1)  <---------ATHB51---------->DOF2             --------->GLK1(2)   ttgttgtctctctcataatttttttttgtggtcaggaaataatgcatagttaaaaaaagagagacttttctgactaaataagaaactgtggtcaacaata  28197800                                                                                  <------ZmHOX2a(1)                                                                              =======================                                                                              ---------->DOF2  <-----                                               --------->GLK1(2)           <---------MYB59     ------                                              <---------GLK1(2)            --------->TOE2(3)  <------                                              <---------ARR11(3)          ----------------->AGL1  ---    --------->TOE2(3)              --------->ANAC46                    <------ZmHOX2a(1)   <---------YAB1   <---------ZAT6            --------->At4g35610                 --------->ARR11(3)  --------->MYB52(1)   ----------->GT1           <---------At4g35610              >>>>>>>>>TBF1--------->TOE1(3)---------   cagtattgttaataagactcttgagtttttcagctataggctacacaagattcttagtagagaagaagaactaggaacctaaaaggataactgattataa  28197900                                                                                        --------->ANAC46    <---------TGA1a                                                                     --------->ANAC58    ================================MYC_MYB                                      <---------ANAC58    --------->ALFIN1                --------->TOE2(3)                        <---------ANAC58    =====================================bZIP_DOF                            <---------ANAC58 =============bZIP_DOF        <----------DOF2                              --------->ARR11(3) ------GT1                 ------>MYB46(1)                   <---------WOX13(1)  <---------ANAC58 --->YAB1                  -------->P                      --------->ATHB12<---------ARR11(3) ---YAB1    --------->At4g35610   <-----------GT1         <---------YAB1  <---------GLK1(1)         < -------->RAV1(1)------->TEIL<---------DAG2        >>>>>>>>>TBF1          <---------CCA1(2)     <---- >YAB1--------->ALFIN1     ------>MYB83        <------ZmHOX2a(1)     <-----------GT1    --------->ANAC58   caacagatgtgggaagatgaaacttagcctaccttttttcttaactcgaggaagaagaagatgattgggtttttcgatatcttgcttaacaagcatccat  28198000  Previous    Next  AGI:  At1g75100.1    Description:  JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein binding. similar to AUL1 (auxin-like 1 protein), heat shock protein binding [Arabidopsis thaliana] (TAIR:AT1G75310.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94473.1); similar to Os03g0198300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049277.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) Range:  from: 28194477    to: 28197461    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g75110.1    Description:  RRA2 (REDUCED RESIDUAL ARABINOSE 2). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61198.1); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 28197776    to: 28199594    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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