Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ICU4                                                                  <---------AHL20(2)                                                                  <---------ATHB51                                                      <---------TOE2(3)                                                      <---------TOE1(3)                                                     <---------DOF5.7(2)                   ----------->GT1                 --------->DOF5.7(2)   --------->DAG2                  <---------------AtSPL8          --------->At5g28300 --------->AHL20(2)                  --------------->AtSPL3         <---------MYB46(3)<---------ICU4                  --------------->AtSPL8     --------->DAG2       --------->AHL20(2)     <---------ANAC46      --------->YAB1                        ---------->DOF2   --------->AHL20(2)   --------->DAG2    <---------WOX13(1)                <---------ARR14(2)    <---------ANAC55(2)   ---------->DOF2   - -----TOE1(3)   --------->MYB52(1)    --------->ARR14(2)    ----------->GT1  ----------->GT1    ----- -----TOE2(3) ---------->DOF2     <---------At4g35610--------->MYB52(1) ---------->DOF2--------->MYB52(1) >AtLEC2    --------->TOE2(3)  ---------->DOF2------------>MYB.PH3(1) <---------AHL20(2)>>>>>>>>>MYB98   ggtttgattaataacataaaacggtacaaaaatttaagcagatagagaaagcggttaacgatatgtaaataattaaaagtggtataaagtaacggataga  28137200                 --------->GLK1(2)                 --------->ARR11(3)          ----------->HVH21                                                   ------>MYB46(1)         --------->At5g28300                                                  ------>MYB83        <---------ANAC46                                          --------->ANAC46        ----------->GT1                                           --------->ANAC58       <---------DEAR3(1)                                         --------->ANAC58      --------->SPL7                                            --------->ARR14(1)      <---------ZAT14                                  --------->YAB1         -------->P           --      --------->ZAT14            <---------AtMYB61 --------->AHL20(2)        ------>ZmHOX2a(1)     --      --------->ABI4(2)        <----------DOF2  <---------ICU4  --------->CCA1(2)                <---      <---------ABI4(1)  <-----------GT1     --------->YAB1    <---------ARR14(2)             -------     --------->ALFIN1   <---------AHL20(2)  <---------YAB1     <---------GLK1(2)              <------ -------->MYB52(1)  <----------DOF2     <---------AHL20(2)     --------->ARR14(2)            <------- ----->DOF2      <---------ARR11(3)   <---------YAB1--------->WOX13(1)--------->ZAT14      --------->WOX13(1)   aagaacggtgcggtgaaagtatctttttaatcgctttggtattattttcataatcaattacaacggatacgctatactcctaccgcaatgcatcaattat  28137300                                                            --------->ARR14(2)                                                            <---------ARR14(2)    <---------ARR11(3)                           <------MYB46(1) ------->MYB46(3)                                <------MYB83                               <-------- ---------->CBF                             <----------DOF2 --------->GLK1(2)               <-------- --------GT1                              <---------At4g35610                               <-------- -->YAB1                      ------------>CBF<---------MYB52(1)                          --------->ARR11(3) ---ICU4                   <--------P     --------->At4g35610              <----------DOF2<---------ARR11(3) --ATHB51        ---------->DOF2--------->WOX13(1) --------------------->WRI1        ------------>CBF   aaccaatatgttttagatggaaaggcctggttagcaatcgactctgctgtttggtttgtgagaatcgtcgaactcttctttgaactccacaatgtcttgt  28137400                                                 ------------>CBF                                               <---------ZAT14                                        ------->GAMYB                                       --------->MYB46(3)                           --------->At5g28300                                       <---------MYB46(2)                          ----------->GT1                                       <---------MYB111(1)                      --------->MYB52(1)                                       <------------MYB.PH3(2)                  ------------>MYB.PH3(1)                                       <---------MYB52(2)                  <---------HSFB2a(2)                                       <---------MYB111(2)            <---------HSFB2a(1) -ANAC58                              ------>MYB46(1)                 --------->HSFB2a(1)   --------- -ANAC46                        ---------->DOF2--------->ZAT14 ---------->DOF2---------->DOF2 -ANAC58          ------------>CBF    ------>MYB83         ---------->DOF2 --------->HSFB2a(2)-------   gagaccatttccaaagaatgcccaattagacccataaaccaactaactctgtacaatctgaaaaagaaagaaacgttccataaaacggttaaaacattat  28137500                                 <-----------GT1                                       <---------ATHB12                              ------>MYB83                    <-----------GT1         ------>MYB83   --------->At5g28300        ------>MYB46(1)             <----------DOF2             ------>MYB46(1) >TOE2(3)                  --------->ANAC46         ---------->DOF2                ------------>CBF -->AHL20(2)             --------->REM1(1)     <---------ANAC55(2)         --------->AHL20(2)       <   ttagcggtaaacaaatgtgatacaactacaccaaattacccaagaagtcacttaaaaagacttttttcaaaacaaaataaaacaaaccaatcgatgaaac  28137600                                                                   --------->RAP2.6(2)                                                                   --------->DREB2C(2)                                                                   --------->ANAC46                                                                   --------->RAP2.3(3)                                                                   --------->RAP2.3(2)                                                                   --------->RRTF1(2)                                                                   <---------ATERF1(2)                                                                   --------->DEAR3(1)                                                                  --------->ORA47(2)                                                                  --------->RRTF1(1)                                                                  --------->ATERF1(1)                                                                  --------->RAP2.6(1)                                                                  --------->RAP2.3(1)                                                                  --------->ERF1                                                                 ------>NtERF2                                                             --------->GLK1(2)                                                             --------->ARR14(2)                                                             <---------ARR14(2)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                            <---------GLK1(2)                                                           <----------TaMYB80                                                           <---------At4g35610                                                           --------->At4g35610                                                           --------->HSFB2a(1)                                                        <------NtERF2                                                       --------->LBD16                                                       ------>NtERF2                                                      --------->DREB2C(2)                                   ------>NtERF2      <---------DEAR3(1)                                 <------NtERF2        --------->RAP2.3(2)                                 --------->ATERF1(1)  --------->DEAR3(1)                                --------->LBD16       --------->ATERF1(2)                               --------->DEAR3(1)     --------->RAP2.3(3)                              --------->ATERF1(1)     <---------ATERF1(2)                              <---------LBD16        --------->ATERF1(1)                              --------->RAP2.3(1)    --------->ERF1--------->RRTF1(3)                              <------NtERF2          <---------LBD16                             <------NtERF2           --------->RAP2.3(1)                             ------>NtERF2          ------>NtERF2<---------RAP2.3(1)                             <---------ATERF1(1)    --------->ABI4(1)                            --------->RAP2.3(2)     <---------ATERF1(1)                            --------->ATERF1(2)    <---------ALFIN1--------->ATERF1(2)                            <---------ATERF1(2)    --------->DEAR3(1)<------NtERF2                            <---------DEAR3(1)     ------->GAMYB --------->LBD16                            --------->DEAR3(1)    --------->MYB46(3)------>NtERF2                           --------->ATERF1(1)  --------->AtMYB61<---------ATERF1(1)                           --------->SPL7       <---------ALFIN1--------->ANAC46   <---------ARR14(2)                           --------->RAP2.3(1) <---------MYB55(2)<---------At4g35610                          ------>NtERF2  --------->TOE2(3) <---------HSFB2a(1)     --------->ARR14(2)                          <---------At4g35610  --------->MYB46(3)--------->At4g35610   ------>ZmHOX2a(1) ----------DOF2     ------->TEIL<---------ATERF1(1)--------->DREB2C(2)        <---------TOE1(3)   gtctttttagcaaatcgctatgtacttcggccgccggagccaatctcaaaccaccgccggcagattccgccgccatagctaagcttatcctctcttctcc  28137700                                                                                                 ----                                                                                              <------                                                                                             --------                                                                                           --------->ARR14(2)                                                                         --------->ZAT14--------->HSFB2a(2)                                                                  <---------ZAT18       <---------HSFB2a(2)                                             ------->GAMYB     <---------ANAC46        <---------LBD16                                           -------->P      <---------ARR14(2)   --------->ANAC58-----                  <------ZmHOX2a(2) --------->AtMYB61     <---------CCA1(2)     --------->ANAC58-----      ------->GAMYB           --------->ANAC46      ------->TEIL  --------->ZAT14    --------->GLK1(2)     <---------MYB52(2)   <-----------GT1--------->MYB46(3)--------->ARR14(2)   --------->ANAC46-----   gaacacaactcaccaagacgatcaatttctactctccaccaaaacaaccccatggaccccaaatctcgtgaactctgttctcaagcgactctggaaccac  28137800                                               --------->ARR14(2)                                               --------->GLK1(2)                                           --------->LBD16                   --------->ANAC58                                          --------->DEAR3(1)         =============HOX2a_HOX2a       --------->ARR11(3)               --------->ABI4(1)         ------>ZmHOX2a(1)       <---------ARR11(3)              <---------ALFIN1     <---------HSFC1(2)   ---------->DOF2                     --------->AtMYB61    --------->HSFC1(2)                <------NtERF2 ----->DEAR3(1)                        --------->DEAR3(1)   --------->HSFB2a(1)             --------- ---ALFIN1                          --------->YAB1          <---------HSFB2a(1)             --------- ->MYB46(3)                        --------->MYB46(3)   --------->ANAC46     --------->ANAC58------>NtERF2 ---->ANAC58                     --------->WOX13(1)     ----------->HVH21  ------>ZmHOX2a(2)<-------- ---->ANAC46                ------>ZmHOX2a(1)  <---------ARR14(2) ================HOX2a_HOX2a<------- ---->ANAC58         <---------ALFIN1 --------->MYB46(3)--------->O2 ------>ZmHOX2a(1)     <---------RAP2.6(2)   ggccctaaagctctccaattcttccacttcctcgacaatcaccaccgcgaatatgtccacgacgcttcctccttcgatctcgcaatcgacattgccgccc  28137900                                                                                                 ----                                                                                                 ----                  <---------MYB52(1)                                                     ------>NtERF2                 <-----------HVH21                                                      --------->DEAR3(1)                --------->DEAR3(1)                                                     <------NtERF2<              ------>NtERF2                                                           ------>NtERF2 -          --------->ANAC58                                                           --------->DEAR3(1)          --------->ANAC58                                                           <---------DEAR3(1)        <---------ALFIN1                                                           <-----------HVH21-        --------->AtMYB61             --------->ARR14(2)                          --------->YAB1 <---     --------->AtMYB61<-----------HVH21            --------->LBD16          --------->ANAC58    <---- >DEAR3(1)--------->ANAC46            <---------ARR14(2)                    --------->ANAC58  <------ >ATERF1(2)<---------ALFIN1<---------ATHB12      <---------LBD16         --------->TOE1(3)  --------- -ATERF1(2)--------->AtMYB61        <---------SPL7--------->ANAC46      <---------HSFB2a(1) <-------- --RAP2.6(3) <---------ALFIN1    <---------At5g28300         ------>ZmHOX2a(1)   <---------ATHB12----   gtcttcacctccaccccaccgtctggtcactcattcaccgtatgcgctctctccgcatcggtccttctcccaaaaccttcgcaatcgtcgccgagaggta  28138000    --------->At4g35610    <---------At4g35610  --------->MYB46(3) ----->ANAC58 ----->ANAC55(2) ---------ARR14(2) -------->ARR14(2)        <---------MYB52(1) ------>TEIL            ----------->GT1                   <---------MYB46(3)                      --- ------ANAC55(2)        <---------MYB46(3)               <--------P                         <-------- ---TEIL   --------->ANAC58   <---------At4g35610  ------->TEIL                          --------->GLK1(2) ---SPL7   --------->ANAC58---------->DOF2      --------->ANAC58              <----------DOF2     <-- ------>AtSPL3       ------------>MYB.PH3(1)    --------->ANAC58         <---------At4g35610--------- -------AtSPL3      --------->DAG2       <---------ARR14(2)         --------->ARR11(3)  <---------GLK1(2) ----->ANAC58      ---------->DOF2       --------->ARR14(2)         <---------ARR11(3)<---------YAB1   cgcatccgctgggaagcccgataaagcggttaagctgtttctgaatatgcacgaacatggttgttttcaagatttagcttctttcaatacgattctcgat  28138100  Previous    Next  AGI:  At1g74900.1    Description:  OTP43 (ORGANELLE TRANSCRIPT PROCESSING DEFECT 43). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G77360.1); similar to Os02g0679200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047736.1); similar to hypothetical protein OsI_008305 [Oryza sativa (indica cultivar-group)] (GB:EAY87072.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 28137594    to: 28139328    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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