Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <------ZmHOX2a(2)                                                                                          --------->GLK1(1)                                                                                          <---------GLK1(1)                                                                                         <---------AGP1                                                                                         --------->ARR14(2)                                                            --------->ANAC58             <---------ARR11(3)                                                           ------->TEIL                  <---------ARR14(2)                                                          <---------ALFIN1              <---------ARR14(1)                                                        --------->ANAC58                <---------CCA1(2)                                                ------>ZmHOX2a(2)                      --------->LBD16                                              --------->ARR14(2)                     <---------LBD16                                              <---------AGP1--------->ANAC58         ------>ZmHOX2a(2)                                              <---------ARR14(2)                    <------ZmHOX2a(2)                                              <---------ARR11(3)          --------->ARR11(3)                      ------->GAMYB          <---------CCA1(2)            <---------ARR11(3)                     <---------MYB52(2)    --------->HSFB2a(2)   --------->ANAC46  <---------ARR14(2)                  <---------WRKY38(1)    <---------At4g35610--------->At4g35610    --------->ARR14(2)      ----------->GT1--------->MYB46(3)  ----------->RAV1(2)--------->ANAC46  --------->MYB52(1) ---->YAB1     ------->GAMYB             --------->At4g35610<---------At4g35610 --------->MYB46(3) ----ATHB12--------->REM1(1)         <-----------HVH21  --------->ANAC58  <-----------ARR10------>ZmHOX2a(2)   atactcatgggttacaacagtcaacaaacacatctatctggtcatctggatctcaaactcgcacctcacaacacaatatctaaccgatccggatctcata  28181000                                                                                           <---------ALFIN1                                                                                         --------->SPL7                                                                                        <---------PCF5                                               --------->LBD16                          ------>NtERF2                                              <------NtERF2                            --------->LBD16                                              <---------ANAC46                         --------->DEAR3(1)                                             <---------LBD16  <-------TEIL           <---------LBD16<             <---------YAB1         ------>ZmHOX2a(2)     --------->AHL20(2)  --------->YAB1        -          <------ZmHOX2a(2)        <---------GLK1(1)      <---------AHL20(2) <---------YAB1--------->AtMYB61     <---------LBD16              <---------ARR11(3)     --------->AHL20(2)<---------GLK1(1)    <----    <---------ANAC58              <---------AGP1         <---------AHL20(2)--------->GLK1(1)   ------    <---------ANAC58              --------->ARR11(3) <---------YAB1       <---------ARR11(3)   ------    <---------ANAC46             <---------CCA1(2)<------ZmHOX2a(2)       --------->ARR11(3) <-------   ttcaattcgtggatcacaattagacacatctaattggatctcatagtcgcggatcacaattaaattcatctatacagatatcatactcgcggaccacaca  28181100                                                                                         <-----------                                                                                         ------------                                                                                        -------------                                                                                        -------------                                                                                        -------------                                                  --------->ANAC46                      <------------                                           <---------ZAT18                              <------------                                          <---------ANAC58                            <-----------GT1                                          <---------ANAC46                     <---------AHL20(2)                                          <---------ANAC58                   <---------RVE1(1)                                          <---------ZAT6                     <---------CCA1(1)  ----------->HVH21                     <---------ANAC46                    <---------ARR11(3) ---------ANAC55(2)                   <---------ZAT14                       <---------GLK1(2) -------->ANAC55(2)          <---------TOE1(3)  --------->At4g35610         --------->ARR11(3) -------HVH21                <---------TOE2(3)  <---------At4g35610       ----------->ARR10        -- --->bZIP60(2)         ------->TEIL   --------->ZAT18                     <---------YAB1------------- --->ANAC46          --------->ZAT14  --------->ZAT14                     <---------TOE2(3)        <- --ALFIN1          --------->ANAC46<---------ANAC46         <------NtERF2 <---------TOE1(3)  --------   tcacatgacataaaacatcacactgaaccctaaggtttagtgtagtgtgcatcagccatggccgagtcaaaatgttaagattttttttttaccatttata  28181200    --------->MYB52(1) ----AGL15                                                                                 <---------ICU4 --->AGL15                                                      --------->ANAC58           --------->YAB1 ---->AGL1                                                      --------->ANAC46          <---------ATHB12 ---->AG                                                        --------->ANAC58          --------->ICU4 ---->AGL2                                                 --------->WOX13(1)           --------->YAB1 -----AGL3                                              --------->ARR11(3)            <---------WOX13(1) -----AGL2                                              <---------ARR11(3)          --------->ATHB12 ------->ZAT14                ----------->GT1          --------->RVE1(1)           <---------AHL20(2) ---->AGL3                  ---------->DOF2            --------->CCA1(1)          <---------WOX13(1) --------ZAT14         ---------->DOF2         ---------->DOF2--------->YAB1     <------------CBF  <- ->YAB1   ----------->GT1--------->AtLEC2      --------->MYB52(1)              <---------YAB1<-------   gtaaactaatggaagtaaaaaccagtaatgcaaagaaaattcagagaaccaaaggaaatatctatcaagacaccaaaaattctaattgattaatcatgac  28181300            <---------ALFIN1           -------->P          ----------->TBP  <------NtERF2                 --------->ZAT14    <---------bZIP60(2)        --------->AHL20(2)     <---------YAB1    ----------->RAV1(1)    <---------bZIP60(1)      <---------------AGL15    <---------TOE2(3) <---------ALFIN1    <---------ANAC58 <---------MYB55(2)        --------->ABI4(2) --------->YAB1    <---------ANAC58 --------->DEAR3(2)    <---------DEAR3(1)    <---------ICU4          --------->ANAC58    --------->ANAC46 --------->MYB46(3)  --------->ARR14(2)     *TSS    --------->ANAC46 --------->ANAC58    <---------ANAC55(2) ------>MYB46(1)  <---------ARR14(2)     <---------YAB1<---------ZAT14    --------->ANAC55(2) ------>MYB83     --------->GLK1(2) --------->YAB1 --------->ANAC46    --------->bZIP60(1)----------->RAV1(1) ------>ZmHOX2a(2)  --------->YAB1--------->ZAT14 --------ICU4   --------->HSFB2a(2)     <------ZmHOX2a(1) <-------TEIL --------->MYB46(3)--------->ANAC46 --YAB1 <---------DEAR3(2)<---------ARR11(3)   ------>NtERF2  <---------ICU4<---------ZAT14   aacattacgtcgctacccctcgaaccaacatctataaatagaggatcggtgccattaacattcatcatcatcacccacagcacagagacacacacaaaaa  28181400                    --------->ARR11(3)                              --------->TOE2(3)                    <---------ARR11(3)                      <---------MYB52(2)                   --------->CCA1(1)                       --------->ANAC58                   --------->RVE1(1)         ------>ZmHOX2a(1)<-----------GT1             ----------->GT1       <---------GLK1(2)       --------->ANAC46           <XXXXXXXXXXXXXX      --------->AHL20(2)        <-----------GT1            --------->ANAC58   --------->ANAC58      <---------AHL20(2)     --------->ARR14(2)            --------->ANAC55(1)--------->ANAC58   acccataaaaaaatatggcaaatatctccagtattcacattctcttcctcgtgttcatcacaagtaacaacatcaaacacactctatttctgtttcttct  28181500                                      <-----------GT1                                   <--------HAHB4                                   --------->ATHB51                                  --------->ICU4                                  <---------YAB1                               <----------DOF2                                --------->YAB1                        <------ZmHOX2a(1)                             <----------DOF2     ----------->RAV1(2)<---------TOE2(3) XXXXXXMIR415     <---------CCA1(2)<---------ICU4<---------At4g35610<---------TOE1(3)               <   ctgtttcacttatatatgtcttatctttctcctttcattattacattcttcacctgttttgtctgtttttaaggagaatagctttcaatactgtttctta  28181600                         <----------DOF2                       --------->ATHB51             --------->ATHB12                                  <---------ICU4              <---------TOE2(3)             <---------ICU4                                   --------->ICU4     <---------ANAC58            <---------YAB1                                    <---------MYB52(1) <---------ANAC58          <---------At4g35610               <------ZmHOX2a(2) <---------YAB1     <---------ANAC46    <----------DOF2<----------DOF2   <---------YAB1     <---------ZAT18          <---------ANAC55(2) -----------GT1   <------------------------ANAC81       --------->ZAT18          --------->ANAC55(2)-   agtttccttttctgatgatttctttttcttttgttcatcatcttagatcacaacatattgcaccattatttctcaaaattgtttcgtatttttgatgttt  28181700                                                                                      <---------GLK1(1)                                                                                     --------->ARR14(2)                                                                           ----------->RAV1(2)                                                                          <-----------HVH21                              <---------MYB52(1)                      --------->AtMYB61                     <------NtERF2                                   <---------MYB55(2)             -                    ------>NtERF2                                   -------->P      <------NtERF2   -                   <---------ATERF1(2)                 <------ZmHOX2a(1) --------->DEAR3(1)       <--                   --------->ATERF1(2)               --------->ANAC46--------->MYB46(3)<---------HSFB2a(1)                   <---------DEAR3(1)                <---------TOE2(3)<---------ALFIN1--------->GLK1(1)                  --------->ATERF1(1)           --------->ZAT6      ------>MYB46(1)<------NtERF2 ----                 <---------ATERF1(1)         --------->ZAT14        --------->SPL7 --------->LBD16<--               <-----------RAV1(2)   ----------->RAV1(1)            ------>MYB83  --------->RAP2.6(2) --------->ID1--------->ZAT14<-------GAMYB   <---------ZAT14   --------->ZAT18   <---------LBD16<----   ttgtttttttttaaactgcaggcggcattgctgttatggccacagacttcactctaaggaacaattgccctaccaccgtctgggccggaactctcgccgg  28181800                                                                --------->At4g35610                                                           --------->ANAC58                                                           --------->O2                                                           --------->ANAC46                                                           --------->ANAC58                                                      --------->ZAT2                                                  ------>NtERF2------>NtERF2                                                  <-----------HVH21                                                 ----------->HVH21                                                 <---------ETT(1)            <---------DEAR3(1)                   --------->LBD16----------->RAV1(2)         <---------ZAT2                          --------->ANAC46 ------>ZmHOX2a(1)         --------->ZAT2                         --------->HSFB2a(2)        --------->ANAC58                        <---------HSFB2a(2)        --------->ANAC58                    <---------ANAC58   <---------ATERF1(1)   <---------ARR14(2)  <------ZmHOX2a(1)                      <-------PIF5 --------->At4g35610            --------->ARR14(2) -------->ANAC58                         ------->PIF5 <---------At4g35610          <---------DEAR3(2) -------->ANAC58        --------->ARR14(2)  <---------ANAC58  <---------ARR14(2)  <---------DEAR3(1) -------WRKY12 <---------DEAR3(1)       <---------At4g35610--------->TGA1a<------MYB46(1) ----->WRKY18(1)        <---------ARR14(2) <-------TEIL ----------->HVH21 <------MYB83 -------WRKY38(1)      <------ZmHOX2a(1)<---------ZAT2<---------ZAT2   <------ZmHOX2a(1) -------HVH21 <------NtERF2           <-----------RAV1(2)--------->MYB52(1)<-----------HVH21        -   tcaaggacccaagctcggcgatggaggatttgaattgactccaggtgcttcccgacagctcacggctcctgcaggatggtcaggccggttctgggctcgt  28181900  Previous    Next  AGI:  At1g75040.1    Description:  PR5 (PATHOGENESIS-RELATED GENE 5). Identical to Pathogenesis-related protein 5 precursor [Arabidopsis Thaliana] (GB:P28493); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G75050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70296.1); similar to SCUTL2 [Vitis vinifera] (GB:AAF06347.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 28181364    to: 28182601    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version