Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC58             --------->ANAC58             --------->ANAC46                 ------>ZmHOX2a(1)    <---------YAB1                         <-----------GT1  <---------At4g35610                     <-----------GT1                                       ----- >GT1 <---------GLK1(2)             <---------WOX13(1)        <----------DOF2 <-----------GT1--------   tcgctgatgattctcacgctatgttctctgtgtctctcattgattttcctcttcttagttgtctctttcactgttccattttccctcttcttctccgatg  27997400                                       <----------CDC5                                     <---------ANAC46                                  ----------->TGA1         <-------TEIL                                  ----------->HVH21    --------------->AtSPL8          ------>ZmHOX2a(1)<---------ANAC58            <---------------AtSPL8   <---------ALFIN1        <---------ANAC58--------->At4g35610         --------->MYB46(3) ----->DOF2             <---------MYB52(1) <---------At4g35610    --------->ANAC46 ->At4g35610 <------------------------ANAC81           <---------------AtSPL3                    ----   aagcgccatctcctctgttttgctctgtttcgttccatgacgcagagctgtatgaattgagtacatctacagaacaaacaagaccatgagacctctatgt  27997500                                                                            <------NtERF2                                                                  <---------ANAC55(2)                                                                <-----------RAV1(2)                                                               <------ZmHOX2a(2)                    <                                        <-----------GT1       --------->ARR11(3)                <----                               --------->YAB1                 <---------ARR11(3)                -----                               --------->AHL20(2)         <-----------------AGL1   <---------REM1(1)< --->TEIL    ------->TEIL      <---------AHL20(2)        <-------TEIL---------->DOF2      ---------->DOF2   atatagctctatatgaatataaaaactatgtaataatatgttataccttcagacaagggttcaagatcaggtaaaggcagagaagttgtagtaaaaggaa  27997600                                    ------>ZmHOX2a(2)                                    ============================HOX2a_HOX2a                                   =============================HOX2a_HOX2a                                   <------ZmHOX2a(2)                           <---------ANAC58                                  <---------ARR14(3)                           <---------ANAC58                                  --------->ARR14(3)                  --------->At4g35610                                  <-----------ARR10                   --------->ZAT2                                  --------->ARR14(2)                  <---------At4g35610 ---------ANAC58                ----------->ARR10                     <---------ZAT2----------->GT1 -----GLK1(1)     <---------ANAC58<---------ARR14(2)     <------ZmHOX2a(1)     <---------ANAC46 ---->GLK1(1)     <---------ANAC58<---------ARR11(3)   <---------TOE2(3) <-------TEIL ---------ANAC58  <---------ANAC46--------->ARR11(3) ---------->DOF2<------ZmHOX2a(1)           -----   atgcttgagagccagagttttcttggagagcaagaagatcttcttcccagtcgaataaaggataacttaaggagctgcattgcgtttggaaaaatacaga  27997700         <---------YAB1       --------->YAB1   <---------AHL20(1)   --------->AHL20(2)   <---------AHL20(2)                                            --------->TOE2(2)   --------->AHL20(1)                                            --------->TOE1(2)  --------->AHL20(2)                  ------->TEIL     --------->HSFB2a(2)                        ---  <---------AHL20(2)        <-----------GT1          --------->At4g35610             <---------KAN4(2) ------>GT1                 --------->YAB1     ---------->DOF2<-----------GT1<------ZmHOX2a(1)<------ZmHOX2a(1)   gaaaataaattataagaaaacaaaaactaataacaaaatgaaactatacaaaagcttctgaaattaacctgtgatcaaaggatggagaatgagctaggaa  27997800                            <---------At4g35610                            --------->At4g35610                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                   <-------GAMYB                                                                 <---                   <---------ANAC58                                                              <---                   <---------ANAC58        ---------->DOF2          <---------ANAC46             ----                  <---------MYB46(3)   ---------->DOF2              ----------->GT1           <------ ------>YAB1   <----------DOF2 >>>>>>>>>>>>>>>>>LFY     --------->CCA1(2)                     -------   tgagaatgacttctgttctttggttgtgtgatcagccattgtaaagaaagtgagagagatagaagttgtgttgtgaaactcgatgatgcgagaaaagatt  27997900                                    --------->CCA1(2)                                   <---------ARR14(2)                                       <-------- <-----------GT1                   --------->ARR11(3)                                    <---------ANAC46 ------AHL20(2)                    --------->ARR14(2)                                    <---------ANAC58 --------TBP                       <---------ARR11(3)                  ------->TEIL      <---------ANAC58 ----->AHL20(2)                    --------->ARR11(1)               <---------YAB1    --------->ALFIN1 ---ARR11(3)                     ----------->ARR10               --------->ICU4     <---------O2 -->ARR11(3)             <---------ZAT6           ---------->DOF2<---------YAB1 <------ZmHOX2a(1)  <-   tatatactacattcagagaagagactagtggtagtaagatatggagagagaataaagaatggaagtgatgatgaatctattaggagaagtggggtattga  27998000                                                        --------->TOE2(3)                                                        --------->YAB1                     <---------ZAT6                <---------YAB1                     ----------->GT1            --------->ICU4                   <---------ANAC58             <---------YAB1              <---------ANAC58                --------->CCA1(2)              <------------CBF               --------->ARR11(3)              <---------ANAC58               --------->ARR11(1)             --------->ATHB12                <---------ARR14(2)            <---------AHL20(2)               <---------ARR11(3)           <---------WOX13(1)                --------->ARR14(2)    ----------->GT1     ------>NtERF2 <---------ANAC58    <---------HSFB2a(2)         <------MYB46(1)<---------ANAC58    <---------RAP2.6(2)                --------->HSFB2a(2)         <------MYB83   <---------ANAC58   --------->RAP2.6(3)   <---------AHL20(2)----------->ARR10      <---------MYB46(3) ----------->HVH21 <---------ANAC46   <---------ANAC46 ----------->GT1   <---------AHL20(2) ----CBF  <------------CBF            <---------ANAC55(2)     --------->ATHB12    <---------ANAC46 -----------CBF<---------WOX13(1)   --------->CCA1(2) <---------TOE2(3) <-----------TBP----------->ARR10   gtattgacggctaattgattgtcgtgttaaatttggagttacgagaagatatgattaatgttaattagtgggtaatttataggggcgtttagatttggat  27998100                                        <---------ICU4                                        --------->YAB1                                        <--------HAHB4                                        --------->ATHB12                                       <---------ATHB12                                       --------->ICU4     --------------->AtSPL3                                   ------------>CBF       <---------------AtSPL8                                  --------->ANAC58        --------------->AtSPL8                     --------->AtLEC2--------->WOX13(1)  <---------ZAT18                            <                  XXXXXXXXXXXXXXXXXXXX>MIR780.2          --------->ZAT18                        <----             <---------CCA1(2)    --------->ANAC58       --------->ZAT14                   --------->ANAC58           <---------ANAC58       --------->AtLEC2       <---------ZAT14                   --------->ANAC46           <---------ANAC58  ----------->HVH21   --------->AHL20(2)                        --------->ANAC58       <----------DOF2    --------->ARR14(2)   ----------->GT1            ------->TEIL  --------->ARR14(2)     ------>ZmHOX2a(1)    <---------ARR14(2) <---------ANAC46             <-------TEIL  <---------ARR14(2)   tagactcctcttttcgtctctccatgcatatatgacatgcaatcatttcgagtaaatagtgtagtactactcaatgtacatgttcttatatatacgcata  27998200                  <---------ICU4                 <---------YAB1                 --------->ICU4               <---------ICU4               --------->YAB1            <---------MYB52(2)                                       <--              <---------YAB1          --------->MYB46(3)                                         <---             --------->ARR11(3)     <-----------GT1     <---------TOE2(3)                       -----             <---------ARR11(3)     <---------ICU4      <---------YAB1                    <---------YAB1           --------->ICU4        --------->YAB1    --------->ATHB12                     --------->ATHB51   --------->bZIP60(2) --------->ANAC55(2)         --------->YAB1                      --------->ICU4   --------->ANAC46    <---------ANAC55(2)       <---------WOX13(1)                    <---------YAB1 -------TEIL--------->YAB1      <---------AHL20(2)--------->ICU4                      --------->TOE2(3) ---TEIL   <---------ATHB12 ----------->GT1--------->MYB52(1)                ----------->GT1    <----   catacacatcacaatgatcatgattatgtattgtttaataaccactaactgaatgattaagataacaaaatgaaacgtatggttaaaacattattgtaga  27998300  Previous    Next  AGI:  At1g74480.1    Description:  RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G18790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64546.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035) Range:  from: 27996693    to: 27997839    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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