Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ANAC46                                               <---------ANAC58                                          ------->TEIL                                     --------->CCA1(2)                                    --------->ARR11(3)                                    <---------ARR14(2)                                ----------->GT1                                    --------->ARR14(2)                              <-------MYC3                                    <---------ARR11(3)                        --------->ZAT18                 --------->ANAC58   --------->ARR11(1) --------->AHL20(2)     <---------ZAT18                 --------->ANAC58 ----------->ARR10    <---------AHL20(2)     --------->ZAT14 <------     ----------->GT1          --------->YAB1   <---------ANAC58     --------->YAB1  ------->MYC3----- >AHL20(2)---------->DOF2    <---------YAB1 <----------DOF2    --------->AHL20(2)<---------ALFIN1   gcagagacagagaaaagctaagcactgtattatcagaagatatggactttcttgtattaaaacaatgaaataagaattagtccacacatggaaaatatca  27909400                                                                            --------->HSFB2a(2)                                                                          ----------->RAV1(2)                                                                --------->ANAC58                                                                --------->ANAC46      --------->ANAC58           <---------ICU4     --------->bZIP60(2)   <---------At4g35610      --------->ANAC58           --------->YAB1     --------->ANAC46      --------->At4g35610      --------->AtLEC2    <---------TOE2(3)       <---------ALFIN1       ------->TEIL ---YAB1 ----------->RAV1(1)    --------->ICU4  ------>MYB46(1) --------->ANAC58 ----->DOF2 ------->GAMYB---------->DOF2        ------>MYB83  ---------->DOF2   aagtgagcatgcaacagaaaaatgttttaaagtaatcagtatggtataccttccacatcatcaaacaagccactgcatctggagcttgataagttcaaac  27909500                                                                                           --------->At4g35610                                                                                         --------->SPL7                                                                                         <---------ZAT18                                                                                       <---------SPL7                                                                          --------->ARR11(3) <-------                                                                         <---------GLK1(1) <------NtERF2                                --------->CCA1(2)                        --------->GLK1(1) <---------At4g35610                    ----------->RAV1(1)                       --------->ZAT14          <-----------HVH21                 --------->ANAC58             --------->ARR11(3)   ---------->DOF2<---------WRKY38(1)                 --------->ANAC58    <------ZmHOX2a(1)        <---------ZAT14    ----------->HVH21          ---------->DOF2      <---------ARR11(3)             <---------ZAT18   <-----------HVH21  --    <---------ARR11(3)         --------->ARR11(3)<----------DOF2  --------->AtMYB61  --------->MYB46(3)    --------->ARR11(3) ---------->DOF2        <---------ARR11(3) --------->ANAC46--------->WRKY18(1)   ttcgaacatcttcaaagggatgcaacaaagaaagatttaggagagaattatcttttaggctcagtccaccaaaggaaatctcggtcacccgtccgcttac  27909600            ------->GAMYB           --------->ANAC58           --------->ANAC58           --------->DEAR3(1)           <---------ALFIN1       --------->MYB46(3)                                                                <------ZmHOX2a(2)       <---------MYB52(2)                                                                ============      --------->ANAC58                                                                  <---------ARR11(3)      --------->ANAC58                                                          --------->ARR11(3)      --------->ANAC46<---------ETT(2)      --------->ATHB12              --------->ARR14(2) ---DOF2  >>>>>>>>>MYB2              <-------GAMYB                        <---------ARR14(2)       -- ------->ATHB12       --------->ETT(2)     <---------YAB1             <---------LBD16   --------->ARR11(3)   acgattgcaagcaacgcccttccatcgacagcaatcgctcgttgtatcattggtccaagtagggagaacagactcggattcagttcttgagatcatgtgt  27909700                     <----------DOF2            ---------->DOF2    --------->At4g35610                                  ------->GAMYB    <---------At4g35610        <---------ICU4           --------->MYB46(3) --------->LBD16    ------>ZmHOX2a(2)                 ------->TEIL ------>ZmHOX2a(1)--------->ARR11(3)                  <-----------GT1 =========================HOX2a_HOX2a              --------->AtLEC2 ==========================HOX2a_HOX2a             --------->ANAC46                       ----------- =======HOX2a_HOX2a<------ZmHOX2a(2)         <---------CCA1(2)  <---------ATHB12   <-----------RAV1(2) --------->RAV1(2)<---------ARR11(3)    <----------DOF2 <------------AtMYB77    <---------CCA1(2)   ttcctgagctcaaacaaagcgatcttttcttcatcaatacaacttttgtatccatgtaactgccccatcagtagcatcacccatatcaggttgtgaccca  27909800      ------>MYB46(1)      ------>MYB83                                                               --------->YAB1    --------->AtMYB61                ---------->DOF2        ------->TEIL       <---------TOE2(3) >HVH21          --------->YAB1  ------------------------>ANAC81       ---------->DOF2         ------   agaacaccttcccttccattgaaaatgtgatggaagaaaaaaagaagagaagaaaatgtatgaaactcaaactcaaagattaatgaaaacacttcaaggc  27909900                                                                                         <-----------                                                                                       <---------AHL20(2)                                                                               ------->GAMYB                                                                              --------->MYB46(3)                                                                            <---------DOF5.7(2)                                                                           <---------WRKY12          <---------ARR11(3)                                               <---------WRKY38(1)          --------->AHL20(1)         <---------GLK1(2)                     <---------WRKY45 <--------          --------->ARR11(3)         <---------ICU4                       --------->WRKY18(1)    <---         --------->AHL20(2)       --------->YAB1                         <-----------HVH21  ---------     <---------AHL20(2)     <-------MYC3          --------->LBD16  <-----------TGA1    --------->AHL20(1)     --------->AHL20(2)     ------->MYC3          ----------->GT1  --------->TOE2(3)   <---------YAB1  ----------->GT1        <---------ALFIN1       <---------LBD16   <----------ID1      --------->AHL20(2) ------>CBF             <---------REM1(2)    --------->REM1(1)  --------->MYB52(1)    --------->YAB1   aatgtagttaaatatatacaagtgtctccacgtttataagaatttctacatccggtgaaaacagaataacgtcaaggtcaacgacgaataatattggtta  27910000  ------------>CBF                    --------->CCA1(2) <-----------GT1                   <---------YAB1 -CBF                   <---------MYB59<-------TEIL -MYB46(3)              --------->TOE1(3)               <---------MYB52(1) ------YAB1             --------->TOE2(3)            <-------TEIL           --------->TOE2(3)       < -->GT1                <---------ANAC55(2)--------->ANAC55(2)  <---------YAB1                 <------   tatttacaatgttgaagtctctattacctaaacacttaagattcaagtgatcacattcgtttattttgactggtttagccttataagttatagtaccttt  27910100           <---------YAB1          --------->ARR11(3)          <---------ARR11(3)       <---------MYB46(3)                  <---------GLK1(1)        <---------ATHB12       <---------YAB1            <-----------HVH21           --------->MYB46(3)    ------------>CBF          --------->ARR11(3)        --------->bZIP60(1) <-------GAMYB  --------->WOX13(1)          <---------ARR11(3)        <---------bZIP60(1)<-----------RAV1(1)     <- ---------ATHB12             --------->YAB1        --------------------->WRI1       -------->P   <--- ----DOF2--------->YAB1     <---------ATHB12       <----------DOF2<----------DOF2 --------->MYB46(3)   gaatcattcaatgatatttgttatatgtcaatgatatttgttgaaatgcctctctttgatgtcatggcctttgaattctgttgaacaaccactagacttg  27910200                                                                                                  <--                                                                                                  <--                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                          <---------MYB52(1)                                                                                      ------>NtERF2<-                                                                                     <---------DEAR3(1)            ------>NtERF2                                                            --------->DEAR3(1)            --------->MYB52(1)                        ---------->DOF2           --------->MYB52(1)---           ----------->HVH21                        ------>ZmHOX2a(1)          ----------->HVH21  <--           ----------->TGA1                         ===============================HOX2a_HOX2a    <--           --------->WRKY12                       ----------->RAV1(2)       ------>ZmHOX2a(2)<-------GAMYB      --------->MYB52(1)                 ==================HOX2a_HOX2a    <---------AGP1<---------ANAC46      <---------ALFIN1                   <------ZmHOX2a(2)              <-------TEIL <---------ANAC46 -----ZmHOX2a(1)           <------ZmHOX2a(1) <---------MYB52(1)        <--------P  ------->GAMYB <--- ------TOE2(3)             =====================HOX2a_HOX2a          <---------MYB46(3)<------NtERF2<   aggaagcccaacgctgacggagttgatgaggaggctctcttggatcagttactcctgaaagtctgaaacagaggttgatctgtaacggcgtcgtttgttg  27910300  Previous    Next  AGI:  At1g74190.1    Description:  leucine-rich repeat family protein. similar to protein binding [Arabidopsis thaliana] (TAIR:AT1G74170.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G25470.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G74180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41813.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 27906251    to: 27909819    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version