Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->At4g35610       ---------->DOF2                                        <---------At4g35610     <------ZmHOX2a(2)                                    --------->At4g35610                    <---    <---------ARR11(3)                                    --------->ZAT2                         <---   --------->GLK1(1)     ---------->DOF2                  <---------At4g35610                    <--- ----ZmHOX2a(2) --------->ZAT2----------->GT1             <---------ZAT2<---------REM1(1)    <------- ->ALFIN1       --------->At4g35610                    <---------At5g28300              <---------MYB52(1) -MYB52(1)  ----------->RAV1(1)                 ------>ZmHOX2a(1)     <---------At4g35610    <-------   atcagagatcaaagcaccagctaaatgcaaaggagtgaattgagcatgtcctgcattcacagctagctcatgagctgtagcaattgtctcgtttgtcttg  27943500                                                                                  <----------DOF2                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                               <---------ARR14(2)                                                                               --------->GLK1(2)                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------ANAC58                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------ANAC46                              --------->LBD16                     <---------ARR11(1) ------ANAC58   <-------TEIL              --------->LBD16                      --------->ARR14(2) --- --ANAC58 <---------LBD16      <----------DOF2   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------- --ANAC58--------------------->WRI1      <---------LBD16                 --------->TOE2(3)  ---------   tgtgtgaatttctctggattcatcttcgattagcttttgtaatccctgaaaaaaaaaaaaaaaaaaaaaaactaatctcagtatcttttgtaaaccctaa  27943600                                                                                  <---------MYB52(1)                                                                                 <-------GAMYB                                                   ---------->DOF2              <---------ANAC58 ------>YAB1  --------->ANAC58                  --------->TOE1(3)               <---------ANAC58 >TOE1(3)     --------->ANAC46          <------ZmHOX2a(2)   --------->CCA1(2)   <---------ANAC46 >TOE2(3)     --------->ANAC58<---------GLK1(2) --------->TOE2(3)          --------->MYB52(2)   <----   tcacaaacacaaaaacacacaaatgagaacaagattgtcgcgatcatttaccttaaaacgatatatgagaactgggtttgtttcgttgagtttcttcaat  27943700                  --------->At5g28300      <------ZmHOX2a(1)     <---------ZAT18   <---------At4g35610                                                         --------->YAB1   --------->At4g35610           <---------DAG2                       ----------->GT1 <-----------RAV1(2)  ---------->DOF2        --------->GLK1(2) --------->At5g28300   --------->TOE2(3) -----ATHB12     ----------->GT1 <----------DOF2--------->WOX13(1) --------->ICU4    <----------DOF2   gagccagaggacttcttctcggtaaaaagtcttctctttttgcagagaatcaagcagattatagcggtaatgttgtaaaattgataactttagatgtttg  27943800                                                                  ---------->DOF2                                      <----------DOF2          --------->HSFB2a(2)                            <------NtERF2                      <---------HSFB2a(2)             <---------ANAC58    --------->RAP2.6(3)         --------->At4g35610             <---------ANAC46   <---------WRKY18(1)          <---------At4g35610             <---------ANAC58  ----------->HVH21     <------ZmHOX2a(1)                 <---------MYB52(1)  <----------DOF2        <------ZmHOX2a(1)         *TSS   <-------TEIL --------->CCA1(2)       <-----   gatactttgtgaattgcgagagagcgaggaggcatgactgcttttgtatatggaaggagattcatctggaaagatagagaactatcgtcgtttttttgca  27943900                                                                                       ------->MYC3                                                                                       <-------PIF5                                                                                       ------->MYC2                                                                                       <-------MYC2                                                                                      <---------TGA1a                                                                                      --------->TGA1a                                                                                      <---------O2                                                                                      <---------ANAC55(2)                                                                                      --------->O2                                                                                   ----------->HVH21                                                                                  <-----------HVH21                                                                              <-------TEIL   <-------                                                                             ===================MYC_MYB                                                                         <-----------RAV1(2) --------                   --------->ARR14(2)                                   <---------MYB52(1)   <-------                   <---------ARR14(2)                                  ----------->RAV1(1)   --------           -------->P  <---------HSFB2a(2)                            ----------->HVH21<-------MYC3        --------->HSFC1(2)                                            <---------ETT(1)<---------ANAC46        --------->At4g35610                                  ===================================bZIP_DOF        <---------HSFC1(2)                                   <----------DOF2 <--------P------->PIF5 ----AtLEC2--------->MYB52(1)   --------->ALFIN1 ------------>CBF    ------>ZmHOX2a(2)<---------bZIP60(2)   tagaactagaagctaccagagaattcgagagagagtgtgagagaaacaaatgtcaattccactctttttgatccgacaggtagatgtcacgtggaatttt  27944000                                                                                             --------                                                                   --------->AHL20(2)     --------->ATHB51                                                                   <---------AHL20(2)     --------->AHL20(2)     --------->AHL20(1)                                            <---------AHL20(1) ------>NtERF2     <---------AHL20(1)                                  <----------ID1             <---------LBD16     --------->AHL20(2)                             --------->YAB1 --------->AHL20(1)--------->RAP2.6(2)     <---------AHL20(2)                            --------->AHL20(2)          <----------DOF2------- --HSFC1(2)            <-----------GT1 <-----------GT1 --------->YAB1        ------>ZmHOX2a(1)<------ ->HSFC1(2)    <---------ANAC46 <---------AHL20(2) <---------AHL20(2)    <-----------GT1<----------DOF2 --HSFB2a(1)  <------NtERF2    <---------AHL20(2) --------->AHL20(2)<---------AHL20(2)--------->LBD16 ->HSFB2a(1) ------>NtERF2 <----------DOF2  <----------DOF2       --------->AHL20(2)---------->ID1   cgcttattttattgccagcgtggaatttccttttttatttgtaacgctttgaattaataacaacaaaaattaatttctcctcttttgccgcattatttaa  27944100                           --------->AHL20(2)                       <---------YAB1                      --------->AHL20(2)                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)                     --------->YAB1                  <---------ICU4                                                                  ---                 --------->ICU4                                              --------->YAB1   <------                 <---------ATHB51                                     --------->ATHB12       <-------         ----------->GT1   --------->YAB1<---------TOE2(3)            -------->ATHB1        <-------- ->AHL20(2)      --------->AHL20(2)    --------->AHL20(2)             --------->ATHB51    --------->CCA1(2) -->AHL20(2)     <---------AHL20(2)    <---------AHL20(2)            <---------YAB1      --------->ARR11(3) ---AHL20(2)   --------->YAB1<---------YAB1--------->YAB1 XXXXXXXXXXXXXXXXXXX>MIR3434    <---------ARR11(3)   ttttagacgaatgctaaaaataattaaaattataaatctaattaatgaaaactgaacttggctaattgtctattattgatcaaaatccaaagatttacgt  27944200                                             <---------HSFB2a(2)                                           --------->At4g35610                                         ------>ZmHOX2a(2)                                       --------->ARR11(3)                                       <---------ARR11(3)                                       <---------ARR14(2)                                       --------->ARR14(2)                                      <---------CCA1(2)                                <---------AHL20(2)                                --------->ATHB12                         ----------->GT1     <-------                                --------->AHL20(2)                     <---------ANAC58      --------                                --------->ATHB51                       <---------ANAC58    <---------                                -------->ATHB1                         <---------ANAC46  <-----------HVH21 ------>AHL20(2)                <---------ICU4                 ---------->DOF2     ---------->DOF2 ---ANAC46                      <--------HAHB4        --------------->AtSPL8      <---------AHL20(2) --TOE2(3)                     --------->ICU4--------->HSFB2a(2)--------->DAG2    --------->AHL20(2) ---GT1                        <---------ATHB51       <---------------AtSPL8  --------->AHL20(2)-----   ttaaatatcaaaaatacacaaatagaagaaacaattatttggatcttctgaaaatagatgtacaaaaaaggaggcttgtataaattaaaggagtcagatg  27944300                                                                                           <---------ARR14(2)                                                                                          ------>ZmHOX2a(1)                                                                                          ===========                                                                                        ------>ZmHOX2a(2)                                                                                        =============                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                            ------>ZmHOX2a(2)                                                                            =====================HOX2a_HOX2a                                                                            =========================                                                                            =========================                                                                           ======================HOX2a_HOX2a                                                                           ==========================                                                                          --------->ARR14(3)                                                                          --------->ARR14(2)                     <---------ARR11(3)                                   <---------ARR14(2)                     --------->ARR11(3)                                   <---------ARR14(3)                    <---------CCA1(2)                                     <---------ARR11(3)                   <---------AHL20(2)                                     --------->ARR11(3)                 <---------YAB1                    ================================HOX2a_HOX2a --At4g35610    --------->AHL20(2)                 ===============================HOX2a_HOX2a  ------ ->At4g35610  --------->AHL20(1)                   ------>ZmHOX2a(1)      <---------GLK1(2)--------->ARR14(2) --RAV1(2)   --------->AHL20(2)   *TSS    ------>ZmHOX2a(1)  <---------YAB1<------ZmHOX2a(2)   ====== ------>GT1  --------->YAB1   <-----------GT1     --------->TOE2(3) <-----------GT1     =============   gaaatatttcagaaataatattatatcttatttaacaaatagtccttcatttcctcagccattttcattttcacaagatccttgtgttgatcctatcctc  27944400  Previous    Next  AGI:  At1g74310.1    Description:  ATHSP101 (HEAT SHOCK PROTEIN 101); ATP binding / ATPase. Identical to Heat shock protein 101 (HSP101) [Arabidopsis Thaliana] (GB:P42730;GB:Q8W4F2;GB:Q9LE57); similar to APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G15450.1); similar to CLPB-M/CLPB4/HSP98.7 (HEAT SHOCK PROTEIN 98.7), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT2G25140.1); similar to CLPB2, ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT4G14670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64447.1); similar to heat shock protein 101 [Vitis Range:  from: 27940169    to: 27943851    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g74320.1    Description:  choline kinase, putative. similar to choline kinase, putative [Arabidopsis thaliana] (TAIR:AT4G09760.2); similar to choline kinase, putative [Arabidopsis thaliana] (TAIR:AT4G09760.1); similar to unknown [Populus trichocarpa] (GB:ABK94958.1); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Choline kinase, N-terminal (InterPro:IPR007521); contains InterPro domain Choline/ethanolamine kinase (InterPro:IPR002573) Range:  from: 27944334    to: 27946865    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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