Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ----------->GT1                    ============================HOX2a_HOX2a     <---------ANAC58                    ------>ZmHOX2a(1)                  --------->TOE2(3)               --------->YAB1                          --------->TOE1(2)          <---------AHL20(2)                           --------->TOE1(3)          --------->AHL20(2)                   ----------->GT1  <---------ANAC46       --------->YAB1  ---------->DOF2   ------>ZmHOX2a(2)      <---------ANAC58 --------->YAB1      --------->AHL20(2) <---------TOE2(3)<---------ALFIN1   <---------GLK1(1) ----------->RAV1(1)   ataaacaaataataaaatcatcctctaaaggttaaacttttgatccacattgtgaaaccttagatttcttgggagccaaaccagcataagaacacttcaa  28136000                                                                               <-------TEIL                                                                              <------ZmHOX2a(2)                                                                              >>>>>>>>>>>>>>>>>LFY                                                               --------->TOE1(3)                                                               --------->TOE2(3)                                      --------->GLK1(2)     <-----------GT1  --------->ARR14(2)                       --------->HSFB2a(2)               <---------ARR11(3)  --------->ARR11(3)             <--------P<---------HSFB2a(2)               --------->ARR11(3)  <---------ARR14(2)            <-------GAMYB            <---------GLK1(2) ------->TEIL          <---------ARR11(3)     -   gtttcaacgtctagggttgattttgctagaaaacagagagattctaagaaatgaatgaatatataccttaagaccagaagatccattgtctccatctaaa  28136100                                                            ------>MYB83                                                            ------>MYB46(1)                                                        ------>MYB83                                                        ------>MYB46(1)            <---------ZAT18                   ---------->DOF2       --------->ZAT14                   <---------------AGL15       <---------ZAT14                   --------------->AGL15                                      -  <---------ARR14(2)                    ----------------->AGL3                            ------>MYB83  --------->ARR11(3)                    <-----------------AGL3                            ------>MYB46(1)  <---------ARR11(3)                <-----------TGA1   --------->ANAC46                --------------  <---------GLK1(2)             ------->GAMYB<---------AHL20(2)                  --------->YAB1    --  --------->ARR14(2)           --------->MYB46(3)     --------->MYB46(3)  --------->MYB52(1)  ------- ---------->ARR10     <---------ALFIN1  =============================================================   ccaagatactgcagagccctagtcccactctcaacagtcgtcactatataaagaaacccaccaaatttatccaaaaaaacgaatcagaaaccaaacaaaa  28136200                                                     <------ZmHOX2a(2)                                                    --------->AGP1                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                   --------->GLK1(1)                                             --------->ANAC58                         --------->ANAC58                                       <----------DOF2------>ZmHOX2a(2)               --------->ANAC46                                      <---------------AGL15                           --------->ANAC58             ---------->DOF2          --------->TOE2(3)   --------->ANAC58           --------->LBD16          <---------ANAC55(2)         --------------->AGL15                       <------ZmHOX2a(2) ------------------------>ANAC81      --------->TOE1(3)   --------->ANAC58       --------->ARR14(2) -------->DAG2                     <-----------GT1 <---------GLK1(1)             <---------ARR14(2) ---------->ANAC81              <----------DOF2   ----------->ARR10          <-----------GT1 -------->DOF2                 <---------DAG2--------->ANAC58              <---------DAG2          -- --->DOF2 ----------->GT1   <-----------GT1  --------->ANAC46              <----------DOF2     ------ =====================================================MADS_MADS         <---------ARR11(3)    <------   gaaaagcagaaaacgtaaagagaaacagttttgccttttacctttacaagcagagatcttaagcaatctctcaataactttacgatccacgaaactatca  28136300            --------->ANAC55(1)                                                            ----------      --------->ANAC58                                                                    <----------ID1      --------->ANAC58                                                              ----------->GT1  ------->GAMYB------->TEIL >>>>>>>>>TBF1                                         ---------->DOF2 --------->ANAC46    --------->LBD16                                           --------->HSFB2a(2) ------->MYB52(1)  <---------LBD16     ---------->DOF2                         <---------HSFB2a(2) --->YAB1   --------->ANAC55(2)      --------->ARR11(3)                       <---------LBD16       - ---YAB1    <---------ANAC55(2)>>>>>>>>>TBF1   ----------->GT1               <---------LBD16    -----   tcaacggcaagaacatgtaactccggtgaagaagaagaagataaagaagaagataaatctctgagagccattgttttctctcgggaaagtaaacaacaaa  28136400                                   --------->ANAC58                                   --------->ANAC58                             ---------->DOF2                          --------->TOE2(3)                          <-----------HVH21                         --------->ANAC58                <---------TOE2(3) <---------------------WRI1           --------->TOE2(3)<---------WRKY12                             --------->TOE2(3)         <-----------------------TaNAC69(2)<---------ATHB12             <---------ANAC55(2) ->RAV1(1)----------->GT1--------->ANAC58  ------------>CBF            <-------TEIL -------->At4g35610     ------->TEIL     --------->GLK1(1)         ----------->GT1 ---->MYB52(1)  <---------TOE1(3)<------ZmHOX2a(1)                <------ZmHOX2a(1)   acagatgaagaaacgtttaaagtttgaacgtcaaaggacgcagaaatcaatgtgaagaaggaagacgaggagttacataaataagagagagagagagaga  28136500                                                                                            <------ZmHOX2a(2)                                                                                           <---------AGP1                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                          <---------ARR14(1)                                                                                          <---------CCA1(2)                                                                                        ------>ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                            ===================================HOX2a_HOX2a                     <---------ANAC55(2)                    <------ZmHOX2a(1)        <------ZmHOX2a(1)                    <-------TEIL   ---------->DOF2        <---------TOE1(3)          ==============HOX2a_HOX2a                   --------->CCA1(2)     ---------->DOF2  <---------TOE2(3)  --------->ARR14(2)           <---------MYB46(3)     <------ZmHOX2a(1)   --------->CCA1(2)      --------->GLK1(2)         --------->At5g28300<---------AHL20(2)        <----------DOF2        <---------ARR14(2)   <--   --------->At4g35610     --------->AHL20(2)     <------ZmHOX2a(1)         <---------GLK1(2)------>ZmHOX2a(2)   <---------At4g35610     <---------AHL20(2)  <------ZmHOX2a(1)    --------->ANAC46 ===============HOX2a_HOX2a   gaggcagaagcggtgagtgagatacataaataaataggaaagagaaagaggaggagatttaaggaaatacacagaagagaatctggaggatcggatcttg  28136600                                 --------->ETT(1)                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                                              --------->ANAC46                    --------->AGP1                                                  --------->ANAC55(2)                    --------->ARR14(2)                                              <---------ANAC55(2)                    <---------ARR14(2)                                              --------->ANAC58                    <---------AGP1                   <----------CDC5                --------->ANAC55(1)                    --------->ARR11(3)          --------->DAG2          <---------ANAC58                    <---------ARR14(3)        ---------->DOF2           <---------ANAC58                    --------->ARR14(3)    <-----------ARR10  <---------bZIP60(2)    --------->ANAC58                    <---------ARR11(3)    --------->GLK1(2)  <---------ANAC46       ----------->GT1 ---------RAV1(1) ----------->ARR10      <---------GLK1(2) <---------ZAT14 <-----------HVH21       <-   atgttgttgttgttgttgttaagatcttgtgagggtcggaagagaatctaaaggcgatgagtgatgtgtttatgtcttgtcagaaaacgtaatattgtgt  28136700             <----------DOF2          --------->GLK1(2)                                  <----------DOF2          <---------ARR11(3)     <----------DOF2 <----------DOF2        --------->ICU4  <---------MYB59          ------>ZmHOX2a(1)       ----------->HVH21         <-      --------->YAB1   --------->ANAC58       <------ZmHOX2a(2)  <----------DOF2               <----- --------REM1(2)       --------->ANAC58  <-----------GT1 <---------At4g35610               ------>ZmHOX2a(1)   cttcacggtcataatctttttagggacccaattttctttgattttacgatccttttgtctgctctttctttctatctgacaatgactactctcctctctt  28136800                                                                                      --------->ZAT6                                                                                      <-----------GT1                                                                               <---------AHL20(2)      <---------ANAC46                                                        <---------AHL20(2)      <---------ANAC58                                                        --------->AHL20(2)      <---------ANAC58              <---------AHL20(2)                        <---------AHL20(1)   <----------DOF2 <---------AHL20(2)     <----------DOF2                     --------->AHL20(1) <--- ----------GT1  <---------ICU4     --------->AHL20(2)            <----------DOF2    <-----------GT1 -----DOF2   ----------->GT1       <---------AHL20(2)   <----------DOF2  --------->AHL20(2)     <----   tttatctttcgtattcagtaattacatgtactgtctattaatttctttcacttggtttcttttcattctttcacataaaataaaattttcactacattta  28136900  Previous    Next  AGI:  At1g74890.1    Description:  ARR15 (RESPONSE REGULATOR 15); transcription regulator. Identical to Two-component response regulator ARR15 (ARR15) [Arabidopsis Thaliana] (GB:Q7G8V2); similar to ARR7 (RESPONSE REGULATOR 7), transcription regulator/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT1G19050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64409.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006) Range:  from: 28135251    to: 28136371    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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