Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->At5g28300          <---------------AtSPL3                                          --------->At4g35610          <---------------AtSPL8                           <---------ARR11(3)               <--------          <---------ICU4                                   --------->ARR11(3)      --------->TOE1(2)    <---------At4g35610    --------->MYB46(3)     <---------HSFB2a(2)     --------->ZAT2    --------- ------>GLK1(1) ----------->GT1            ---------->DOF2 <---------GLK1(2)  ----------------->AGL1 --ZmHOX2a(1)   <---------ZAT6 <---------REM1(1)  --------->HSFB2a(2)     <---------At4g35610   atgtccaactgataagtactgtaatttcaacaaatgtagcaaaacaaaagtttcagaaacagatttttgaagaagcagcttcaaaactgggaaagatttc  28134300                                       --------->ANAC58                      <-------TEIL     --------->ANAC58                  --------------->AtSPL8                  <---------------AtSPL3                  --------------->AtSPL3                                      --------->ANAC46                  <---------TOE2(3)    --------->ANAC46   <---------ZAT14    --------------->AGL15    >>>>>>>>>EIN3 <---------------AtSPL8          ---------->ID1            ----------------->AGL2 -ARR11(3)        <---------TOE1(3)  --------->ANAC46     --------->ZAT14  ----------->RAV1(1) >ARR11(3)    <-------GAMYB  <----------DOF2--------->ATHB12             --------->MYB46(3)         -   gactatacattgatgctgttgaggtacttctctttttccacacgaacgatttggcccttcttcactgttttctcatccaccagaaacagaaattcaaaag  28134400             <---------MYB52(1)        <---------ARR11(3)                                                <---------LBD16       <----        --------->GLK1(2)                                              <---------ANAC58         <----        --------->ARR11(3)                                             <---------ANAC46         <----   --------->YAB1                         --------->ALFIN1             <---------ANAC58        <-----  <---------YAB1                       --------->DAG2              <---------MYB52(1)         <------ -------->YAB1                        ---------->DOF2        <---------ZAT14       <----------DOF2  <   aattatcaaaaatctgttattggattcaacacttagaaacaaaagtgagggaacagactcgagtaaaccggtttcttggggagggttttaggggttttgg  28134500    <---------MYB46(3)  <---------At4g35610  <---------ZAT2                                                       --------->At5g28300  --------->ZAT2                     --------->ZAT18              --------->WRKY45  --------->At4g35610                --------->ZAT14              --------->WRKY38(1) -----ANAC58                       --------->ZAT14                ----------->HVH21 ---GAMYB <---------YAB1 <---------ANAC58        <----------DOF2  --------->WRKY12 -----ANAC58<---------ANAC58       <---------ZAT18         <---------At4g35610          <------ZmHOX2a(2) ----MYB46(3)            <---------ANAC58 <------------------------ANAC81        <------ZmHOX2a(1) ---AtMYB61 <---------ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR164C  <----------DOF2  ==============HOX2a_HOX2a -----------RAV1(2)<-----------HVH21 <---------ZAT14    <---------At4g35610    <---------TOE2(3)   ttgcagctggtgatgcttccccatcagacttgccctgtgtgctctgtttctctttctctgcttctgctttgactgtgaattgaggaagagatcgatgagg  28134600                                                  <---------At4g35610                              --                     --------->ICU4   ---------->DOF2                                              --           --------->ARR11(3)     <-------GAMYB   --------->At4g35610                              <-     <---------HSFB2a(2)         ----------->GT1  <---------ZAT2        --------->ANAC58          ---     <---------HSFC1(1)          <---------MYB46(3)          <-----------HVH21              ---------     --------->HSFB2a(2)        <---------AtMYB61 --------->ZAT2        --------->ANAC58    ---------     --------->HSFC1(1)     <------ZmHOX2a(1)  ---------->DOF2        ---------->DOF2  --------->AtMYB61   gagtcttctagaagaaattggtaatgaagaggagatggttgaaagagaagaaagctgagacacagtcgcagagaaagccattggagagaccaccaagaaa  28134700                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----     <---------ANAC55(1)                                                             --------->YAB1     <---------ANAC46                                                               <---------ATHB12     <---------ANAC55(2)        --------->ANAC58                                   ------>MYB83  ----     --------->ANAC55(2)        --------->ANAC58                                   ------>MYB46(1) ------->AHL20(1)               --------->RAP2.6(2)                               --------->WOX13(1) ------->AHL20(2)     <---------HSFB2a(2)                                       ------------>CBF ---- --------AHL20(2)     --------->HSFB2a(2)                                       --------->MYB46(3) >> ------>AHL20(2)     <---------LBD16                     ============================================ >ANAC58             <---------ANAC46 *TSS               ------->GAMYB       --------->ZAT14     <--- >ANAC58            <---------LBD16   --------->YAB1  --------->MYB52(1)<---------ZAT14   --------->At4g35610   aaaaattatgtgttcttggagtttcgggataagaccgcaatggtatccaagtctctcaacggtctaaaacagacatcactgaaccaatcataagatgcca  28134800 ------ANAC55(2) ------TGA1a ----->ANAC55(2) ----->bZIP60(2) ----->ANAC58 ----->O2                                                                    <---------MYB52(1) ----->ANAC58                                                         <---------AHL20(2) ----->TGA1a                                                          <---------AHL20(1) ----->ANAC46                                                         --------->AHL20(1)         <--- ----->ANAC55(1)                                                 --------->ICU4                  <--- >>>>>>>NAP                       <------ZmHOX2a(1)            ---------->DOF2                   <--- ======MYC_MYB    <---------At4g35610                       ----------->RAV1(1)                <----- ------O2         ------>ZmHOX2a(1)             --------->ARR11(3)   --------->AHL20(2)      <-------   cgtaagtgcaaacaagtttcctctgctatacaactaggaatatagtaatagataatgtattccaacaaagattatattcgtttttttttgttttctgatg  28134900                                                                                           <---------AHL20(2)                                                                                   <----------DOF2                                                                                 ------->TEIL                                                                             --------------->AtSPL8                                                                            <---------ANAC55(2)                                                                            --------->ANAC55(2)                                                                            <---------ANAC46                                                                            <---------ANAC58 ---------->DOF2                                        <------ZmHOX2a(2)   <---------ANAC58 ------ANAC58                                          --------->ARR11(3)   <---------ANAC55(1)   <-- ------ANAC58                                  <---------O2        --------->ARR11(3)  --------->AHL20(2) ------ANAC46                               ----------->HVH21      <---------ARR11(3)  <---------AHL20(2) ----YAB1<---------YAB1                    <-----------HVH21       --------->GLK1(2)  --------->AHL20(2) --At4g35610  --------->YAB1             ------->TEIL  <---------ARR11(3) <-----------GT1  --------->AHL20(2)   cttgaaagtttatgaattataaacacatacaagtgaaatcgtgtatgtcacatggaagatcatatacaaaatctttttacgtgtacttttaaattatatg  28135000                    ------>ZmHOX2a(2)                     ---------->DOF2       ----------->GT1                    ======================HOX2a_HOX2a  --------->ANAC58     <---------AHL20(2)                  --------->ARR11(3)                   --------->ANAC58    --------->AHL20(2)                  <---------AGP1            --------->AHL20(2)         <---------AHL20(2)            <---------YAB1                 --------->AHL20(1)         --------->AHL20(2)         --------->GLK1(2)                 <---------AHL20(1)     --------->AHL20(2)<---------AHL20(2)        <---------GLK1(2)                  <---------ARR11(3)     <---------AHL20(2)--------->AHL20(2) ---------GT1  <---------WOX13(1)  <------ZmHOX2a(1)--------->ZAT14   <---------AHL20(2) --------->YAB1   ttacattatagaatctaattgatctggttgtgaagtaggaaacaatatatatactgtaggcaaagtatttaattttataaaattgtttaaatcatattca  28135100                 <-----------GT1        <----------DOF2    ------>ZmHOX2a(2)                     --------->DAG2                                      -------   <---------GLK1(1)                      <---------TOE2(3)                            --------->AHL20(1)  --------->ARR11(3)               ----------->GT1      --------->GLK1(2)             --------->YAB1  <---------ARR11(3)          --------->MYB52(1)       <---------GLK1(2)   <---------ANAC46----------   cattgatctccttttgttttaacaaaaaaaaaaaacagagtaataaggtgagcattagaatctagacttacatagttgcatatatcaaaaataatgtata  28135200  Previous    Next  AGI:  At1g74880.1    Description:  NDH-O (NAD(P)H:PLASTOQUINONE DEHYDROGENASE COMPLEX SUBUNIT O). similar to unnamed protein product [Vitis vinifera] (GB:CAO46413.1) Range:  from: 28133519    to: 28134738    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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