Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-----------GT1                                  <---------ICU4                               <---------AHL20(2)                       ---------->DOF2                              <---------AHL20(2)                       --------->AHL20(2)                              --------->AHL20(1)                       <---------AHL20(2)                              --------->AHL20(2)                ----------->GT1<---------ZAT6       -                              <---------AHL20(1)               ----------->GT1 ----------->GT1    --- -------YAB1                 --------->AHL20(2)           ---------->DOF2<---------TOE2(3) --------->WOX13(1)   atttttgtcaaacatttttagtttaactaaaattaatttttacagaaaaattcagaactcgaaagagggaaaattaaagaagagttaagagagcaatcta  28068500                                   --------->AHL20(2)                               <---------ICU4                              <---------ATHB51                              <---------YAB1                      <---------AHL20(2)                   --------->TOE2(3)<---------YAB1                  --------->YAB1   <---------AHL20(2)                              <---------ICU4                  --------->ATHB12--------->YAB1                                  --------->ICU4                  <---------ICU4  --------->AHL20(2)                         --------->bZIP60(1)         --------->At4g35610  --------->ICU4       ----------->GT1           <---------TGA2(1)       --------->DAG2--------->AHL20(2)           ----------->GT1            <---------bZIP60(1)      ---------->DOF2<---------AHL20(2)         --------->DAG2          <------MYB46(1)            -- ---------->GT1  <---------ATHB12 <---------AHL20(2)                    <------MYB83          <------ ------->DOF2    --------->ICU4<--------HAHB4  ---------->DOF2         --------->MYB59        <------   taaagaaaaaaagctgaaaatcattaaatgcgataattaaaatagaagaaaaagggtaatttagtctaaaaatttggttatgtcatcagtagtctagatt  28068600                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(2)                  <---------CCA1(1)                  <---------RVE1(1)          --------->At5g28300          <---------ARR14(2)      ----------->RAV1(1)<---------WOX13(1)  <---------YAB1 ------->AHL20(2)<---------ARR11(3)    --------->ARR11(3)                                           < ---ARR11(3)     --------->ARR11(3)    <---------GLK1(2)                    <---------ZAT6------>NtERF2 ---GLK1(2) --------->MYB52(1)       ----------->ARR10<------NtERF2--------->HSFB2a(2)  --------->LBD16   ttaaaatacaacagtaacagatatttaattgaaattgctcagattttgttatagtcgtcgagattacttcgaaaacaagtgtaagaataccgcgacgttc  28068700                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(1)                                                                                 --------->ALFIN1                                                                                ------->PIF5                                                                                ------->MYC4                                                                                <-------PIF5                                                                                <-------MYC2                                                                                <-------MYC4                                                                                <-------PIF4                                                                                ------->MYC2                                                                                ------->PIF4                                                                                ------->MYC3                                                                                <-------MYC3                                                                                --------->TOE1(2)                                                                               <---------PIF3(3)                                                                               --------->O2                                                               <----------DOF2 <---------O2                                                     ====================================bZIP_DOF                                                     ---------->DOF2           --------->PIF3(3)                                                   --------->ANAC58            --------->TGA1a                                           <-------GAMYB       ==========================bZIP_DOF                          --------->YAB1   ==============================================MYC_MYB                         <<<<<<<<<ARR2    <---------ANAC46     <---------DAG2  <---------TGA1a<<<<<<<                         <---------ATHB12 <---------MYB46(3) ------>MYB83     ------------>OsbHLH66                         <<<<<<<<<ARR1 <-----------RAV1(1)   ------>MYB46(1)  <-------TEIL    <------            ----------->GT1        <---------ZAT14 --------->ANAC58         ---------------->PIF3(2) ---------ATHB12    <-----------GT1--------->ZAT14 --------->ANAC46  ----------->RAV1(1) --------->AHL20(2)   taatgaagcattcgaagtaaatttacaatcatacccttgcactgtcgttgaatacgaaagaccaacttttgcaccagaggcacgtgggaaatttattaac  28068800                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                         --------->AHL20(2)                                                                      -------->ATHB1                                                                      <---------ICU4                                                                     <---------YAB1                                                                     --------->ICU4                       --------->ZAT14                               <---------AHL20(2)                       <---------ZAT14                               --------->AHL20(2)                  <---------ZAT14                                    --------->AHL20(1)                  --------->ZAT14                                 <---------AHL20(2)       <---------YAB1              --------->ANAC46            <---------MYB52(1)      --------->AHL20(2)      --------->ARR11(3)          <---------ARR14(2)          <---------At5g28300        --------->AHL20(2)       <---------ARR11(3)          <---------PCF2              <-----------------AGL1  --------->TOE2(3)          --------->YAB1 <<GT-1 <---------MYB46(3)           <---------DOF5.7(2)    <---------ATHB12        --------->AHL20(2) -----GT1 --------->ARR14(2)       --------->DOF5.7(2)  ------------>CBF<---------YAB1  --------->ICU4   cagtgcctagtggttcccgctccagtgaagtagtctcgttaaccgttatgggcctaagcccaatccataaaattattaaaaaaaaaaaaaatgatcatgg  