Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------GLK1(1)                                                                       --------->HSFB2a(2)                                                                       <---------HSFB2a(2)                                                                      ------>ZmHOX2a(2)                                                                     --------->CCA1(2)                                                                    --------->AGP1                                                                    <---------ARR14(3)                                                                    --------->ARR14(3)                                                                    --------->ARR11(3)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                    <---------AGP1                                                                    <---------ARR11(3)                                                                 <---------------AGL15                                             <---------AHL20(2)  --------------->AGL15                                           --------->AHL20(2)   =====================================                                       ==========================================MADS_MADS                                       --------------->AGL15    <-----------------AGL1                                    <-----------GT1             <-----------------AGL2                                 --------->YAB1                 ----------------->AGL2                                 --------->ATHB12               <-----------------AGL3             <----------ID1      <--------ATHB1                 ----------------->AGL1           ------------------------>ANAC81 <---------AHL20(2)   ----------------->AG          ---------->DOF2        <---------ICU4                --------->MYB52(1)        --------->ANAC58        <---------ATHB12              <-----------GT1                    ----        --------->ANAC58        <---------YAB1        ----------->GT1<------ZmHOX2a(2)           ----    --------->GLK1(2)           --------->ICU4  <---------AHL20(2) <---------CCA1(2)   ---------->DOF2   tgtaagaatcaagaaagaacaaaaaaaaaaaacaatgattaccatataaatttatgaagtgaaattaccagatctggaactcagactgaaaaagaagaac  28067900                                                                                                   <-                                                                                                   --                                                                                                -----                                                                                              ------>ZmHOX2a(2)                                                                                              <------                                                                                              -------                                                                                             <------ZmHOX2a(2)                           ----------->GT1                                                  <--------                     ----------------->AG------->GAMYB     ----------->RAV1(1)              ---------            <---------ARR14(2)          --------->MYB46(3)--------->DEAR4(1)                <--------            --------->ARR14(2)          <---------MYB52(2)----------->HVH21                 --------- ======================================MADS_MADS          --------->DREB2C(2)              --------->GLK1(1) ----->TOE2(3)       ----------------->AGL1               --------->At1g77200              <---------GLK1(1) ----->TOE1(3)    <----------DOF2     ----------->RAV1(1) --------->DEAR3(1)       --------->MYB52(1)   cctaaatgactcaaaatccactttccaaaatgaaaaacaacaacaaacaaacaaaaaacaccgacagagtcaaacaacaaatcccaaacagagagatcct  28068000                                                                   ------>ZmHOX2a(2)                                                                  <---------GLK1(1)                                                                  <------ZmHOX2a(2)                                                                  --------->GLK1(1)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)         --------->ZAT6                                          <-----------ARR10       ------>MYB83                                              <---------ARR11(3)       ----------->RAV1(1)                                       --------->ARR11(3)       ------>MYB46(1)                                     ------->GAMYB      --------->ANAC46                                    --------->DEAR3(2)    --------->ANAC46                          <---------TOE1(3) <---------CCA1(2) --------HSFB2a(2)                            <---------TOE2(3)<---------DEAR3(2) ------->HSFB2a(2)                      <------MYB83      --------->MYB46(3) ->ZmHOX2a(1)                           <------MYB46(1)  <---------At5g28300 ---HSFC1(2)                            ----------->GT1 --------->ARR14(2) -->HSFC1(2)                            <---------DEAR3(2)<------------AtMYB77 -ARR11(3)                   --------->AHL20(2)         --------->MYB52(1)                         -- >ARR11(3)              <---------ARR11(3)   ---------->DOF2<-----------HVH21                      -- -ARR14(2)     <---------HSFB2a(2) --------->DAG2       <---------ARR14(2)                       ---- >ARR14(2)     --------->HSFB2a(2)---------->DOF2       <-----------GT1                          <---   tctaaaacccaacactactcgaacaatgtcttaaaataaagtcggtttaaagttggagtaaccgtcggatctccgttctaaatccaagtccgattcagac  28068100                                   <---------MYB52(1)                                  --------->At5g28300                                  --------->LBD16                                 --------->TOE2(3)                                 <---------ANAC46                                 ----------->GT1                               <---------At5g28300 ---->MYB83--------->YAB1 --------->AHL20(2)                                                    <---- ---->MYB46(1)        ----------->GT1                       --------->MYB52(2)  <---------CCA1(2)---- ----->AtMYB61       <------ZmHOX2a(1)                    <---------MYB52(1)  <---------ANAC58  <---- ------MYB59  ---------->DOF2 <-----------GT1           <---------ZAT6        <---------ANAC58  -----   caaacaaaaacaataacaaagaaggagataatataccgtaaattagaaatttagagttgtgttagttcaatgcttccatagcgtctctctctctcttcct  28068200                                          <---------MYB46(3)                          --------->AHL20(1)                                         <---------AtMYB61                       --------->AHL20(2) -                                       <---------MYB46(3)                  ----------->GT1        ---                                      <---------AtMYB61                  ----------->GT1     --------   <----------DOF2                    --------->ALFIN1              --------->ANAC58  <---------AHL20(1) -----LBD16                        <---------AtMYB61                --------->ANAC58  *TSS <---------LBD16 ----->TOE1(1)               ---------->ID1                       --------->MYB52(1) <---------AHL20(2) -----HSFB2a(2)             <-----------GT1                 ----------->HVH21    <---------AHL20(2) - ->ZmHOX2a(1)   ---------->DOF2  <----------DOF2      <----------DOF2  ---------->DOF2--------->ARR11(3)   cggagctttgatgctctctaaagaactgtttttctctttggtggtggtttcagagactttcagtgaccagacggaaagagaaaataaatattttgcgcaa  28068300                                                                                ------>ZmHOX2a(2)                                                                              <-----------ARR10                                                           <---------At4g35610<---------ARR14(2)                                                           <-------GAMYB      --------->ARR14(2)                                                       --------->ANAC58       <---------ARR11(3) -------->AHL20(2)    --------->DAG2              <---------ATHB12            --------->ARR11(3) ------>AHL20(2)     ---------->DOF2          ------------>CBF               <---------CCA1(2) ->LBD16    --------->YAB1         --------->GLK1(1)   --------->ANAC46   <---------MYB52(1) -------->YAB1 <-----------GT1     --------->At4g35610 --------->ANAC58 <---------MYB46(3)        <--   aataatatttctaattttaaccaaaaagtaagcgagcatctccataactccaatcttacgcagttgatttctagccgttggatcttctctgaaatttagt  28068400                                     <-----------GT1                                  <---------ICU4                               <---------AHL20(2)                       ---------->DOF2                              --------->AHL20(2)                       <---------AHL20(2)                              <---------AHL20(2)                       --------->AHL20(2)                              <---------AHL20(1)                ----------->GT1<---------ZAT6       -                              --------->AHL20(1)               ----------->GT1 ----------->GT1    --- -------YAB1                 --------->AHL20(2)           ---------->DOF2<---------TOE2(3) --------->WOX13(1)   atttttgtcaaacatttttagtttaactaaaattaatttttacagaaaaattcagaactcgaaagagggaaaattaaagaagagttaagagagcaatcta  28068500                                   <---------AHL20(2)                               <---------ICU4                              <---------ATHB51                              <---------YAB1                      <---------AHL20(2)                   --------->TOE2(3)<---------YAB1                  --------->YAB1   --------->AHL20(2)                              <---------ICU4                  --------->ATHB12--------->YAB1                                  --------->ICU4                  <---------ICU4  <---------AHL20(2)                         --------->bZIP60(1)         --------->At4g35610  --------->ICU4       ----------->GT1           <---------TGA2(1)       --------->DAG2<---------AHL20(2)           ----------->GT1            <---------bZIP60(1)      ---------->DOF2--------->AHL20(2)         --------->DAG2          <------MYB46(1)            -- ---------->GT1  <---------ATHB12 --------->AHL20(2)                    <------MYB83          <------ ------->DOF2    --------->ICU4<--------HAHB4  ---------->DOF2         --------->MYB59        <------   taaagaaaaaaagctgaaaatcattaaatgcgataattaaaatagaagaaaaagggtaatttagtctaaaaatttggttatgtcatcagtagtctagatt  28068600                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(2)                  <---------RVE1(1)                  <---------CCA1(1)          --------->At5g28300          <---------GLK1(2)      ----------->RAV1(1)<---------WOX13(1)  <---------YAB1 ------->AHL20(2)--------->ARR11(3)    <---------ARR14(2)                                           < ---ARR11(3)     <---------ARR11(3)    --------->ARR11(3)                   <---------ZAT6------>NtERF2 ---GLK1(2) --------->MYB52(1)       ----------->ARR10<------NtERF2--------->HSFB2a(2)  --------->LBD16   ttaaaatacaacagtaacagatatttaattgaaattgctcagattttgttatagtcgtcgagattacttcgaaaacaagtgtaagaataccgcgacgttc  28068700                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(1)                                                                                 --------->ALFIN1                                                                                ------->MYC3                                                                                <-------PIF5                                                                                ------->PIF5                                                                                <-------PIF4                                                                                ------->PIF4                                                                                ------->MYC2                                                                                <-------MYC2                                                                                --------->TOE1(2)                                                                                <-------MYC3                                                                                ------->MYC4                                                                                <-------MYC4                                                                               --------->PIF3(3)                                                                               <---------TGA1a                                                               ==========================bZIP_DOF                                                     ---------->DOF2           <---------PIF3(3)                                                     ====================================bZIP_DOF                                                   --------->ANAC58            --------->TGA1a                                           <-------GAMYB       <---------DAG2  <---------O2                          --------->YAB1   ==============================================MYC_MYB                         <<<<<<<<<ARR1    <---------MYB46(3)   <----------DOF2 --------->O2   <------                         <---------ATHB12 <---------ANAC46   ------>MYB46(1)  <-------TEIL    <<<<<<<                         <<<<<<<<<ARR2 <-----------RAV1(1)   ------>MYB83     ------------>OsbHLH66            ----------->GT1        <---------ZAT14 --------->ANAC46         ---------------->PIF3(2) ---------ATHB12    <-----------GT1--------->ZAT14 --------->ANAC58  ----------->RAV1(1) --------->AHL20(1)   taatgaagcattcgaagtaaatttacaatcatacccttgcactgtcgttgaatacgaaagaccaacttttgcaccagaggcacgtgggaaatttattaac  28068800  Previous    Next  AGI:  At1g74690.1    Description:  IQD31 (IQ-domain 31); calmodulin binding. similar to IQD30, calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G18840.2); similar to IQD30, calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G18840.1); similar to calmodulin binding protein IQ [Brassica rapa] (GB:BAF81526.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 28064820    to: 28068286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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