Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC55(2)                                                          <---------ANAC58                                                          --------->ANAC55(2)                                                      <---------DAG2               <------ZmHOX2a(1)                                                   <-----------GT1          <---------YAB1                                              --------->AHL20(2)            --------->ICU4         ----------->GT1                      <---------AHL20(2)         <---------YAB1        <-----         <----------ID1                       <---------YAB1             --------->ICU4    <---------TOE1(1)        ----------->GT1                      --------->AHL20(2)        --------->YAB1      <---------TOE2(1)      ---------->DOF2  <------------CBF      <---------AHL20(2)     <------ZmHOX2a(1)<---------TOE2(1)   <---------TOE2(3)  <---------ICU4      <---------ARR11(3)     <---------At4g35610 <---------TOE1(1)  ---------->DOF2     --------->ATHB12    --------->ARR11(3) <-----------HVH21    <----------ID1<---- ------->TOE2(3)     <---------YAB1      <---------RVE1(1)<---------ANAC58--------->YAB1 <------ZmHOX2a(1)   tcattaaagaaaggaaaaaaaacatcattggcattttacgaagagattttaattagccttacgtttcagaggatgatgatgatgaggacgaggacgagga  27918000                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                     --------->AHL20(2)                                                      ------->TEIL        --------->ANAC46                                                                  --------->AtLEC2        --------->ANAC58                                                                  --------->ANAC58        --------->ANAC58                                                                  --------->ANAC58 -ZmHOX2a(1)         <---------AHL20(2)<---------At4g35610                            <------ZmHOX2a(1) -----------------WRI1<---------AHL20(2)  <------ZmHOX2a(1)                       ---------->DOF2<---   cgatgaacacaagcaagaagagattaattttagaaaatttcagaggatgtttttttttggtgttggaatttggagttgagagtttaaaggacatgcacgc  27918100                                   --------->ZAT18                                   <---------ZAT18                               <---------ICU4                              <---------YAB1                              --------->ICU4                            <--------HAHB4                            -------->HAHB4                            <---------ICU4     ----------->GT1        --------->ATHB12 ---->ANAC46                --------->YAB1 ->MYC3                     <--------ATHB1 --MYC3                     --------->ATHB51                                                        - --MYC2                    --------->ICU4                                                         <-- ->MYC2                    <---------ATHB51                --------->ANAC46                  -------- -->ANAC46                 <---------YAB1  <---------AHL20(2)       ================================= -->ANAC58               --------->YAB1    --------->AHL20(2)       --------------->AGL15    <------- -->ANAC58 <-----------GT1 --------->AHL20(2)             ---------->ID1            <---------WOX13(1) --------HVH21         --------->AHL20(2) --------->YAB1 <-----------GT1 ---------->DOF2 <---------ICU4   gtcaaggaggtttttacttactgaaaataataattagtgcccaattttaatcaactatttttcgccattgctaagtaaagaagaagattgatcattttaa  27918200                                 --------->TOE1(3)                                 --------->TOE2(3)                          <---------MYB46(3)                          <------MYB46(1)                          <------MYB83                         <---------AtMYB61                        <--------P                      --------->ATHB12  <---------ARR14(2) <---------TOE2(3)  --------->ARR14(2) <---------YAB1                          ----------->GT1 -------->LBD16<---------------AGL15                      <------NtERF2 -------LBD16  --------------->AGL15                      <---------At4g35610     --------->ICU4----- ->AHL20(2)   <-----------------AGL3  <---------LBD16 <-----------HVH21         ---------->DOF2 <---- ==============================MADS_MADS--------->LBD16 <---------WRKY12      --------->At5g28300---- --AHL20(2)   --------->ANAC46   <----------DOF2   ---------->DOF2           ----------->GT1   ------   tccggtttcggtttctactcaatatggttggtttactttaaccgggtctaaataaaagtcagcgagtgaatcaaatcgacggtaaagattaactcaaata  27918300          <------ZmHOX2a(1)    ----------->HVH21    ------->GAMYB                                                     --------->HSFC1(2)   --------->MYB46(3)                                                 <---------HSFB2a(1)  --------->At4g35610                                  <---------ANAC58                <------ZmHOX2a(2) --------->MYB52(1)             --------->ANAC58       <---------ANAC58    --------->HSFB2a(2)  <---- ---->AHL20(2)                  --------->ANAC58       <---------ANAC46    <---------HSFB2a(2) <----- -----AHL20(2)              --------->YAB1    --------->ZAT6*TSS      <---------HSFC1(2)  --------->At4g35610 ----->WOX13(1)      --------->ICU4  <-----------RAV1(2)    <------------CBF          --------->ARR11(3) --->AHL20(2)        --------->GLK1(2)        <-----------GT1   ---------->DOF2       <---------ARR11(3)   aatcaacggacaggataagcgaaattcttaccataagcctcagggttttcactactggcgagaattgaaagacgcttcgagagagatagatcatctccgt  27918400                    <---------ARR14(2)                 <------MYB46(1)                 <------MYB83                 <---------ANAC46                --------->MYB55(2)                <---------MYB46(3)             <---------ANAC58                                        <----------DOF2             <---------ANAC58                                       <---------ANAC58             <---------ANAC46                                       <---------ANAC58      <----------DOF2            --------->MYB55(2)                                   ---------->ID1          ------>ZmHOX2a(2)            <---------MYB46(3)         <----------DOF2         --------->MYB52(2)      <---------ARR11(3) -----MYB52(1) --------->ALFIN1 <---------GLK1(2)        <---------At4g35610           --------->ARR11(3) --GAMYB--------->ATHB12   <---------ANAC46  <----------DOF2 <---------MYB52(1) <---------YAB1   taaaccctagcgattgggtgggtatactttcgtcgattcttctttttctttatgttttaagctgtttgtttctttcgattttgtgattcgatcttttaat  27918500                               --------->KAN4(2)                            <---------GLK1(2)                   --------->LBD16                   <---------At4g35610                 ------>ZmHOX2a(2)                   --------->At4g35610                <------ZmHOX2a(2)                <-----------GT1               --------->ARR14(2)           <---------YAB1                          --------->ANAC58               <---------ARR14(2)           --------->ICU4           <---------YAB1 --------->ANAC58              <---------DEAR3(2)          --------->YAB1   <---------ATHB12  <----------DOF2 ------->TEIL   ccgatgtttcattcgtcgatccgaaaactagattgttctctgtatgatgattttctgctcaatctttgtttgtgattctcttttgcaagcctatgaattt  27918600                                                          --------->WRKY38(1)                <---------TOE1(3)                <---------ZAT14                <---------TOE2(3)        <---------ARR14(2)                <---------YAB1           --------->ARR14(2)               <---------MYB46(3)             <---------AHL20(2)       <---------ANAC58    --------->WRKY12----------->GT1          --------------->AGL15       <---------ANAC55(2) ----------->HVH21                         -          <---------------AGL15       <---------ANAC46  <---------At4g35610                        <-         <-----------------AGL3       <---------ANAC58  --------->At4g35610          --------->TOE2(3)      <----------DOF2               <---------ANAC46    <-------GAMYB  <----------DOF2    <---------GLK1(2)   catttggactttcattttatggttctgactactgagtgatgcgtatatgtgtttagtgagttgaccttgtaagctttggttaatttttcttaaattctcc  27918700                                     --------->REM1(2)                                  <---------ANAC58                                  <---------ANAC58                                  <---------O2                 <---------HSFB2a(2)<---------REM1(1)                 --------->HSFB2a(2)--------->ALFIN1                                                <                <---------ANAC58  <---------bZIP60(2)                                               -           <-----------RAV1(1)    --------->O2                                                      <       --------->ARR11(3)         <---------ANAC46                                                <--     ----------->HVH21         ----------->HVH21          <------ZmHOX2a(2)                       <-- -------->YAB1  <---------ANAC58  <---------ANAC55(1)    --------->ARR11(3)                   ------- --------ATHB12 <---------ANAC46  <---------TGA1a        <---------ARR11(3)                <---------AtLEC2   aatcgaaatgaccttgttgctggaactagaaatttgacgtgtagcaaaacttgagaacagatcatgaagtttttttttttttttttgtattgtgcatgat  27918800                                                                                               <-----                                                                                               <-----                                     --------->ATHB12                                         <------                                    <---------YAB1                                           --------                             <---------YAB1                                               <---------MYB46(2)     <---------YAB1        <----------DOF2                 <---------ANAC58               <---------- ---------ANAC58          <---------ANAC46                 <---------ANAC58               <---------MYB111(1) -------->ANAC55(2)       <---------ANAC58               <---------ANAC58                 <---------MYB111(2) ---------ANAC58          <---------ANAC58               <---------ANAC46            --------->HSFB2a(2) -------AHL20(2)      <---------ANAC58                   <---------ANAC58      xxxxxxxxxxxxxxxx>smallRNA(i) ---------GT1         <---------ANAC58        --------->ATHB12               <-------TEIL --------->MYB46(3) -->ATHB12          <-----------GT1<---------TOE2(3)  <---------SPL7 --------->YAB1  <---------HSFB2a(2)   ttacttgatgaaagaatgtttttttcttgcttttattgacgattgaattgatgggtcttacgcgtgtgtattcatgagtttcatcttctgtaactacctt  27918900  Previous    Next  AGI:  At1g74230.1    Description:  GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding. similar to GR-RBP3 (glycine-rich RNA-binding protein 3), RNA binding [Arabidopsis thaliana] (TAIR:AT5G61030.1); similar to unknown [Brassica rapa] (GB:ABB97027.1); contains InterPro domain Eggshell protein (InterPro:IPR002952); contains InterPro domain RNA recognition motif, glycine rich protein (InterPro:IPR015465); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 27918360    to: 27920744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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