Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->AHL20(2) --------->AHL20(2)                              <---------AHL20(2) ------->GT1                       --------->GLK1(2)   <---------HSFB2a(2) -------ID1                    --------->YAB1    <---------ICU4                                    <- ---->DOF2                  --------->YAB1      <---------ATHB12                                  <-- >AHL20(2)                 --------->ZAT6       --------->AHL20(2)                                ---   agaaaaaataaaaaccactagctaaactaatactaataatctaggtgctaataaatactagaaaacaatccacatttcaagtatagatgaattggtctat  28149300                                                  --------->AHL20(2)                             ----                                                  <---------AHL20(2)               <---------AHL20(2)                                                 --------->AHL20(2)              <---------AHL20(2)                                  <---------AHL20(2)                            <---------AHL20(2)                                  <---------AHL20(1)                 --------->REM1(1)    --------->TOE2(3)           --------->At5g28300    --------->AHL20(2)     <---------AHL20(1)     --------->AHL20(1)          ----------->GT1         --------->AHL20(1)     --------->AHL20(1)     --------->ARR11(3)   --------->AHL20(2)            --------->AHL20(2)     --------->AHL20(2)      <---------AHL20(1) --------YAB1                    <---------AHL20(2)   --------->AHL20(2)        <---------ARR11(3) -------AHL20(2)           --------->ZAT6    <---------AHL20(2)     <-------TEIL--------->AHL20(2) ------>AHL20(2) --------->AHL20(2)         --------->AHL20(2)  <---------------AtSPL8 <-----------GT1   taatataaaatacggtgaattaaaaaataacacaattaaatttacataaaatttaaaaatatatatcaggtacatcacagaatatatttttacattagag  28149400                                                                                   --------->ANAC58                                                                                <---------ZAT18                                                                                --------->ZAT14                                                                               <---------ALFIN1                                                                               --------->AtMYB61                                                                             ------>MYB46(1)                --------->AHL20(2)                                      <-----------HVH21                --------->YAB1                                      --------->MYB52(1)               <---------ATHB51                                    ------>ZmHOX2a(1)               <---------ATHB12                                    <---------REM1(2)           ------           ----------------->AGL3                              --------->ARR14(2)  --------->ANAC46        <---------GLK1(1)                                      <---------PCF2-------->P   --------->AHL20(2)        --------->GLK1(1)                 <---------ARR11(3)   <---------ARR14(2)  --------->ANAC58       <---------GLK1(2)                  --------->ARR11(3)   --------->TCP15(1)<---------ALFIN1       --------->ARR14(2)     --------->RVE1(1)             --------->ALFIN1------>ZmHOX2a(1) ------- ------>DOF2--------------->AGL15     ---------->DOF2     <-----------RAV1(1)------>MYB83<---------ATHB12   aaagtcttggattcccaataatataaaacaaaatatcagaaaaagacatttgaattcttgatgtgggtcctcacggtcctaccacactccaatgaaatgc  28149500                                               <---------ARR11(3)                                               <-----------ARR10     -------->ATHB1                                               --------->ARR11(3)    --------->YAB1                          --------->ANAC55(2) --------->RVE1(1)      <---------ICU4                          <---------ANAC55(2) --------->CCA1(1)      <------------ATHB5                     <---------ICU4         --------->AHL20(2)       <--------ATHB1                     -------->ATHB1         --------->YAB1           --------->ATHB51                     --------->ATHB12     --------->AHL20(1)        <---------ATHB51                     <--------HAHB4       --------->AHL20(2)        --------->ICU4                     --------->YAB1      --------->YAB1             <---------ATHB12     ---------->DOF2<---------ATHB12   --------->AHL20(2)     <---------CCA1(2)         <---------AHL20(2) ----->GT1          --------->ICU4 ----------->GT1       <---------ZAT2   <---------ANAC46 -->ICU4     ---------->DOF2     ---------->DOF2         <---------At4g35610            --------->AHL20(2)   ttaaaaaaaaagaagaaaaggaatcattacataagaaaagaaaaaataatatctgagcctgctcatatcaataattgtgtatatatagaattatatagat  28149600                                                                                     --------->YAB1                                                                                     <---------ICU4                                                                               --------->TOE2(3)                                                        <---------MYB46(3)    --------->YAB1                                            --------->YAB1                    --------->ATHB12                                            -------->HAHB4                    <---------ICU4                                            <---------ICU4                    -------->ATHB1---------                                           <---------ATHB51      <---------HSFB2a(2)<---------ATHB12                                           <---------YAB1        --------->HSFB2a(2)<---------YAB1                                           --------->ICU4     <---------MYB52(1)  --------->YAB1                                       --------->AHL20(2)   <---------MYB46(3)<--------HAHB4---------                            --------->AHL20(2)       <---------MYB46(3)      <---------ATHB12                 ------>MYB83          --------->AHL20(1)----------->TCP11(1)--------->ICU4--------->ZAT18       ---------->DOF2      <---------AHL20(2) --------->YAB1<---------RAP2.6(3)<---------YAB1  <---------ETT(2)     <---------ARR11(3)--------->YAB1--------->ALFIN1    --------->WOX13(1) -------  ----------->GT1------>MYB46(1)      --------->YAB1<---------AtMYB61    ------------>CBF  <---------ZAT18   gatgtcgataaaagaaaccaaacaagataaataaatacaaaaataataatggtgatggtgggccgttctataaacttcaatcattaatcatagcacacaa  28149700                         --------->ZAT18                     --------->ATHB12                    <---------YAB1                                                        <----------DOF2                    *TSS <---------ZAT18                                           --------->GLK1(2)                 <---------AHL20(2)                                               <---------GLK1(2)                <---------AHL20(1)                                             --------->YAB1  ------ >ANAC58        --------->AHL20(2)                 <----------DOF2     <<<<<<<<<TBF1  <----------DOF2 >ANAC58        --------->AHL20(1)                <---------DAG2    <<<<<<<<<TBF1 --------->ARR14(2) -->ANAC46     --------->YAB1        ---------->DOF2            ------>ZmHOX2a(1) <---------ARR14(2)   aattccaaacttgagaaatataatcagtgggctaaactctaaagtctctctacctttctccatctccttcttcttcttctatcagattctttctttccta  28149800                                                                 <---------AHL20(2)               <<<<<<<<<TBF1      <---------CCA1(2)    <---------At5g28300                --------->ZAT6  <----------DOF2           <----------DOF2           <-----------GT1           ----------->RAV1(1) --------->TOE2(3)   <----------DOF2      ------>ZmHOX2a(1)  <---------AHL20(2)--------->MYB46(3)<<<< >ZmHOX2a(1)<<<<<<<<<TBF1 ------>ZmHOX2a(1)        <----------DOF2  <----------DOF2     <-----------GT1   ttacctttgccttcttcttcttcctttcctctttctctatcttcctctcaattcttttactgtttattttctttgtaatcaacaacagtttaactcttct  28149900                                                                            <---------MYB52(1)                                                                           --------->LBD16                                                  --------->ANAC58        --------->ANAC55(2)                                                  --------->ANAC58        ----------->GT1       <---------------AGL15               --------->YAB1                 <---------ANAC55(2) <------       <----------DOF2                    <---------YAB1                  <---------ANAC46    <------MYB46(1)       --------------->AGL15            <---------ICU4                   ------>ZmHOX2a(2)    <------MYB83  <----------DOF2                       --------->YAB1                -------->HAHB4          <------ <<<<<TBF1                             --------->ICU4                <---------ATHB12    --------->ARR11(3)   tcttcttttctttatcaagaacagtagtttctcaattcttgattatgatactaagcaagagacctcatctaatgatccgtaaattgtctgagatgttggt  28150000             --------->At4g35610           ------>ZmHOX2a(2)           ===========================HOX2a_HOX2a          <------ZmHOX2a(2)          --------->CCA1(2)          ============================HOX2a_HOX2a         <---------ARR14(2)         <-----------ARR10         <---------ARR11(3)         --------->ARR11(3)         <---------AGP1                                                             <---------ZAT18         --------->ARR14(3)           --------->ANAC58                              <---------ZAT14         <---------ARR14(3)           --------->ANAC46                              <-------TEIL         --------->ARR14(2)           --------->ANAC58                              --------->ZAT14 <         --------->AGP1            --------->ZAT14                                 <-----------HVH21<        <---------CCA1(2)          --------->ZAT18        <---------MYB52(1)     --------->LBD16   --       ----------->ARR10           <---------ZAT14       <-------GAMYB          <---------TOE1(2)<---  ---------->DOF2          --------->LBD16      <---------HSFB2a(2)             --------->LBD16  <--- --------->ANAC46        <---------LBD16       <---------TOE1(1)               <---------LBD16   ---- ---DEAR3(2) <---------At4g35610   <---------REM1(2)    <---------MYB46(3)     --------->LBD16  <---- ---MYB46(3)<-----------RAV1(1)<------ZmHOX2a(1)--------->HSFB2a(2)        <---------ALFIN1    <-----   tccaagaagcagatctgctgctattaaaccggaggagtacacggccagtccgagaagtccgttggatttgaacttcccctccccggttcactcgaagcgg  28150100                                                                                      <---------LBD16           <---------ANAC46                                                     <---------MYB52(1)         <---------MYB46(3)                                                   <---------MYB46(3)        <---------AtMYB61                                                     --------->MYB52(2)     <-----------RAV1(1)                                                <---------LBD16--------->LBD16  <---------ARR14(2)                                                    ------>ZmHOX2a(2)        <---  --------->ARR14(2)                                           --------->ANAC46<-------GAMYB     ---- ------MYB83                              <------ZmHOX2a(1)    ------->GAMYB<---------MYB52(1) <----- ------MYB46(1)                           =====================================HOX2a_HOX2a     ====== ------->MYB59                    <---------ANAC46            <---------LBD16<-------TEIL     <------ ------MYB52(1)  <---------MYB52(1)<-------GAMYB--------->ANAC58       --------->ARR14(1)    -------- ------ARR14(2)<---------MYB46(3) <---------ANAC58          <-----------GT1<---------MYB52(1)-------- ----->ARR14(2)<---------DEAR3(2) <---------ANAC58    ------->GAMYB   --------->ARR14(2)    <-------- -----SPL7 --------->ALFIN1   <---------At4g35610  --------->MYB52(1) <---------ARR14(2)--------->LBD16 ----MYB46(3)<------NtERF2<-----------RAV1(1)   --------->ANAC58    ----------->ARR10<---------LBD16   ttcggttctggtggtgtcggtttgggtattgttgctgcgttggaggaaactagcaacgggattaaccggcatgatccggttcgttactccgggagattca  28150200  Previous    Next  AGI:  At1g74940.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G19200.1); similar to unknown [Populus trichocarpa] (GB:ABK92901.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 28149720    to: 28151039    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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