Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------AHL20(1)                                                        <---------AHL20(2)             <--------P                                                        --------->AHL20(1)      <---------AHL20(2)                         <---------DAG2           --------->YAB1                --------->AHL20(2)                      <-----------GT1  <---------TOE2(3)--------->ARR11(3) <---------ICU4         <-----------GT1 <----------DOF2<---------MYB46(3)          --------->ZAT6   ----------->GT1 ---ATHB12        <---------AHL20(2)   <---------YAB1 <---------AHL20(1)  <---------ATHB12   attgttctatattactatattttataactttttaaaactctatggttgaataacataatattttgttttaacacaaatcattttaaatggtagattgaat  28166900                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                --------->AHL20(2)                               --------->DOF5.7(2)         --------            ----------->GT1                                  --------->MYB52(1)              <-------     <---------MYB52(1)                                 <-----------GT1                <---------TOE2(3)     ------>ZmHOX2a(1)                --------->ICU4<---------AHL20(2)           <---------MYB46(3)    --------->TOE2(3)      ---------->DOF2          --------->AHL20(2)           ----------->GT1   acacttccttagttttgaaaaaatacactaaaagtatgaaatgatgttttttttttaattacaaaacgataactcgaaaacgatggtttaatgaaattat  28167000                                                                 --------->ATHB12        --------->DAG2                                          <---------YAB1 -->ATHB51                                                 ----------->HVH21 -->ATHB12                ------>ZmHOX2a(1)           <---------WRKY18(1) ---AHL20(2)             --------->TOE2(3)           --------->WRKY12                 <-----------GT1 -->AHL20(2)   --------->YAB1                        --------->WRKY38(1)             --------->AHL20(2) ->ICU4---------->DOF2   --------->TOE1(3)           --------->WRKY45           ------------>CBF    - --AHL20(2)   <---------YAB1                       <----------DOF2       ------>ZmHOX2a(2)  ---------   ttgatgaaataaagttatcataaacatccttaatctcttcttatacatgtcaactttgaccatgacatgaatggatcgcattcccaatttactaacacaa  28167100              --------->ANAC58              --------->ANAC46              --------->ANAC58--------->AHL20(2)          <---------GLK1(1)   <---------AHL20(2)            --------->ANAC58           <---------TOE2(3)        <------ZmHOX2a(1)    --------->YAB1                 --------->ANAC46          ---------->DOF2       ----------->GT1      ----------->TBP       ----------->GT1                    <---------AHL20(2) -------->AHL20(2)        <---------ZAT6     <---------DEAR3(1)                      --------->AHL20(2) >ZAT6<---------TOE2(3) ----------->GT1 ---------->DOF2     --------->ANAC58     --------->AHL20(2)   aaaaaaatgaggaaatacgaaaacagtagtataaaaatagagcaaagccggtgagaaaaaacaagaaacacagaaacagaacataaattaaagaagactc  28167200                                                                                  <---------MYB55(2)                                                                           ----------->RAV1(1)                                                        <---------DAG2    --------->ANAC46     ------                                      --------->At4g35610               --------->ANAC58    ------>ZmHOX2a(2)                                      <---------At4g35610               --------->ANAC46  <---------ARR11(3)                      ------>ZmHOX2a(1)           <<<<<<<<<TBF1    --------->ANAC46<---------ALFIN1       --------->GLK1(2)            ---------->CDC5     <----------DOF2 --------->ANAC58  --------->ARR11(3)      <---------GLK1(2)  ------>ZmHOX2a(1)     <<<<<<<<<TBF1  <----------DOF2     --------->MYB46(3)   acattcaagaatctctctcttctcctcctctcattctctcagcggcttcttcttcttcctttttctttcacatcacacaacacaaccactgtgatcttga  28167300                                                                                          <-------PIF5                                                                                          <-------MYC3                                                                                          ------->MYC3                                                                                          <-------MYC4                                                                                          ------->PIF5                                                                                          <-------MYC2                                                                                          ------->MYC4                                                                                          ------->MYC2                                                                                         --------->TGA1a                                                                                         <---------O2                                                                                         ============                                                                                         --------->O2                                                                                         --------->PIF3(3)                                                                                         <---------TGA1a                                                            <---------MYB52(1)           <---------PIF3(3)                                                    <---------DOF5.7(2)                  --------->ANAC46                                                 --------->TOE2(3)               --------->ANAC58                                                 ==================================================MYC_MYB                                                 <-------GAMYB                   --------->ANAC58                                                 --------->TOE1(3)               --------->ANAC46                                                <---------MYB46(3)             ------>ZmHOX2a(1)                                             ------->GAMYB <-------GAMYB      --------->TOE1(2)                                            <---------MYB52(2)          ------->GAMYB  <---------ALFIN1         --------->YAB1                     --------->MYB46(3)          ===========================MYC_MYB        ----------->HVH21           --------->HSFC1(2)     ========================================MYC_MYB        <---------ATHB12       <---------------------WRI1 <---------ANAC58    --------->TOE2(2)        ----------->TGA1       <---------LBD16  ------>ZmHOX2a(2)     ------>MYB46(1)------>NtERF2    ------------>CBF           <---------At4g35610<---------MYB52(1)  -------->P--------->SPL7    <---------YAB1       --------------->AGL15 <------ZmHOX2a(2)      =============================MYC_MYB  <-----------GT1       <---------YAB1  --------->MYB46(3)<---------ANAC58 --------->ARR14(2) --->ATHB12      <-------TEIL  --------->At4g35610--------->DOF5.7(2) ------>MYB83------>NtERF2 <----   tttgttaccaatgacgacgttcaattactatttagcggagcatccaacgatcgttaacttccgttggagtccaacccaatcctacgcctccacgtggtct  28167400                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                          --------->LBD16                                                                                         <------NtERF2                                                                                        ------>NtERF2                                    <-----------HVH21                                   <------NtERF2                                    <-----------TGA1                                    --------->LBD16                                    ------>NtERF2                                       <---------LBD16                                    <---------RAP2.6(3)                                 <---------At4g35610                                   --------->bZIP60(1)                                 --------->DEAR3(1)                                   --------->O2                                        <---------ANAC46                                   --------->RRTF1(2)                                 <------NtERF2                                   --------->RRTF1(3)                                 --------->RAP2.3(1)                                   --------->ANAC46                                   --------->ATERF1(1)                                   --------->ATERF1(2)                               <---------ATERF1(1)                                   --------->DEAR3(1)                                ------>NtERF2                                   <---------ATERF1(2)                               <---------RAP2.3(1)                                   --------->RAP2.6(2)                               --------->ABI4(1)                                   --------->RAP2.3(2)                              <---------ALFIN1                                   --------->RAP2.3(3)                              <---------DEAR3(1)                                  --------->ERF1                                    --------->DEAR3(1)                                  <------NtERF2                                     --------->RAP2.3(2)                                  --------->ATERF1(1)                               --------->RAP2.6(2)                                  --------->RRTF1(1)                                --------->RRTF1(2)                                  --------->RAP2.3(1)                               --------->ATERF1(2)                                 <---------ATERF1(1)                                --------->RRTF1(3)                                 --------->ABI4(1)                                  --------->RAP2.3(3)                                 ------>NtERF2                                      <---------ATERF1(2)                                --------->RAP2.3(3)                                 --------->ANAC46            ------>NtERF2       --------->RRTF1(3)                                 --------->RAP2.6(1)            <-----------HVH21   --------->DEAR3(1)                                 --------->ATERF1(1)           --------->RAP2.3(2)  <---------DEAR3(1)                                 --------->RRTF1(1)           --------->DEAR3(1)   --------->ANAC46                                   --------->ERF1          --------->DEAR4(2)    --------->RAP2.3(2)                                --------->RAP2.3(1)          --------->RAP2.3(1)  --------->ORA47(2)                                  --------->DEAR4(2)         ------>NtERF2         --------->RAP2.3(1)                                 --------->ORA47(2)         --------->ABI4(1)     --------->ERF1                                     <---------ATERF1(1)        --------->DEAR3(1)     --------->ATERF1(1)        ------>ZmHOX2a(1)      --------->DEAR3(1)        --------->ANAC46       --------->DEAR4(2)     <---------ALFIN1           --------->ANAC46       --------->MYB46(3)    --------->DEAR3(1) <---------ALFIN1                 ------->GAMYB      <---------At5g28300 <---------ICU4        --------->AtMYB61------->GAMYB  --------->MYB46(3)   <-----------HVH21   --------->REM1(1)     <---------ALFIN1 <-----------GT1   --------->DEAR3(2) ------>ZmHOX2a(1)--------->At4g35610<------NtERF2  ------>ZmHOX2a(1)           <------------AtMYB77 ======bZIP_DOF   <---------At4g35610<---------MYB52(1)------>ZmHOX2a(1)        <---------MYB55(2) ------DOF2--------->RAP2.3(3)<---------ATERF1(1)  <---------ALFIN1            <---------At5g28300   ttcctcttcaccgccgtctcatcttacatcatcgccgccgtcactctccacctcctcctcctcataaccctctccctctctaaccgccgccgcggattct  28167500                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                  ----------->RAV1(1)                                                                                 <-----------RAV1(2)                                                                                 <------NtERF2                                                                                <---------At4g35610                                                   <------NtERF2                <------NtERF2                                                  <---------RAP2.6(3)           ------>NtERF2                                                  ------>NtERF2                 --------->At4g35610                                                  <-----------HVH21            --------->DEAR3(1)                                                 --------->RAP2.3(3)           ----------->RAV1(1)                                                 --------->RRTF1(2)            --------->RAP2.3(2)                                                 --------->DREB2C(2)           --------->RRTF1(2)                                                 --------->RAP2.3(2)          --------->RRTF1(1)                                                 --------->RRTF1(3)          --------->LBD16                                                 --------->RAP2.6(2)         <---------ATERF1(1)                                                 --------->DEAR3(1)          --------->At4g35610                        <---------At4g35610     --------->RAP2.3(1)          ------>NtERF2          -                        --------->At4g35610     --------->ERF1          ------>ZmHOX2a(1) <------ZmHOX2a(2)                    --------->ANAC46            --------->RRTF1(1)      =========================HOX2a_HOX2a                    <---------ALFIN1           <---------ATERF1(1)     <---------ALFIN1 <---------GLK1(1)                   <---------ZAT14             ------>NtERF2         ------>ZmHOX2a(1)  --------->GLK1(1)                   --------->ZAT14             --------->LBD16       ============================HOX2a_HOX2a                   <---------REM1(2)          --------->DEAR3(1) --------->ARR14(2)<---------ZAT2   <               --------->AGP1                 --------->ANAC46   <---------ARR14(2)--------->ZAT2  --              <---------ZAT2            <---------ICU4 <---------ARR14(2)   --------->DEAR3(1)     <- -ARR14(2)    <---------At4g35610       <---------GLK1(2)     <---------DEAR3(2)--------->LBD16    -- -GLK1(2)     --------->ZAT2<-----------GT1  <---------LBD16 <---------TOE1(2)--------->RAP2.3(1)  -- >ARR14(2)    --------->At4g35610    --------->TOE2(3) --------->ARR14(2)   --------->ANAC46     ----   ccctcggtccaatcccagctctacacagcttaaccatttccataatctccgccgtcatattcgtcggtatcctcctctccgccgcagcagagatcagaga  28167600                           --------->AtMYB61                           <---------ALFIN1                          --------->MYB46(3)                         ----------->RAV1(1)                        --------->ANAC46                        <---------ALFIN1             <---------ANAC58                                       ------->MYC3             <---------ANAC46                                       <-------MYC2             <---------DEAR3(1)                                     <-------MYC3             <---------bZIP60(2)                                    ------->MYC2      <------NtERF2   --------->ANAC58                             --------->ANAC58     ------>NtERF2<---------ALFIN1                               <---------ALFIN1     <---------MYB46(3)--------->LBD16                      <---------TOE2(2)    <---------DEAR3(1)--------->ANAC58                    --------->LBD16        <---------ANAC58    --------->ALFIN1 --------->MYB46(3)                   <---------MYB52(1)     <---------ANAC58   --------->At5g28300--------->ANAC46                  <---------LBD16          --------->ANAC55(2) <---------DEAR3(1)--------->PCF2                       --------->HSFB2a(2)<---------HSFB2a(2) ------>MYC3 --------->bZIP60(1)           --------->ARR14(2)<------MYB46(1)     <---------ANAC55(2) -------MYC3 <---------bZIP60(1)           <---------ARR14(2)<------MYB83 <---------------ANT ------->ANAC58  <---------SPL7          <---------MYB46(3) <---------TOE1(2)    <---------ANAC46 --------O2  <---------ANAC58  <---------ZAT18      <----------DOF2--------->ANAC58 ------->ANAC58<------NtERF2   --------->ZAT14 <---------At4g35610 --------->ANAC46                -- ------->ANAC46--------->ATERF1(1)      <---------ATHB12<---------HSFB2a(2)--------->HSFB2a(2)  <---- ----->CCA1(2)<-----------HVH21<---------ZAT14 ------>ZmHOX2a(1)<-------TEIL----------->HVH21<-------   cacgcggtggctatggcgtcgcacccgcaccactgctctccaatggttcctctgctttcccgtaggtacacgcgcttcgggacgcgtgttcttctggtca  28167700                                                --------->LBD16                                              <---------LBD16                                 <---------ANAC55(2)                                 <---------ANAC46           <---------ANAC46                                 <---------ANAC58        <---------bZIP60(1)           --------->WOX13(1)                                 <---------ANAC58        --------->O2           <---------ZAT2      <-----------GT1            --------->ANAC55(2)--------->CCA1(2) --------->At4g35610    <----------DOF2             --------------->AtSPL8   <---------O2 <---------At4g35610--------->MYB46(3) ------->ANAC55(2)              --------------->AtSPL3   --------->bZIP60(1)    <---------At4g35610 -----SPL7        --------->GLK1(2)   <----------DOF2 ----------->HVH21<---------GLK1(2)-------->P ----HVH21       <---------GLK1(2)--------->LBD16----------->HVH21    <---------ZAT2   <-----------GT1   tacgcgttttacctctcaagattccttcacttgttccgtactttcttctccgtgatacgacgtcgtaaactcagcttcttccagcttatcaaccagtctt  28167800  Previous    Next  AGI:  At1g75000.1    Description:  GNS1/SUR4 membrane family protein. similar to GNS1/SUR4 membrane family protein [Arabidopsis thaliana] (TAIR:AT4G36830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61221.1); contains InterPro domain GNS1/SUR4 membrane protein; (InterPro:IPR002076) Range:  from: 28167311    to: 28168247    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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