Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->ANAC58                                            --------->YAB1                   --------->ANAC58                                            <-----------GT1                <---------ZAT18                                             --------->YAB1                <------NtERF2                                               <---------ICU4             <------NtERF2                                                 <---------YAB1          ------>NtERF2                     ------>ZmHOX2a(1)              --------->ICU4       <---------LBD16                     --------->TOE2(3)             <---------ICU4  --------->ARR14(2)                   <---------GLK1(1)                 --------->YAB1  <---------ARR14(2)                  <---------ANAC58                  --------->ICU4  --------->ARR11(3)                  <---------ANAC58                  <---------YAB1  <---------ARR11(3)               <---------MYB52(1)                 --------->YAB1 --------->GT1--------->bZIP60(2) <-------GAMYB <---------ZAT6     ----------->GT1 -----O2 ------>NtERF2           <---------MYB46(3)               --------->DAG2       <---------ANAC58 ---HVH21--------->LBD16 <-----------HVH21 <---------ANAC46      ---------->DOF2       <---------ANAC58   gtggtatcttccggcctcggcactcaccttcatggccgttgagttccttagagataacttcagagagaaaagtaataataataacaatgtcgtctcaaat  27923600                                                                          --------->YAB1                                         <--------P               ---------->ARF1                           <---------ZAT14                    <---------ANAC58                           --------->ZAT14 --------->MYB52(2) <---------ANAC58                 <---------ARR11(3)   <---------TOE2(3)     --------->GLK1(2)                 --------->ARR11(3)   <---------TOE1(3)    <---------GLK1(2) ---------->DOF2           <------ZmHOX2a(1)     <---------AtLEC2<------ZmHOX2a(1)---------->ID1         <------ZmHOX2a(1)   ttgagcatagagaggaaaacatcttctacttcagtgcatgaaggttagtgaggactagcgagattcttgtctccaagtataaagagtgagaggagcattc  27923700                                                                                                <----                                                                                                -----                                                                                    <---------ZAT14                                                                                    --------->ZAT14                                                                                  --------------->AtSPL3                                                                                  --------------->AtSPL8                                                                                --------->ARR14(1)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                          --------->GLK1(2)    --------->ARR14(2)                 <XXXXXXXXXXXXXXXXXXXXMIR2939          ------------>CBF        <---------ARR14(2)          ----------->TBP                   --------->ARR14(1)           --------->YAB1       <------        --------------->AGL15              <---------ARR11(3)          <---------YAB1        <-------        <---------------AGL15              --------->ARR14(2)       ------>ZmHOX2a(1) ------->TEIL       <-----------------AGL3              <---------ARR14(2)      --------->TOE2(3)<---------ZAT18       <-----------------AGL2              --------->ARR11(3)<---------YAB1  ----------->ARR10-------   acaaacttgtctataaatggctcagtgttttgttttctcttctaagatactgtgaacaacaatctgattccttattaataagatactgtacttaatcttt  27923800    <-------GAMYB                                                                         ----------- -----AHL20(2)                                                                          ------>ZmHOX2a(1) ---->AHL20(2)                                                             <------------CBF ----DOF2                                              <------------CBF   <---------AHL20(2)   <----- --ICU4                           ---------->DOF2----------->GT1         <---------AHL20(2)   <------ -->TOE2(3)             ------>ZmHOX2a(2)      ---------->DOF2--------->YAB1        ---------->ID1   aattttcgttgatataagcctggtgatccctaaaactaaagtattaagagaaagaaaaattgaattataagtttatttattgttttgttcctatatatac  27923900                     <---------At4g35610                     <---------ZAT2                     --------->ZAT2                     --------->At4g35610                                                   <------NtERF2           --------->ARR11(3)                  <----------ID1                            <---------ANAC46 >TBP <-----------HVH21              <---------ANAC58                                    <---------ANAC58 --TEIL    <---------ARR14(2)        <---------ANAC58                  --------->TOE1(3) <---------ANAC58 -----GT1 <---------CCA1(2)      <---------GLK1(1)  ---------->DOF2    --------->TOE2(3) <---------RAP2.6(2)   atctccaaggtcaaatcttggacagctcgaactgggtatgcgtttaaaatcgacaaaagagaaatagcctaaaccctaaaaaccagagatggcgtcttcg  27924000                                                               <---------GLK1(2)                                                          --------->SPL7                                                        ----------->HVH21                                                        <---------SPL7                                                        --------->LBD16                                                      <---------LBD16   ------>ZmHOX2a(1)                                                <---------HSFB2a(1)  <------ZmHOX2a(2)                                                <---------HSFC1(2)  --------->ARR14(2)                                                --------->HSFC1(2)----------->ARR10                <-                                                --------->HSFB2a(1) <---------ARR14(2)           <---                                               <---------KAN4(2)--------->CCA1(2)               -----                            <---------ARR14(2) --------->ARR14(2)<-------TEIL               ---------                           <---------GLK1(2)   <-----------ARR10--------->ARR14(1)          <--------                       <---------TOE1(1)       --------->GLK1(2)--------->GLK1(2)           ---------                       <---------TOE2(1)      <---------GLK1(2)--------->ARR14(2)           <--------                <-----------HVH21          --------->ANAC58    <---------ARR14(2)           <--------               <---------bZIP60(1)         --------->ANAC58  ----------->ARR10              --------- <---------SPL7--------->bZIP60(1)     --------->ANAC46--------->DEAR3(1)        <---------ANAC46<---   tctcgttcggagaaacgatgtcactacgaggttctcggtatcagcaaggaatcttcgccggacgagattcgatcctcttatcggcgtttagctctgcagc  27924100                                                  ------>NtERF2                                                  --------->ABI4(1)                                                 ------->GAMYB                                                 --------->DREB2C(2)                                                --------->DEAR4(2)     ------>NtERF2                              <------NtERF2    --------->ANAC46                            --------->ORA47(2)    --------->LBD16                             --------->MYB46(3)    <---------ETT(1)                            --------->DEAR3(2) --------ALFIN1                                 --------->ATERF1(1) --------TGA1                                  <---------ATERF1(1) ---->bZIP60(2)                                ------>NtERF2                   <---------TOE1(1) >At4g35610                                   --------->DEAR3(1)               <---------TOE2(1) -ZAT14                                      --------->MYB46(3)          --------->ANAC58 >ZAT2                                     --------->ANAC58              --------->ANAC58 -At4g35610            --------->At4g35610 --------->ANAC58            <---------DOF5.7(2)    <------ZmHOX2a(2) -ZAT2   --------->ANAC58      --------->MYB52(1)--------->DEAR3(1)  --------->DOF5.7(2)     <------- >ZAT14  --------->ANAC58   <---------GLK1(2)<---------ABI4(2) --------->ARR11(3)            -------- --------HVH21   ---------->DOF2      --------->At4g35610      <---------ARR11(3)   --------->GLK1(2)   gtcaccccgacaagctaatgaaagccgctggattatcggaggctgaagccaccgcccagttccaagagctcgttcacgcttacgaggttctatccgatcc  27924200                                                                                              ------>ZmHOX2a(2)                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                  <---------ANAC46          ---------                                                                 <------NtERF2              <--------                                                                <---------MYB46(3)          <--------                                                                --------->MYB55(2)         <---------ARR14(1)                                                                ------>NtERF2              <---------CCA1(2)                                                               <---------DEAR3(1)         --------->LBD16                                                               --------->ALFIN1          --------->ANAC55(2)                                                             <---------ATERF1(1)         <---------ANAC55(2)                                           --------->At4g35610--------->ATERF1(1)        <---------HSFB2a(2)                 <---------GLK1(2)         <---------At4g35610<---------MYB52(1)         --------->HSFB2a(2)    <---------ANAC58                 <---------AHL20(2)     <---------DEAR3(1)           <---------ANAC46    <---------ANAC58 <---------YAB1  --------->AHL20(2)     <---------MYB46(3)          <---------LBD16 --ARR14(2)    ----------->ARR10  <---------GLK1(2)         <---------DREB2C(2) <------NtERF2<------ZmHOX2a(2) ->ARR14(2)    <---------YAB1------>ZmHOX2a(2)            <---------At4g35610  <---------MYB46(3)   caaggagcgagcctggtatgattctcatcgatctcagattttatttgctgaccatagttcagccggtggctcgaagtctggtggctctgttccggatcta  27924300                                          --------->LBD16                                         <---------LBD16                                         <---------ANAC46                                      --------->CCA1(2)                                     --------->ARR14(2)                                     <---------ARR14(2)                                    <---------At4g35610  <----------DOF2            --------->ARR14(2) -ARR14(2)                   <---------ARR14(2) -ARR11(3)                   <---------GLK1(2)        <-----------GT1 >ARR14(2)                <---------HSFB2a(2)    <------ZmHOX2a(1) ---ARR10                 --------->HSFB2a(2)---------->DOF2                              --------->TOE2(3) >AGP1                --------->KAN4(2)--------->MYB52(1)                                 --------->TOE1(3) -ARR11(1)    <---------ALFIN1      --------->At4g35610                      <---------AHL20(2) -AGP1   ---------->ARF1 <---------LBD16<---------LBD16           <-----------GT1  <---------ZAT6   ttcgctttcttctctcccactgtatattctggatactcagataccgggaaaggattttacaaggtgtattacgatgtgtttaatagtgtttacctcaacg  27924400                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                           <---------RAP2.3(1)                                                                                          <---------DEAR3(1)                                                                                          --------->bZIP60(1)                                                                                          <---------bZIP60(1)                                                                                          <---------RAP2.3(3)                                                                                          <---------RAP2.6(2)                                                                                         --------->ATERF1(1)                                                                                        --------->MYB52(1)                                                                                       ----------->HVH21                                               --------->HSFB2a(1)                     ----------->TGA1                                               <---------At4g35610                   <---------At4g35610                                               --------->HSFC1(2)                    --------->TGA1a                                               <---------HSFB2a(1)                   ================                                               --------->ZAT2                        --------->At4g35610                                 <---------GLK1(2)                                   <---------TGA1a                          <---------TOE2(3)    <---------ZAT2                        --------->O2                    <------MYB83 <---------ARR14(2)            <---------ARR14(2)    <---------ZAT2 <                    <------MYB46(1)            <---------HSFC1(2)                    --------->ANAC55(2)                   --------->MYB59--------->GLK1(2)           --------->GLK1(1)      <---------O2 ---                  <---------MYB55(1)           --------->At4g35610   <---------GLK1(2)<-----------HVH21                 <---------MYB52(1)   <-----------HVH21   <---------LBD16            --------->ZAT2 <        --------->HSFB2a(2)      --------->ARR14(2)   <---------ATHB51      ------>ZmHOX2a(1)<-------        <---------HSFB2a(2) <------ZmHOX2a(1) ----------->ARR10--------->GLK1(2)   <-----------RAV1(2)   agattaagttcgcgagaacgttaggtttgaggatggattctgtgagggaagctccgattatggggaatctagagtctccttatgctcaggtgacggcgtt  27924500  Previous    Next  AGI:  At1g74240.1    Description:  mitochondrial substrate carrier family protein. similar to SAMC2 (S-adenosylmethionine carrier 2), binding [Arabidopsis thaliana] (TAIR:AT1G34065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64435.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 27921057    to: 27923800    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g74250.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23636.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR00 Range:  from: 27923989    to: 27926075    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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