Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(2)     --------->ANAC58                 <---------AHL20(2)     --------->ANAC58                <---------WOX13(1) ------->GAMYB            ------->GAMYB<---------AHL20(2) -------->MYB46(3)     ----------->RAV1(1)                               <---------AHL20(2) ------>P     --------->ARR14(2)  <---------YAB1            ---------->DOF2    <------ZmHOX2a(1) ------>MYB52(1)      --------->MYB46(3)       --------->ANAC46       --------->ATHB51 <---------ATHB12 -----MYB52(2)<---------ARR14(2)----------->GT1--------->ANAC55(1)    --------->AHL20(2)    <--------   taaccacaggcctgcaaatattcaacaacagagattgtgattaatttacacataacattccaaaaagatgaataatttataggaatcaaatcaactttga  28012600                                                                                                   --                                                                                               ------                                 >>>>>>>>>>>>>AGL25                                            <-----                              =======================================================================                              <---------------AGL15                                           -------                              --------------->AGL15                                           -------                             <-----------------AGL3                                           <------                             ========================================================================      --------->ANAC58       ----------------->AGL1                                           -------      --------->ANAC58       ----------------->AGL3                                           <------      --------->ANAC46       <-----------------AGL2                                           ------- <---------GLK1(1)           ----------------->AGL2                                  --------->ANAC58 --------->GLK1(1)           ======================================================================== <---------ARR14(2)      --------->MYB59                                             --------->ANAC58 --------->ARR14(2)  <---------ZAT6                                          --------->TOE2(2)<------ --DOF2             <---------TOE2(3)                              <---------ANAC46  --------->GLK1(2)   gagaattctcgcaacttaaactagggttatgtccaaaaatagaaactagagcctaggctgtgatgaattgagtatataacatatgagaagctattagcca  28012700           <----------DOF2 -------->DOF2 <---------TOE2(3) --------->AGL15 ----------AGL15                                                                  ------->TEIL ==========MADS_MADS                                                             <---------ARR14(2) ---------->AG <---------TOE1(3)                                          --------->LBD16           < ---------->AGL1                                                          ------>ZmHOX2a(1)         - -----------AG---------->DOF2                                            --------->TOE1(2)          < ===========MADS_MADS                                                 <---------ARR14(2)            - ---------->AGL3                                       <---------ZAT2<---------HSFC1(2)            -- -----------AGL2                                       --------->ZAT2--------->HSFC1(2)   =========== ---------->AGL2                                      --------->ANAC58--------->ARR11(3)  <------ZmHOX2a(1) ===========MADS_MADS         ---------->DOF2         --------->ANAC58--------->ARR14(2)  =========== -----------AGL3        <------ZmHOX2a(1)     <---------ICU4         --------->HSFB2a(1)<---------TOE2(3)   aaaaaggaaggaactttaaggcagaaggagagaaaagaaatttgatgagcattacccagcaagaacatcgaagttcctgagaagaaccttgaggaaattg  28012800         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       <---------ARR14(2)       --------->ARR14(2)       <---------ARR11(3) ---------At4g35610 -------->At4g35610                          <---------GLK1(2) ---------ZAT2        <----------DOF2      <---------YAB1 -------->ZAT2     ------>MYB83         ------->TEIL                       <---------LBD16 ---->NtERF2       ------>MYB46(1)<----------DOF2                     <---------ZAT14 ==============HOX2a_HOX2a       <---------ANAC58                 --------->ANAC46 ===============HOX2a_HOX2a      <---------ANAC58    ------>ZmHOX2a(1)--------->ZAT14        <-------   ccagctccagatcccatcaccaagctttgattttggcttttgaatctgattcttcctccactaaaaacacactactctctggagatggattgagactttg  28012900                       --------->ETT(2)                    <---------ANAC46                   <---------AtMYB61                 <-----------RAV1(1)                 <---------ANAC46                          <---------ANAC58                 <---------ANAC58                   <---------WOX13(1)                 <---------ANAC58                <---------YAB1            --------->ATHB12                     <---------AHL20(2)                --------->DAG2            <--------ATHB1                   <----------DOF2 *TSS     --------->CCA1(2) -------->P  <           <---------ATHB12                  <---------DAG2<---------ANAC46       ---------->DOF2   <           --------->ICU4                 <-----------GT1  <---------ANAC58  ----------->GT1      <-- ---DOF2   <---------YAB1<---------AGP1  <-----------GT1   ----------->GT1 <------------CBF   -------   agagagagaacgaatgattgtgtggtagacctgttgaaagtttttaactttttaattgatgtcgtgaaaacgatatgaattggaaaaagctacccattaa  28013000               --------->YAB1              --------->KAN4(1)                                              --------->WRKY12      <----------DOF2    <---------DAG2                                     --------->DOF5.7(2) <----------DOF2         <----------DOF2                                 <---------TOE2(3)  --------- ---------ANAC58    ---------->DOF2                               ---------->DOF2     --------->AHL20(2) ---------ANAC58  --------->YAB1         ----------------->AGL1--------->TOE1(3)    --------->ANAC58 ---------GT1 --------->ICU4           <-----------GT1        --------->At4g35610   --------->ANAC58 -->AHL20(2) <---------KAN4(2)    <------------CBF    ----------->GT1   <---------DOF5.7(2)----------   tttctttcctttcggaataatcaaaagctttttggaaattgttaccaaaacgaaaatggaaattagcttaaagtaaacgttgacacaagaaaataaagta  28013100                                                                         <------MYB83 <---------ZAT14                 <---------------AGL15                                   <------MYB46(1)                 --------------->AGL15                                   ----------->GT1                <-----------------AGL2                                   <---------MYB46(3)  ------->TEIL                ========================================MADS_MADS       <---------AtMYB61   <--------                <-----------------AGL3                   --------->AHL20(1)           --------->ZAT14   <----------DOF2                   <-----------GT1     <---------AHL20(1)     <-----------GT1   <-- >DAG2          ----------------->AGL2                   <---------ARR11(3)     --------->YAB1    --- >DOF2          <-----------------AGL1  <---------------AGL15       <---------LBD16 --------------->AtSPL8   gtaatctttttctaaaattctctatatggaaggaagttttaactatagaaggaaaacaaaatatttgtattggggaggttaattacaatgtactgtatct  28013200                             ----------->RAV1(1)                             <---------DDF1                             ------>NtERF2                             <---------RAP2.6(3)                            <---------ETT(1)                   ----------->GT1    <---------ANAC58                           ----------------->AGL1       --------->ANAC58          <---------ANAC58<--       <---------ZAT6  <-------GAMYB --------->AHL20(2)------->TEIL         <----------DOF2       <-- -CCA1(2)              <---------At4g35610         <---------TOE2(3)     --------->ARR11(3)      <--- -------HSFB2a(2)      --------->At4g35610    <---------MYB52(1)     ---------->DOF2             <--- ------>HSFB2a(2)     <-----------RAV1(1)<-----------GT1--------->ANAC58 <---------ARR11(3)      ----   ctcgaaatactgtaagtagtttttcagttgccgacataagaaaataccgttttgatgtatgcaacaagttaaaaagaacttttgtcttgacttgaataag  28013300     <---------ANAC58     <---------ANAC58   <-----------GT1                                                          --------->ANAC55(2)    --  <<<<<<<<<<GT-3b                                               ---------->DOF2                <----- -------RVE1(1)                                              ------>ZmHOX2a(2)                 ------ -------CCA1(1)                                            <---------ARR11(3)          <----------DOF2 ------AHL20(1)                                 <---------TOE1(3)           <---------ANAC55(2)<----- ------ARR11(3)                       <---------At4g35610  --------->ARR11(3)--------->ICU4    ------ ----->ARR11(3)                <-------TEIL     <---------TOE2(3)         --------->ICU4      -------   atatttttcttgactatgaagttgaagaaaatatacatgaagatgacattagggttttgatgatcttaaagatgaaataagtattagctctttgcacagc  28013400                                                  <------ZmHOX2a(2)                                                 --------->ARR14(2)                                             --------->At4g35610                                             <------NtERF2                                             <---------At4g35610                                             --------->ZAT2                                            ------>NtERF2                                            ----------->RAV1(1)        --------->ATHB12                   <---------ATERF1(2)       --------->KAN4(1)                   --------->ATERF1(2)       <---------HSFB2a(1)                 <-----------RAV1(2)       --------->ICU4                    ----------->RAV1(1)      <---------KAN4(2)                 --------->ANAC58 --------->ALFIN1                       --------->ANAC58 ------->ALFIN1                       <---------ATERF1(1) ----At4g35610              =============================HOX2a_HOX2a                   <---------ANAC58 --->At4g35610    <-------TEIL      <---------ANAC58                                   <---------ANAC46 ----ZAT2  ========================HOX2a_HOX2a   <---------ARR14(2)                    <---------ANAC58 --->ZAT2  ------>ZmHOX2a(2)------>ZmHOX2a(1)<---------ZAT2                 <---------YAB1        --- -->DEAR3(1)   --------->KAN4(1)    <---------ANAC58             --------->ANAC46<---------YAB1  ----   cgagtgggaatgatcgaacattcattcttcctcccaaggcgagcgccagcagatcgaactcttctacataccacagttctgatactattgcctgtatcaa  28013500  Previous    Next  AGI:  At1g74520.1    Description:  ATHVA22A (Arabidopsis thaliana HVA22 homologue A). Identical to HVA22-like protein a (HVA22A) [Arabidopsis Thaliana] (GB:Q9S7V4); similar to ATHVA22C (Arabidopsis thaliana HVA22 homologue C) [Arabidopsis thaliana] (TAIR:AT1G69700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76903.1); contains InterPro domain TB2/DP1 and HVA22 related protein (InterPro:IPR004345) Range:  from: 28011635    to: 28012961    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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