Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------ARR14(2)                                             --------->ARR14(2)                                            <-------GAMYB                                            <---------SPL7                                           --------->MYB55(2)                                           <---------DEAR3(2)                                           <---------MYB46(3)                                          <---------DEAR3(1)                                         <------NtERF2                                        ------>NtERF2                                        <---------ERF1                        ========================================bZIP_DOF                        =============================MYC_MYB                        <---------TGA1a <---------RAP2.3(1)       ------>ZmHOX2a(2)--------->TGA1a ------------>AtMYB77     <---------ARR11(3) ============================MYC_MYB     --------->ARR11(3)------->TEIL     <---------RRTF1(1)                      ---------->DOF2   --------->ICU4    <---------SPL7    <---------RAP2.3(2)                  --------->ANAC58   <---------YAB1--------->ANAC46      <---------DEAR3(1)                   --------->ANAC58 -->DAG2    <---------bZIP60(1)        <---------RAP2.3(3)        <---------WOX13(1) -->DOF2    --------->bZIP60(1)<---------ALFIN1      <----------DOF2--------->ATHB12   ttgacatgatcgtgacttcacgacggacgtcttccacatcgacggcggttcggagctttctcttggagattgatttgcaagctaaagcttcacgagtctc  28085900                          <---------ARR14(2)               <---------ANAC58                                         ------>ZmHOX2a(2)           -               <---------ANAC58  ------>NtERF2                          ===========================HOX2a_HOX2a               <---------ANAC46  --------->LBD16                       --------->At4g35610          -               <---------ANAC55(2)  ------>NtERF2                     <---------ARR14(2)            -               <---------ANAC55(1) ------>NtERF2                  <---------At4g35610               <               --------->ANAC55(2)----------->HVH21            <-----------HVH21                    -              <-------TEIL--------->ARR14(2)                  <-----------RAV1(1)                   -             --------->CCA1(2)   <------NtERF2              <---------ANAC58    --------->ATHB12    -            --------->ARR14(2)  --------->ANAC46            <---------ANAC58  <---------WOX13(1)    <            <---------ARR14(2)  --------->DEAR3(1)         ------->TEIL<---------At4g35610          <            --------->ARR11(1) <---------LBD16     ============================HOX2a_HOX2a          -          ----------->ARR10   <---------At5g28300  ------>ZmHOX2a(1)  --------->ARR14(2)    <------ZmHOX2a(1)   tctatctgtacaaagatacgtgattccgaattcgccgcgaccgagttctcgtcctaagatgtacttgtcgctgatctgagattgatggctcataggaatc  28086000          <---------ANAC46          <---------ANAC58                                   ------->PIF5          <---------ANAC58                                   <-------PIF5         <---------MYB46(3)                                  --------->LBD16         <-------TEIL                                      <------NtERF2        --------->ALFIN1                                   <---------LBD16   --------->MYB52(1)                                   --------->ATERF1(1)  ----------->HVH21                                    <---------SPL7 -------->O2                                           <---------ATERF1(1) -------->TGA1a                                        ------>NtERF2 -------->ANAC55(1)                              <-------GAMYB--------->ALFIN1 ---------O2                                    --------->MYB52(2) -------->ANAC58                      <---------SPL7   <---------RAP2.6(3)          <------MYB46(1) -------->ANAC55(2)               ------>ZmHOX2a(2)   <---------ANAC58              <------MYB83 -------->ANAC46                --------->ARR14(2)    <---------ANAC58             <---------AtMYB61 ---------TGA1a                 <---------ARR14(2)    --------->DEAR3(1) <<<<<<<<<TBF1 ---------ANAC55(2)       --------->MYB52(1)    <---------ANAC58       <-----------------AGL2 -------->ANAC58        --------->MYB46(3)      <---------ANAC58 <---------AtMYB61 --------->MYB59   acacgtaacggtgcgtgagttcttaaaccatcgggatcgtcgtatgggtttcgttgccgtccccgtggaggtttcttcttctggtttggttttgagttgt  28086100                                                                --------->YAB1                                                                <---------ICU4                  <----                --------->ANAC58                               --------->ICU4                   <----                --------->ANAC58                             --------->YAB1                    <-----              <-----------RAV1(2)                        --------->At4g35610                   <-----            --------->ANAC46                          --------->At4g35610                      <-----         ----------->HVH21                            <---------At4g35610        ---------->DOF2<----  --------->WRKY18(1)                                 --------->ZAT2        ----------->GT1   <------ <--------ZAP1--------->ATERF1(1)                     <---------ZAT2   ---------->DOF2       <-------GAMYB   ctgggtcaaacttgacgcaggcgatacaattacccatggctgagtttttgaaactcagcagaagaataatgaagaaagtagtttaaagaagttttcgttg  28086200                  <------NtERF2                <---------ANAC46               <------NtERF2           <---------ATERF1(1)          --------->DEAR3(1)          <---------DEAR3(1)          ----------->HVH21         --------->ATERF1(1)                                          --------->ZAT2        <---------ATERF1(1)                                           <---------At4g35610      <---------LBD16                                                 --------->At4g35610    --------->ARR14(2)                    --------->At4g35610         ----------->RAV1(2)    <---------ARR14(2)                   --------->MYB52(2)           <---------ZAT2    --------->GLK1(2)                 <---------MYB52(1)            <-----------RAV1(2) --MYB83--------->LBD16      ------>NtERF2<-------GAMYB            <-------TEIL -----MYB46(3)------>NtERF2  --------->LBD16                  <---------ANAC55(2) ----DEAR3(1)--------->DEAR3(1)       <-----------HVH21       --------->ANAC55(2) ----TOE1(2) <---------DEAR3(1)  <---------ARR14(2)      --------->ARR14(2)                  <------- ----AtMYB61--------->ATERF1(1) <---------SPL7           <---------ARR14(2)                  -------- --MYB46(1)------>NtERF2    <---------LBD16             <------ZmHOX2a(1)                <----------DOF2 ---MYB52(1)<------NtERF2  <---------LBD16<---------At4g35610<---------LBD16            <---------DAG2   gtgcaaaatccggcgacggcgtagagttttccggcgaaccggtgagttgcagagaagaggaaacacgggttcagctgaagaaagtttcgaccttttcgta  28086300                     <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(2)                <---------YAB1               <---------AHL20(2)              --------->YAB1              --------->AHL20(2)             <---------YAB1             ----------->GT1           <---------ICU4     --------->AHL20(2)           --------->YAB1     <---------AHL20(2)                                                -----     *TSS  -------->HAHB4   <-----------TBP                      ------>ZmHOX2a(2)          <--------     --------->YAB1 <---------AHL20(2)---------->DOF2          <---------ARR11(3)           --------- --ANAC46 <---------YAB1  <---------AHL20(2)         --------->DAG2                         --------- --->GT1  --------->ICU4 <---------AHL20(2)         ---------->DOF2                        --------->AHL20(2)   aaattgatcaaaatgattataattttttttatttatatcaaaaagaaaataagttaaagcgacttgatctatctcccctatatacttaaacaaattaatt  28086400                                                                                            ---------                                                                                            <--------                                                                                           <---------YAB1                                                                                <---------AHL20(2)                                                         <---------AHL20(1)     --------->AHL20(2)                                                         <---------ARR11(3)     --------->AHL20(1)                                                       --------->AHL20(1)       <---------AHL20(1)                                                       <---------AHL20(1)   --------->AHL20(2)        --------->At5g28300                            <---------AHL20(2)----------->GT1   --------->ICU4       ----------->GT1                           ----------->GT1      <-----------GT1    --------->YAB1 ---->AHL20(2)                               <---------AHL20(2)       --------->MYB52(1) <--------HAHB4 -AHL20(2)                                   --------->AHL20(2)     <---------WOX13(1)  <---------YAB1 >AHL20(1)                            --------->AHL20(2) --------->AHL20(1) <---------AHL20(2) <----- >AHL20(2)  --------->ICU4            <---------AHL20(2) --------->ARR11(3)<---------MYB52(1) <------   acatagaaactgtaattttgagccattttctaacctataatttataaaaaattgtaaaatattttcagtgattaacagttaattaattgtattattatta  28086500                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)                                                                            --------->AGP1                                                                            <---------AGP1                                               --------->YAB1               <---------ARR11(3)                                             --------->AHL20(2)             --------->ARR11(3)                                            --------->AHL20(2)         --------->TOE2(3)                                            <---------AHL20(2)         --------->TOE1(3)                                            --------->YAB1       --------->YAB1                                        <---------AHL20(2)   --------->AHL20(2)                                      --------->ANAC55(2)    <---------AHL20(2)           -----------                                      --------->ANAC58       --------->AHL20(1)        <------MYB46(1)                                      <---------ANAC55(2)   --------->AHL20(2)         <------MYB83                                  ----------->GT1        <---------AHL20(2) <---------ARR14(2) >YAB1                        ---------->DOF2<---------AHL20(2) <---------YAB1     --------->ATHB12 -ICU4                <---------REM1(1) --------->AHL20(2)  <---------AHL20(2)------>ZmHOX2a(2) ------GT1            ----------->GT1 ----------->GT1    --------->AHL20(2)<---------CCA1(2) ---YAB1        <-----------RAV1(1)   --------->ANAC58  --------->AHL20(2)----------->ARR10--------->At5g28300   cagaacaagttttagtctctggtgttgtaactaaaagagtaagtaattaaaataactattaaaaaaattatagccttagatctgttgataggtggtaaaa  28086600                                                                                              -------                                                                                              <------                                                                                              <------MYB83                                                                                              <------MYB46(1)                                                                                             <-------                                                                                            <--------                   <---------ANAC58                                                       <---------ANAC46                   <---------ANAC55(1)                                                    --------->O2                   <---------bZIP60(2)                                                    <---------bZIP60(2)                   <---------ANAC58                                                       <---------ANAC58                   <---------ANAC55(2)                                                    <---------ANAC58                   <---------O2                                      ----------->HVH21    <---------O2                   <---------ANAC46                            --------->ARR14(2)         <---------TGA1a               <---------ANAC58                                <---------ARR14(2)      ----------->HVH21               <---------ANAC58                  <---------WRKY18(1)--------->At5g28300----------->TGA1              <---------At4g35610               --------->WRKY38(1)----------->GT1   --------->ALFIN1              --------->At4g35610               --------->WRKY12--------->ARR14(1)--------->DAG2             ------->TEIL                       --------->ETT(2)--------->CCA1(2)===================bZIP_DOF >GT1     <---------REM1(1)                  <---------MYB46(3)--------->ARR11(1)---------->DOF2   tgaagggtagagatgtagcttacgtggaaggggagagtttgatgaagttgttgaccgtagaagtggatacggtgacattgtcaaaaagtgtgacgttggt  28086700                                                     --------->ATHB51                                                    <---------YAB1                                                  --------->YAB1                                                  --------->ATHB51                                                  -------->ATHB1                                                  -------->HAHB4                                                  <---------AHL20(2)         <------MYB83  --------->ARR11(3)         <---------ICU4         <------MYB46(1)                          <--------HAHB4                                    -        --------->MYB59<---------AHL20(1)        <---------YAB1                                     - -->MYB52(2)           --------->AHL20(1)        <---------ATHB51                            -------- ---MYB46(3)         <---------AHL20(1)          --------->ICU4                              -------- --TOE2(2)           --------->AHL20(1)        --------->YAB1              <---------AHL20(2)<------- -MYB52(1)           <---------ARR11(3)     ----------->GT1       ---------->ID1            <--------   ttcatttgatttggtatcaccaaaatattttgttttgttttcaattcagtaattattattgtcttcttgtcttatattatatgtctatagcattacctaa  28086800  Previous    Next  AGI:  At1g74740.1    Description:  CPK30 (calcium-dependent protein kinase 30); calmodulin-dependent protein kinase/ kinase/ protein kinase. Identical to Calcium-dependent protein kinase 30 (CPK30) [Arabidopsis Thaliana] (GB:Q9SSF8;GB:Q9SBZ3); similar to ATCDPK1, calmodulin-dependent protein kinase/ kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G18890.1); similar to CPK13 (calcium-dependent protein kinase 13), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G51850.1); similar to CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12480.1); similar to unnamed protein produc Range:  from: 28083607    to: 28086305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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