28068900             <------------CBF           <---------YAB1                                       <---------ZAT14       <---------ANAC58                                         --------->ZAT14       <---------ANAC58                                         --------->ZAT18             <------ZmHOX2a(1)   ---------->DOF2         *TSS                              ---------->DOF2 <---------------------WRI1   aagaaaaaagcttgtgattgtgagacatttcatcgaacacttggtgatcaatatttgaaaacgaagagcacagccaaaattcgataaaccctaaggaaca  28069000                                                                        <---------TGA1a                                                                        =============================                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                        --------->TGA1a                                                                   --------->ANAC58                                                                   ==================================                                                                   --------->ANAC58                                                                   --------->TGA1a                                                                   <---------TGA1a                                                                <---------PCF2                                                                --------->ZAT18                                                              <---------ZAT18                                                              <---------MYB46(3)                                                             <---------ANAC46                                                           <------MYB83 <---------O2                --------->ANAC58                          <---------AtMYB61                --------->ANAC58                          --------->MYB55(2)        <-----------GT1              ---------->DOF2  <---------TOE2(3)          <---------MYB46(3)   --------->YAB1      --           >>>>>>>>>TBF1       <---------TOE1(3)       --------->ATHB12 <---------ANAC58      <------ --------->At4g35610 --------->AtLEC2     <------ZmHOX2a(2)<------MYB46(1) <-------TEIL  <---------CCA1(2)   gtgagatggagaagaagaaagcaatgcaaattgaaggttacccgatcgagggattgtcgattggtgggcacgagacgtgcatcatatttccatctcttcg  28069100                               --------->LBD16                              --------->ANAC58                              --------->ANAC58                         --------->ANAC46                 ----------------------->TaNAC69(2)                 <-------GAMYB--------->ANAC46                 ==================MYC_MYB                --------->MYB52(2)                                                      <---------ARR11(3)       <<<<<<<<<<<<<<<<<LFY  <---------LBD16                                            --------->ARR14(2)      <---------ETT(2)   --------->TGA1a                                                <---------ARR14(2)   <----------DOF2       <---------O2                                                   --------->GLK1(2)   ================================bZIP_DOF                                             --------->ARR11(3)  <---------ANAC58       <---------ALFIN1                                           <---------TOE1(2)  <---------ANAC58 --------->WRKY38(1)                                           ----------->GT1 =============bZIP_DOF   --------->O2                   <---------At4g35610   <---------CCA1(2) =============bZIP_DOF <---------ALFIN1                 <---------CCA1(2)   --------->YAB1 ------->GLK1(1)<---------DEAR3(1)                ================================HOX2a_HOX2a  ------ ---LBD16       <---------MYB46(3)                ------>ZmHOX2a(1)        <------ZmHOX2a(2)  <------   gatagctttcgacattggtcgttgcccacatcgcgcaatttctcaagacttcctcttcatctctcactctcacatggatcatatcgtaagtatcttgaat  28069200                                            ------>ZmHOX2a(1)                                          ------>ZmHOX2a(2)                                          --------->HSFC1(2)                                          <---------HSFC1(2)                                         <------ZmHOX2a(2)                                        --------->ARR11(3)                                        --------->ARR14(2)      ---------->DOF2                   <---------ARR11(3)    --------->YAB1                      <---------ARR14(2) <---------------AGL15                  <---------GLK1(2)                           <----------DOF2 <---------HSFB2a(2)                  ----------->ARR10                         --------->ANAC58 --------->HSFB2a(2)       <---------AHL20(1)         <----------DOF2           --------->ANAC58 --------------->AGL15     <---------AHL20(2)         <---------DAG2        --------->YAB1 ->TEIL                    --------->AHL20(1)  <----------DOF2             <---------YAB1 ---CCA1(2)         <---------LBD16 ---------->DOF2<-----------GT1       --------->YAB1            --   cttctataaaaagacttgaaatttcggattatattttgcaaagatccttcttttgactttttgttttaagaacaattttgataagcctttgttgagactg  28069300               <---------ICU4                                                   --------->YAB1               <--------HAHB4                                                   <--------HAHB4               --------->YAB1                                                   --------->ATHB12               --------->ATHB12                                                <---------YAB1              <---------YAB1                                                <---------YAB1           <---------YAB1                                            ------->MYC3    ------->MYC3                          <---------YAB1             <-------MYC3--------->TOE2(3)    <-------MYC3--------->TOE2(3)  <---------At5g28300          ------>NtERF2--------->YAB1      <--- ---->NtERF2--------->YAB1       <---------MYB52(1)           --------->MYB46(3)<---------ICU4  <----   ccaccatgtgtttattatcattagcttattgctctgttactgttttgataaacccttgttgagagccaccatgtgtttattatcattagcatattgctct  28069400  Previous    Next  AGI:  At1g74700.1    Description:  NUZ. Identical to Nuclear ribonuclease Z (NUZ) [Arabidopsis Thaliana] (GB:Q8LGU7;GB:Q9CA48;GB:Q9SSF6); similar to CPZ [Arabidopsis thaliana] (TAIR:AT2G04530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62514.1); contains domain RIBONUCLEASE Z, CHLOROPLAST (PTHR12553:SF4); contains domain RIBONUCLEASE Z (PTHR12553); contains domain no description (G3DSA:3.60.15.10); contains domain Metallo-hydrolase/oxidoreductase (SSF56281) Range:  from: 28068927    to: 28070878    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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