Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->TOE2(3)                   --------->ANAC58                                   --------->YAB1                          --------->ANAC58                                 ------>MYB46(1)                    --------->WOX13(1)                                 ------>MYB83                    <------NtERF2--------->CCA1(2)                                --------->WOX13(1)             <---------ANAC58                            <-----------GT1                    <---------ANAC46                       --------->TOE2(3) <-------TEIL          <---------ANAC58   --------->ANAC46                  <---------ANAC58<---------ATHB12      <---------YAB1 --------->YAB1  ----------->GT1 ---ZmHOX2a(1)    <---------ANAC58--------->MYB46(3)<---------GLK1(2) <---------ATHB12 <---------ZAT6   gactcgtttctgtcaaattggcttacataaataccaatcaacgttcattacatggaatcttattggcgtccaatcataagctataagcagtgtaaaatgg  27932800                                                       <---------ANAC55(2)                                            <------MYB46(1)                                            --------->HSFC1(2)                                            <---------HSFB2a(1)                                            <---------HSFC1(2)                                            <---------MYB46(3)                                      --------->LBD16  <---------ANAC46                                  <---------ARR14(2)   <---------O2                                 <---------CCA1(2)--------->ANAC46                              <----            ---------->DOF2 <----------DOF2 <------MYB83                                   --------->YAB1   ---------->DOF2         <---------DAG2   --------->HSFB2a(1)                          --------->GLK1(2) --------->ANAC58     <-----------HVH21  <------ZmHOX2a(1)                          ---------->DOF2 --------->ANAC58--------->CCA1(2)--------->ARR14(2)----------->HVH21           --------->TOE2(3)   aaaacgaaagcgatgaaagaaatgggtcaccttttgtatccgaggatggttcccctcacgtagagtctgcaaaattagataacataaaaagaatcagact  27932900           --------->ATHB12           <---------ICU4          <---------YAB1                       <---------CCA1(2)          --------->ICU4                  --------->At4g35610                              <------ZmHOX2a(1)      <---------------------WRI1          --------->ZAT2                               --------->ALFIN1  <----------DOF2                         <---------At4g35610    --------->YAB1  --------->HSFB2a(2) ------DOF2--------->YAB1             --------->GLK1(2)    --------->YAB1        <---------HSFB2a(2)   ttcgcattatcgatgattacaagattactaaaccatgaagaatcagctcaaatctagacaataacaatagtagcaaaacagtttcagaagtgaggaaaac  27933000                                                                                             --------                                                                      ----------->GT1       <--------            <---------ATHB12                                        ---------->DOF2        ----------      --------->TOE2(3)                                          --------->ANAC58         <---------ARR11(3)    <---------ARR14(2)                                      >>>>>>>>>TBF1             ---------->DOF2   <---------CCA1(2)                            <------ZmHOX2a(2)--------->ANAC58  >>>>>>>>>TBF1   agagcaaatctcaaatgatacaccgatagaaaaccatcttggtgatatagatcaaacttgaagaagaacgaaaagagaaatagaagaagaaagacctgac  27933100                                         --------->ARR14(2)                                         <---------ARR14(2)                                        --------->GLK1(1)                                       <---------KAN4(2)                                       --------->ARR14(2)                                       ---------->TaMYB80 *TSS                  <---------WRKY18(1)  <---------ARR14(2) <---------At4g35610                 --------->WRKY38(1)--------->DEAR3(1) <---------ZAT2                 --------->WRKY12 --------->At4g35610  <---------At4g35610                 ----------->HVH21--------->LBD16   <---------At4g35610            <------NtERF2         ------>NtERF2     --------->At4g35610 --->HVH21 <---------SPL7         <---------At4g35610  --------->At4g35610        >>>>>>>>>TBF1 -MYB59   <---------ANAC58    --------->ARR14(2)    --------->ZAT2           <----------ID1 ->RAV1(2)<---------ANAC58    <---------ARR14(2)    <---------ZAT2    ----------->GT1   tcgttctccttggcgtcccttgaccattttcgattccgccgaatatccaaaggctgctgctgctactcgagggagaaaaacgaagaagaagccctaatat  27933200                                                             --------->ICU4                                                             <---------YAB1                                                        <---------------AGL15                           --------->ICU4              <---------YAB1              --------->ZAT6             --------->ARR11(3)--------->YAB1 <---------AHL20(2)     ---- <----------DOF2  <------------CBF   <-----------GT1--------->ICU4      ----------->TBP     <--------   gggcttatgggccttaacactattggggcattagtatattaagcatcttgggccattactataatgaataacatataaaaatgggcttctctatttttat  27933300                                                                            <---------WRKY18(1)                                                                           --------->WRKY38(1)                                                                           ----------->HVH21                                                                           --------->WRKY45                                                                           --------->WRKY12                                                                          --------->DOF5.7(2)                                                                          <---------MYB52(1)                       *TSS   <---------REM1(1)                          <-------GAMYB                      ------>ZmHOX2a(2)                                <------NtERF2                     <------ZmHOX2a(2)                               <---------DEAR3(1)                    <---------ARR11(3)                               --------->DEAR3(1)        <-----        ----------->RAV1(1)<-----------RAV1(1)                 <---------GLK1(2)  <---------ANAC58 ----->TOE2(3)      --------->ARR11(3)        <---------MYB52(1)--------->GLK1(2) <---------ANAC58 -AHL20(2)      --------->MYB52(1) --------->ARR11(3)  <----------DOF2------>NtERF2--------->LBD16   ctcaaaacaacaacaaaaaaacgatctctatgttgtagttcttgaacagttggctctcttttcaagaatcgtcgccgttgacctccgtgcctctccgatc  27933400                                               ---------->DOF2                                        --------->At4g35610                  ---------->ID1   <------                ----------->TGA1 --------->ANAC46                 <---------AHL20(2)       <---------WOX13(1)            --------->AHL20(2)   --------->ANAC58                 --------->AHL20(2)<-------GAMYB<---         <----------DOF2   <-------TEIL <---------At4g35610      --------->AHL20(2)<-----------RAV1(1) -ZmHOX2a(2)<---------AHL20(2)   --------->ANAC58          <------NtERF2 <----------DOF2<---------YAB1   aacttcccattcttttaaatgacgagagattcatcaaggaacagctcattaaagccatggcctcgaaaaaaatttctttttccttctgttgtgattgtca  27933500                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                   <-----------HVH21                                                                                 --------->DEAR3(1) -                                                                             <---------WRKY38(1)-----                                                   --------->DEAR3(1)        --------->ETT(2)--------                                                 --------->At4g35610        --------->PCF5   <-------                                                 ------>NtERF2            <---------MYB46(3)<------NtERF2                                                 --------->LBD16         <---------AtMYB61  ---------                                                --------->DEAR3(1)       --------->ALFIN1   ---------                                             --------->DEAR3(1)         <---------MYB52(1)  ---------                     --------->ANAC55(2)     --------->AtMYB61         --------->LBD16     ------>NtERF2                 --------->DOF5.7(2)         <---------ALFIN1        <---------LBD16       <---------RAP2.3(1)               <---------ANAC46             --------->ZAT2          ------>ZmHOX2a(1)      <---------ATERF1(1)               <---------ANAC58           --------->AtMYB61         =======================HOX2a_HOX2a               <---------ANAC58           <---------ALFIN1        --------->ATERF1(1)     --------->DEAR3(1) ---YAB1  <---------ICU4                 --------->MYB46(3)      <---------ATERF1(1)<------ZmHOX2a(2) ------YAB1   <------NtERF2            <-----------GT1     <-----------RAV1(1)<---------ALFIN1<------NtERF2   ttgttgggataatcgtggcgtttacttatcagtccaagttgaaaccacctccgccgaagctatgtggctcctccggtggtccaccgatcacagcgccgcg  27933600 --------->DAG2 -NtERF2 ----ANAC46 -->LBD16 ---At4g35610                                                    --------->LBD16 ---LBD16                                                       --------->RAP2.6(2)              <--- --------->DOF2                                                 --------->ANAC46              <------ ---->LBD16                                                     ------->GAMYB               <-------- ->DEAR3(1)                                                    --------->MYB46(3)        ------>ZmHOX2a(2) --ANAC46                 <---------ANAC58                   --------->MYB52(1)         <------ZmHOX2a(2) >RAP2.3(1)               <---------ANAC58                --------->At4g35610          ------->TEIL - >DEAR4(2)       <------MYB83  ---------->DOF2            <---------At4g35610          <---------ARR14(2) >ATERF1(1)      <------MYB46(1)          ------->TEIL ---------->DOF2                 --------->ARR14(2)   gataaagcttcaagatgggaggtatttggcttacaaagagcatggacttccaagagagaaagctaaccgcaaaatcgtcttcatccatggatccgattgt  27933700  Previous    Next  AGI:  At1g74270.1    Description:  60S ribosomal protein L35a (RPL35aC). Identical to 60S ribosomal protein L35a-3 (RPL35AC) [Arabidopsis Thaliana] (GB:Q9C912); similar to 60S ribosomal protein L35a (RPL35aA) [Arabidopsis thaliana] (TAIR:AT1G07070.1); similar to unknown [Populus trichocarpa] (GB:ABK93065.1); contains InterPro domain Ribosomal protein L35Ae; (InterPro:IPR001780) Range:  from: 27931832    to: 27933158    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g74280.1    Description:  hydrolase, alpha/beta fold family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15922.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 27933323    to: 27935025    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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