Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC46     --------->ANAC58     --------->ANAC55(1)     --------->ANAC58                                   ------->GAMYB  <-------TEIL                                         --------->ANAC58 --------->CCA1(2)                                     --------->ANAC58 -------->ARR14(2)                                   --------->MYB52(1) ---------ARR14(2)                               <-----------ARR10 ->ATHB12                                    --------->YAB1                                     <---- --ICU4             ------>MYB46(1)       <---------GLK1(1)                        <-----------GT1 -ATHB12            ------>MYB83          --------->GLK1(1)                    <---------ARR11(3) -YAB1            <---------MYB59--------->ANAC58--------->GLK1(2)        <---------ATHB12     <----- >ICU4         <-----------GT1   --------->ANAC58<---------ARR11(3)     --------->WOX13(1)     <-----   cggatacacgaaactaataaccaaacaagagagaaacgcattggatatcaaaatctaacggaattagatttgatcaatcgagatttcacagtcatttgct  28142000                                                                      ------>MYB46(1)                                                                    <---------MYB46(2)                                                                    <---------MYB111(1)                                                                    <---------MYB111(2)                                                                    --------->MYB46(3)                                                                    ----------->HVH21                                                                    --------->DREB2C(2)                                                                    ------->GAMYB                                                                    --------->DEAR3(1)                                                                 --------->AtMYB61                                                                --------->MYB46(3)                                                              <---------PCF5                                                             <------MYB46(1)                                                             <------MYB83                                                           <--------P ------>MYB83  --------->RAP2.6(2)                                                          <-------GAMYB   --------->ICU4                                                         --------->MYB55(2)<---------ICU4                               --------->ANAC58          <---------MYB46(3)--------->YAB1          --------->YAB1       --------->ANAC58         <---------AtMYB61 <---------YAB1  <---------DAG2      <------ZmHOX2a(1)       --------->DAG2          --------------------->WRI1   --------->MYB46(3)    ------------------------>ANAC81              <---------MYB52(1) <---------MYB55(2)    <----------DOF2   <------ZmHOX2a(1)   ----------->GT1           <---------ARR14(2) --------->DEAR4(1)--------->MYB46(3) ------DOF2          ---------->DOF2           <---------MYB46(3)<---------ALFIN1--------->ANAC46---- ----ANAC58      ---------->DOF2     --------->YAB1   <----------DOF2--------->ORA47(1)<---------ALFIN1 ----ANAC58  ---------->DOF2 ---------->DOF2------------>MYB.PH3(1)--------->DEAR3(2)------>NtERF2   tttgaggaggaatcagaaagaaagaaagaaaaaaagcaaacatatttagcggttacctttggttggaccaccgaccatgatcacagccaccactttctcc  28142100                                      ------->GAMYB                                     --------->MYB46(3)                                   <-----------GT1                              <----------DOF2                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                            <---------RVE1(1)                           --------->ARR14(2)                           <---------ARR14(2)                           <---------ARR11(3)                           <---------AGP1                    <---------HSFB2a(1)                           --------->ARR11(3)                --------->HSFC1(2)           <---------ZAT14     --------->ZAT2        --------->AGP1                    <---------HSFC1(2)           --------->At4g35610     --------->At4g35610  <---------CCA1(2)  --------->ANAC46--------->HSFB2a(1)          <---------At4g35610     <---------At4g35610 ----------->ARR10 ----------->RAV1(1)            --------->HSFB2a(2)    <--- -->ZmHOX2a(1)    ---------->DOF2 <-----------GT1    ----------->HVH21    <---------HSFB2a(2)    ----   tccattgagctccccatgttcaaagctcagatctttttaacagacccacaaaactttgacagaaatttcccaacttgcagaaaaatggggacagcagtat  28142200                                               --------->GLK1(2)                                               <---------ARR14(2)                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                   --------->GLK1(1)                                   <---------GLK1(1)                                  <---------ARR11(3)                                  --------->ARR14(3)                                  <-----------ARR10                                   ------>ZmHOX2a(2)                                  --------->ARR14(2)                                 <------ZmHOX2a(2)                                  <---------AGP1   ----------->GT1                   --------->CCA1(2)                       <----------DOF2  ------>ZmHOX2a(1)                           <-----------ARR10               <---------ARR14(2) <---------ARR14(2)                                <---------AGP1 --               --------->ARR14(2) --------->ARR11(3)                                <---------ARR14(2)              <------ZmHOX2a(1)   <---------ARR14(3)                                --------->AGP1<--          ---------->DOF2       ----------->ARR10 ----------->GT1 ----------->GT1   --------->ARR14(2) --------GT1  ============================HOX2a_HOX2a            --------->DAG2     --------->ARR11(3) ----->YAB1   =============================HOX2a_HOX2a         ---------->DOF2      <---------ARR11(3)   cacaattcagacaaaaggatttgagctttgaaggaagatctcctctgagaaactggaaaaacaaaaaaaggtgaagtttttgagaagatctaatcgaaac  28142300                         --------->CCA1(2)              <---------MYB46(3)                        --------->PCF5             <---------TOE2(3)                          --------->PCF2                           <---         <-------GAMYB   <------ZmHOX2a(2)      ----------->HVH21      --------->ANAC46          ----        --------->MYB111(1)                     --------->ALFIN1     <---------ALFIN1          <-----        <---------MYB46(3)       --------->At4g35610  <---------ANAC58 --------->ANAC58        <-----        --------->MYB52(2)------>ZmHOX2a(2)   --------->LBD16   --------->ANAC46           <---------      <--------P        --------->ARR11(3)   <---------ANAC46   --------->ANAC58    --------->ZAT14  <-----------RAV1(2)   <---------ARR11(3)  <---------LBD16     --------->bZIP60(2)<---------ALFIN1 --------->HVH21        --------->AGP1  <-----------RAV1(1)     --------->ANAC58  --------->ANAC46 -- ---------HVH21<-------GAMYB    --------->GLK1(2)     <---------ANAC58 --------->ANAC58    ------>ZmHOX2a(1)   tgtgacaggttagttgtggttatcgagatctaagaagctgtattgttgcggtgatggggtccctccaagtcacactcaccattcaccacagtcctttaag  28142400                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              <------                                        <---------ANAC58                                      -------                                        <-------GAMYB                                         <------                                        <---------ANAC58                                      -------                                       <---------MYB46(3)                                     <------                                       <------MYB83                                           -------                                       <------MYB46(1)                                       <------- ---ZmHOX2a(1)                     <---------ARR14(2)                                 --------->ARR11(3) ----->YAB1                  *TSS  <---------GLK1(2)                                  --------->ARR14(2) ----TOE2(3)               <----------DOF2                   <---------AHL20(2)       <---------ARR11(3) ----TOE1(3)         <-----------GT1  <---------AtMYB61      --------->AHL20(2)       <---------ARR14(2) -DOF2   <---------ARR11(3)<---------DAG2       <---------ATHB12           --------->AHL20(2)<------- -------->DOF2     <----------DOF2 --------->ARR14(2) <-----------GT1----------->GT1 <---------CCA1(2)   gataagcgcgagacctctcgtctttacctctttttcagatttggttgccaaacattttactatttaaaaaatggaaaaaaaatccacaaatcttcagatc  28142500     ----------->GT1 --------->AHL20(2) ->ZmHOX2a(2) --->GLK1(1)             ----------->GT1                      --------->O2 -ZmHOX2a(2)          --------->YAB1                          --------->TGA1a ---AGP1             <---------ATHB51                         <---------TGA1a -->ARR14(2)         --------->ICU4                    <---------ANAC58              <---------ANAC46 ---ARR14(2)         <---------YAB1        --------->ATHB12   <---------O2           <---------ANAC58 -->AGP1           --------->WOX13(1)     --------->ICU4      ========================bZIP_DOF ---ARR11(3)     ------------>CBF         <---------YAB1<---------WOX13(1)           <---------ANAC58 -->ARR11(3)    --------->ANAC46    --------->DAG2     <---------ANAC58    <----------DOF2     <----- --CCA1(2)      --------->ANAC58   =====================================bZIP_DOF  ----------->HVH21-- --At4g35610    --------->ANAC58   ---------->DOF2    --------->ATHB12  <-----------GT1      --------   tcataaaatgtttatttcaagcaattatagtaaaaaaaaaagttatgatttggaattgattgccatgtgagttttaactttgatgtgacttgaaggtgac  28142600                                                                                 <---------ICU4                                                                                 --------->YAB1                                                                                --------->ICU4                                                                                <---------YAB1                                                                              <--------HAHB4                                                                              <--------ATHB1                                                                              <---------ICU4                                                                              --------->ATHB51                                                                              --------->YAB1                                                                             <---------ATHB51                                                                             --------->AHL20(2)                                                                             <---------ATHB12                                                                         --------->MYB46(3)                                   ----------------->AGL3               --------->ANAC58                            ----------->RAV1(1)                         --------->ANAC58       <-------TEIL    --------->At4g35610                            --------->MYB46(3) ------------------TaNAC69(2)      <-----------------AGL3        <---------HSFB2a(2)    ---------->DOF2 ------->AHL20(2)      <---------At4g35610                       --------->HSFB2a(2)  --------->At4g35610 --->HVH21            <-----------RAV1(1)     ------>NtERF2  <----------DOF2 --------->ICU4     <----   ataaaatggttcatgttcttgatactgctgcaccagagcctaaaatggtgcctcaatactggcctttatagaacaaccaataattatcagcaaagcatct  28142700        <---------YAB1                                              <----------ID1                  <      --------->YAB1                                             ---------->DOF2                    <     <---------YAB1                          ------>MYB83    --------->YAB1                        --   <---------ICU4                            ------>MYB46(1)<---------YAB1   --------->CCA1(2)     <-   --------->YAB1           ---------->DOF2<---------MYB59--------->YAB1    --------->ARR11(1) <----- ------DOF2             <-----------GT1 <------ZmHOX2a(1)----------->GT1    <---------ARR11(3) <-----   tttattcattataaattcaacaggttttacaaaagagtttcaggaccgaactagacagactgataataaaagcacaaagatttgaacagacagcatttgg  28142800                                                          --------->LBD16                                                         <-----------RAV1(2)                                                         <---------LBD16                                                        <---------LBD16                                                     ------>MYB83 ------MYB83              --------->YAB1             ------>MYB46(1)      --------->REM1(2)     ----- ------MYB46(1)           <---------ICU4           --------->AtMYB61      --------->ZAT14       ----- ------->MYB59 --------->YAB1                   <-----------GT1           <---------ZAT14       ----- --------AtMYB61         --------->ICU4      --------------->AtSPL8      --------->ALFIN1     ------- -MYB83       ----------->HVH21            --------->ARR14(2)          <---------ANAC46  <---------ANAC58 -MYB46(1)  <---------AtLEC2               <---------ARR14(2)   ------>ZmHOX2a(2)        <---------ANAC58   tttggtttccatttccatgacaatgtattcattacttagttgggagatttgtaccatccccagggatcgtttgaagtgtagagagtcacttgcttcacac  28142900  Previous    Next  AGI:  At1g74910.1    Description:  ADP-glucose pyrophosphorylase family protein. similar to ADP-glucose pyrophosphorylase family protein [Arabidopsis thaliana] (TAIR:AT2G04650.1); similar to putative GDP-mannose pyrophosphorylase [Linum usitatissimum] (GB:ABF48494.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64404.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14878.1); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 28139022    to: 28142429    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g74920.1    Description:  ALDH10A8 (Aldehyde dehydrogenase 10A8); 3-chloroallyl aldehyde dehydrogenase. Identical to Betaine aldehyde dehydrogenase 1, chloroplast precursor (ALDH10A8) [Arabidopsis Thaliana] (GB:Q9S795;GB:Q56ZQ8); similar to ALDH10A9 (Aldehyde dehydrogenase 10A9), 3-chloroallyl aldehyde dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G48170.1); similar to betaine-aldehyde dehydrogenase [Chorispora bungeana] (GB:AAV67891.2); similar to putative aminoaldehyde dehydrogenase [Pisum sativum] (GB:CAC48393.1); similar to betaine-aldehyde dehydrogenase [Gossypium hirsutum] (GB:AAR23816.2); contains InterPro domain Aldehyde/histidinol dehydrogenase; (InterPro:IP Range:  from: 28142670    to: 28146405    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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