Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                --------->TOE2(3)                                                           <--------                --------->YAB1                                                              =========              --------->ARR11(3)                             --------->ETT(2)               ---------              <---------ARR11(3)                        <---------At4g35610                 ---------             <---------GLK1(1)                          --------->At4g35610                -------->P             --------->GLK1(1)                        <-----------GT1                 <---------CCA1(2)     --------->ATHB12                            <----------DOF2              <----------DOF2<-------   <---------ARR11(3)                        <---------GLK1(2)       <---------AHL20(2)------->TEIL<- --->HSFC1(2)<---------CCA1(2)          --------->At4g35610  <---------ETT(2) --------------------->WRI1   ttcaaaatcatttggatatcttaattttggtttaatcccatgagctagcttcttttttagctgtctaccattttttttttctttgaatgtatctaccaaa  28126600                                                            --------->STY1(2)                                                            <---------STY1(2) -----ARR14(2)                                      --------->YAB1 ---->ARR14(2)                                   <---------ICU4 >MYB46(1)                                       --------->YAB1 >MYB83                                          --------->ATHB12 ------->AGL15                                   <------------ATHB5 --MYB59                                         <--------ATHB1 -------->AG                                     <--------HAHB4 ---------AG                                     --------->ATHB51 ---------AGL3                                  <---------ATHB12 ---------AGL2                                  --------->ICU4 -------->AGL1     <---------ANAC46             --------->AHL20(2)                             ------ ---------AGL1     XXXXXXXXXXXXXXXXXXXX>MIR869.2<---------ATHB51                               ------ =============================================================MADS_MADS                        ------ -------->AGL3     <---------ANAC55(2)        <---------------AGL15                     ---------->DOF2 -------->AGL2     --------->ANAC55(2)        --------------->AGL15       <----------DOF2   --------- --------AGL15   <-----------------AGL1       ======================================================= --------------AtSPL8                       --------->AHL20(2)  --------->REM1(1) <---------ANAC46   tatggaacattatatcatgtctcgtattggaatagttgatacaaaattcaataattagaactagctacaatatagtcttttgtttggggtaaaagctacg  28126700                                    ---------->DOF2                                  --------->AHL20(2)                                  <---------AHL20(2)      --------->ZAT18         --------->ICU4      <---------ZAT18    ----------->GT1               XXXXXXXXXXXXXXXXXXXX>MIR4243       ---------->DOF2 --->ANAC58             <---------TOE2(3)<---------ZAT14                              --------->ANAC58 --->ANAC58       <---------------AGL15  --------->ZAT18                              --------->ANAC58 --->ANAC46       --------------->AGL15  --------->ZAT14  ----------->GT1      ----------->GT1 >TOE1(2)        <-----------------AGL1 >>>>>>>>>>>>>>>>>LFY     <---------AHL20(2)  --------->DAG2 =================================MADS_MADS<---------ANAC46      --------->AHL20(2) ---------->DOF2   aaatctagtggtctaattgtctaaatgaggtaaaaattaaaagtccagtgtattttgaaattgtaaatttatcaccgaaaaatgtaaaaagcaaaagaga  28126800                                                                               <-----------RAV1(1)                                                                               <---------ANAC58                                                                               <---------REM1(1)                                                                               --------->ALFIN1                                                                               <---------ANAC46                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                          --------->ALFIN1                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------bZIP60(2)                                                                        --------->O2                                                                        <---------O2                                                                        <---------TGA1a                                                                        --------->TGA1a                                                                        <---------ANAC55(1)                                                                        ======================MYC_MYB                                                                        --------->ANAC55(2)                                                                        <---------ANAC46                                                                        <---------ANAC55(2)                                                                     ----------->TGA1                                                                     ----------->HVH21                                                                   --------->O2<---------ANAC58                                                                   <---------bZIP60(2)                                                                   <---------O2<---------bZIP60(2)                                                                   <---------bZIP60(1)                                                                   <---------TGA1a                                                                   --------->ANAC55(2)                                                                   <---------ANAC55(2)                                                                   <---------ANAC58                                                                   ===========================MYC_MYB                                                                   <---------ANAC55(1)                                                                   <---------ANAC46                                                                   --------->bZIP60(1)                                                                   --------->TGA1a              <---------ANAC46       ------>NtERF2                 <---------ANAC58            --------->MYB52(1)      --------->DEAR3(1)           <---------TGA2(2)    <-------GAMYB           ----------->TGA1        --------->MYB46(3)           ----------->TGA1    <---------ANAC58           ----------->HVH21       --------->DEAR3(2)           ----------->HVH21   <---------ANAC46     ---------->DOF2              --------->SPL7              <---------At4g35610   <---------ANAC58  <----------ID1                <---------SPL7                <---------ZAT2<---------AtMYB61  <---------YAB1              <---------------AtSPL3          --------->At4g35610--------->ALFIN1  <---------ANAC55(2)--------->MYB52(1)  <---------MYB52(1)   --------->ZAT2--------->ALFIN1   gattacgaaaagagtgacggagataacgggaaaccgtaccgccgtttgcagtctgaaatgctgaagctgacgtgacgtgtggtgtggcgtttgagaaata  28126900                                                 ------->GAMYB                <----------ID1                         <----------DOF2        --------->MYB46(3)          ------------------------>ANAC81                      --------->ARR11(3)      --------->MYB52(1)           ------------------------>ANAC81                      <---------ARR11(3)     ------>ZmHOX2a(1) --------->ANAC58 *TSS                -              --------->At5g28300  <----------DOF2             --------->ANAC58----------------------             ----------->GT1 <-----------GT1<---------MYB59<----------DOF2---------->DOF2        <---   acatcgagtttttaggggtaaataggtctttatacttctttctgttcctaacagacagacgcttcaaggaaacacaaaaagaaacaaaaaaaaaaaaaaa  28127000         <---------DAG2         <----------DOF2            ------>NtERF2     <-----------GT1             --------->HSFB2a(2) <----------DOF2          <---------ANAC46                                                         <- -------->TOE2(3)         <---------ANAC58   ----------->GT1        --------->ZAT14             <---- -->ANAC81                <---------ANAC58  --------->ETT(1)  <----------DOF2        <----------DOF2 --------GT1   <----------DOF2   <---------HSFB2a(2)   --------->MYB46(3)   <----------DOF2     -----   aacctttttagctttttctttcttcttggcgagttcgcgaccttggtcggaaaatcaacaatcgcttctctgcaatcgcattatcggctctaatggcaga  28127100                 ---------->DOF2                                  <---------GLK1(2)                --      <-------TEIL                                                <---------ARR14(2)               --  --------------->AtSPL3                       <-------TEIL       --------->ARR14(2)   <---------MYB52(1) ----------RAV1(2)                     ----------->HVH21      <---------LBD16        <---------ANAC58 -----ARR14(2)--------->TOE2(3)      ------>ZmHOX2a(1) <-----------GT1               <---------ANAC58 ---->ARR14(2)--------->TOE1(3)   ------>ZmHOX2a(1) <---------AHL20(2)       <---------MYB52(1)    <-   cccagaggtacaattaccttaaaccccctcaatctcctcctctcacgagttcatttttttcgatttcggatttttcttcgtttagtttcgttctgtttct  28127200                                   <---------ANAC46                                                 <                              <-----------RAV1(1)                                                   <                          <---------ARR11(3)                                                       <-                          <---------ARR14(2)                                               <---------           <-----------------AGL1 <---------At4g35610                                      <---------DAG2  <---------ARR11(3)      --------->GLK1(2)                                               <---------ANAC58  --------->ARR11(3)      --------->ARR14(2)                                              <---------ANAC58 ------->HSFB2a(2)        --------->ARR11(3)                         <-----------GT1  <---------ANAC58 ------->HSFC1(1)        <---------GLK1(2)             --------->AHL20(2)             <---------ANAC58 --------HSFB2a(2) ----------->HVH21                   <---------AHL20(2)   --------->ALFIN1    <----   tctagaccttgtttctcttatcggacagaatcttgttgctgatttcgctaattttgtttaaattttgggtttcacgatgtgggttttgtcttgcttttct  28127300                                                          <-------GAMYB                                                         <---------ANAC46                                                         <---------DEAR3(1)                                                        <------NtERF2                                                       <---------RAP2.3(1)       --------->ANAC58                                                      <---------RAP2.6(2)        --------->ANAC58                                                     --------->At4g35610      --------->ARR14(2) ---------LBD16                                      <---------At4g35610      <---------ARR14(2) ---------ANAC46                                   ---------->CDC5        ------>NtERF2 --------LBD16                                   --------->TOE1(3)       --------->ANAC46 -DOF2      <---------YAB1                       --------->TOE2(3)      --------->SPL7  --------->ZAT14 ------DOF2 --------->ICU4<---------MYB52(1)   <---------ARR11(3)      <---------ATERF1(1)   --------   tttcggggtttgcgatgattttttgttcgttttgttttgggttaacacagaccttagcggcgttgaagagagcctacgccgatacgatactgaacacgac  28127400                     <---------MYB46(3)                 ----------->HVH21              <-------MYC4              <-------PIF5              ------->MYC4              ------->PIF5              ------->PIF4              ------->MYC2              <-------MYC3              <-------MYC2              ------->MYC3              <-------PIF4             <---------ANAC55(2)             --------->ANAC55(2)             <---------ANAC46             ======================================MYC_MYB             --------->O2             <---------TGA1a             --------->TGA1a             <---------O2            ------------>OsbHLH66           <---------ALFIN1           <------------OsbHLH66          --------->ATERF1(1)          <------NtERF2         <---------DEAR3(2)         <---------DEAR4(2)         <---------ATERF1(1)         ------>NtERF2         <-----------HVH21        <---------RAP2.3(2)        <---------DEAR3(1)        --------->ATERF1(2)        <---------RAP2.3(3)        <---------ATERF1(2)       <------NtERF2<---------AtMYB61       --------->At4g35610       --------->ATERF1(1)       --------->RAP2.3(1)                        --------->ANAC46                               ----      <---------ATERF1(1)                   <------MYB46(1)        <-------GAMYB               <-----      <---------DEAR4(2)                    <------MYB83          <---------MYB46(3)          <------      <---------RAP2.3(1)                  <---------TOE2(2)     <---------ANAC46            <-------     <---------RAP2.3(2)                   <---------TOE1(2)   ------------>AtMYB77          --------     <---------DEAR3(1)                   <--------P          ----------->HVH21              <------MYB46(1)    --------->ATERF1(1)                 <------NtERF2   --------->ARR11(3)                   --------    <---------At4g35610                 <---------ANAC46<---------ARR11(3)                   <------MYB83    --------->At4g35610                ------>NtERF2  --------->ANAC58                      <-------- ->ANAC46<---------RAP2.3(1)          <---------ANAC46--------->ANAC58      ---------->DOF2<---------MYB52(1)   gaaggaagcggcggcacgtgtgatggtttctgagaagaaggcgcgtaggtatcagcaagaacttgtgacggttagaaatgaagcacttcatacgttggtt  28127500  Previous    Next  AGI:  At1g74860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19010.1); similar to hypothetical protein LES1_20t00016 [Lycopersicon esculentum] (GB:AAX95765.2) Range:  from: 28126980    to: 28129543    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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