Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ICU4                        --------->CCA1(2)              <---------YAB1     <---------YAB1      <---------ANAC46 --------->ARR14(2)                                    --------->AHL20(2)    <------MYB46(1)    <---------ARR14(2)                                  --------->TOE2(3)    <------MYB83 <---------TOE2(3)                                        --------->YAB1    <---------ANAC58   --------->ARR11(3)                           --------->YAB1    <---------ANAC46   <---------ARR11(3)                        <----------DOF2              >>>>>>>    <---------ANAC58 ----------->ARR10                          ------>ZmHOX2a(2)    ----------->HVH21 ->DAG2    <---------YAB1      --------->YAB1                 --------->ARR11(3)   <------MYB83 ->DOF2    --------->ICU4     <---------ZAT6                  <---------ARR11(3)   <------MYB46(1)   tgtatttggtgtgattatgaaggaagatactagtgataatttgtatttcaagtttcaaatccatgatctttaataaacataaatttggtgacagaaaacc  27889700                                                           ========================HOX2a_HOX2a                                                           <------ZmHOX2a(1)                                    <<<<<<<GRF7   --------->ANAC58          <------ZmHOX2a(2)                                   <-----------HVH21    <---------HSFB2a(2)--------->ARR11(3)                     <---------GLK1(1)            --------->ANAC58         --------->ARR14(2)                <---------LBD16   ----------->HVH21     --------->HSFB2a(2)<---------ARR14(2)          --------->YAB1         <---------MYB59 <-------MYC3              --------->AGP1------->MYC3          <---------ICU4        --------->At4g35610  ------->TEIL          <---------ARR11(3)<-------         <---------ATHB12       ----------->RAV1(2)<-------TEIL       --------->MYB52(1) <-------MYC3 --------->AHL20(2) --------->ARR14(2)           ------->MYC3  ----------->GT1<---------ALFIN1 >>MYB2 ------->TEIL<---------ARR14(2)      <-----------HVH21 <-----------------------TaNAC69(2)   aaaaaaaatgaatcattctctggatatgttgatgacctgacacagaggtcacatgcatctaggagaagtaaaaaacagatccactctctcacatgctttt  27889800                              --------->ANAC58                              --------->ANAC46                            --------->ANAC58                            <---------ALFIN1                            --------->ANAC46                            --------->ANAC58                          <---------ALFIN1                          --------->ANAC58                                        <---------AHL20(2)                          --------->ANAC58                                   <---------MYB59                          --------->ANAC46                                  <---------ANAC55(2)                 <---------ARR14(2)                                         --------->ANAC55(2)                 ------->TEIL --------->ANAC58                        <---------AHL20(2)      -------                 --------->ARR14(2)                             <<<<<<<<<<GT-3b  --------->AHL20(2)   <---------REM1(1)    <---------ALFIN1                 --------->ZAT6   <-----------GT1   --------- --------->At4g35610  <---------ALFIN1                 <-----------GT1--------->AHL20(2)--------->YAB1 ---DOF2        <---------CCA1(2)                   <----------DOF2 <----------DOF2    <---------YAB1   gtgagatgtagagcctctgtatctccacacacaccccttctccaatgtctctctcttttactctatttttcttttattacctatttaatatgataatcta  27889900                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                  <---------ARR14(2)              <--                                                                  --------->ARR14(2)             ----                              <------ZmHOX2a(1)          ----------------->AGL1                <-----                            <---------TOE2(3)   ------>ZmHOX2a(1)<------ZmHOX2a(1)           <-------                      --------->AHL20(2)    --------->GLK1(2)<---------ATHB12                --------    ----------->GT1   <---------AHL20(2)    <---------ARR14(2) <---------TOE2(3)            <-------- -->TOE2(3)           <---------AHL20(1)    --------->ARR14(2)--------->YAB1 ----------------->AGL3<- >GLK1(2)    <---------At4g35610       ---------->DOF2  <-----------------AGL1    <-----------RAV1(1)   aataagtggtttttttgctcacattttatttaggaaaaaaaaaaagaatcctgccattttccaataaggaaccccagtccccatatgtggctgaatttcc  27890000                                                                                         --------->GLK1(2)                                                                                       --------->HSFB2a(1)                                                                                       <---------HSFB2a(1)                                                                                       *TSS <---------MYB46(3)                                                                  <------ZmHOX2a(1) -------MYB52(1)                                                               ------>ZmHOX2a(2) ----->LBD16                                                                   =============HOX2a_HOX2a ----LBD16                                              ==============================HOX2a_HOX2a --ARR14(2)                                             <------ZmHOX2a(1)    --------->ARR14(2) ->ARR14(2)                                      --------->MYB52(1)          <---------ARR14(2) -GLK1(1)  <---------At4g35610            ----------->GT1                    <---------AGP1      ---- --------MYB52(1)---------->DOF2         <---------------AtSPL8             <---------CCA1(2)<-------   ggtttgttctctgagcagttatagcagtgagagagagagagagagagtacaaaacagaggaacatttagtctcttcttggatctgtaggagattcctttg  27890100                                               <----------DOF2                                              <---------ANAC58                                          <----------DOF2                                           -                                      <---------ARR14(2)                                           --                                     <-------GAMYB                                                 <-                                    <---------MYB46(3)                                             <-         <----------DOF2            <---------DEAR3(2)             --------->ATHB12                <-     <----------DOF2               <---------DEAR3(1)             <---------YAB1                   <- <----------DOF2                   <---------ANAC46--------->HSFB2a(2) <---------MYB46(3)          <- ------>ID1                        <---------RAP2.6(2)     <----------DOF2  <---------ANAC46<-------- ---DOF2 --------->TOE2(3)  --------->ATHB12  <---------ANAC58 <----------DOF2      <---------AHL20(2)   ttcctttctttctttaatctctcttcttcttgatttggcggtttctttgctttctgcaactctttcttttcattggttctgtagatttaaactcacacat  27890200              <---------MYB52(2)              --------->MYB46(3)         <-------MYC3        <---------TOE1(3) -------->LBD16                          ------->MYC3  ============================================== ------->ANAC55(2)                    --------->ANAC58 <---------------AGL15                    ----- --------ANAC58                       --------->ANAC58 --------------->AGL15             ------>ZmHOX2a(2) --------ANAC55(2)                    <---------ALFIN1<-----------------AGL2             <---------MYB59 --------ANAC55(1)                 <---------ZAT18 --------->ZAT14                     <---------AGP1 --------ANAC46                    --------->ZAT18 <---------ZAT14               --------->ATHB12  -- --------ANAC58------->GAMYB   --------->DAG2     <---------ZAT6         <---------AHL20(2)     ===== -ALFIN1 <------ZmHOX2a(1)   ---------->DOF2   >>>>>>>ZML2   <---------TOE2(3)  <---------YAB1<------   tccgtgttttaggacaacaaacttctcagacaaaaggggcacacatgttctagtgttctgtttatggtttagtagtttattgaagattggatctaattac  27890300                                                                                                   <-                                                                                                  <--                                                                                                  xxx                                                                                                  <--                                                                                                 <---                                                                                                -----                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                              <------                                                                                             <------ZmHOX2a(2)                                                                                             --------                                                                                             ========                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                     <---------TOE1(2)                      <--------                                                     <---------TOE2(3)              <----------DOF2<-                                            --------->LBD16                         -----------------          <-----------GT1                 --------->TOE1(2)                        --------------->AGL15   ----------->GT1                      --------->ARR14(2)                      <-----------GT1<----- =============MADS_MADS                 <---------ARR14(2)        ----------->GT1  <---------------AGL15 ------------>AG                  <---------ANAC46   <---------TOE2(2)  <-----------GT1 <-----------GT1 -------->DOF2                  <---------ZAT14 --------->GLK1(2)<---------TOE2(3)----------------->AGL3 ==================================================================================================MADS_MADS -----GT1<-----------GT1<----------DOF2 --------->GLK1(2) ----------->GT1  <----------DOF2  <--------   caaaagggtttttatctttctccctccttttgtcttcagtggaatctgggaatcttaggtttgtaaaaaggtttaaactttatttcctttttaagatccg  27890400    --------->ATHB12   <---------YAB1 -----MYB83 -------TOE1(2) xxxxxxxxxxxxxxxxx>smallRNA(si3) -------TOE2(2) ------MYB52(1) ---->LBD16 ===========================HOX2a_HOX2a -TEIL ->CCA1(2) ===========================HOX2a_HOX2a >ARR14(2) >AGP1<---------WOX13(1) >ARR11(3)                                                                                       ---- -ARR11(3)           <------ZmHOX2a(1)       <---------ANAC58--------->At4g35610                 ---- -----MYB46(1)  <---------REM1(1)            <---------ANAC58<---------At4g35610               <----- ---->WRI1      <---------ZAT6 <---------AHL20(2)     --------->AHL20(2)                       ------ ----ANAC46 <---------MYB52(1)--------->AHL20(2)      <---------AHL20(2)              <---------YAB1 -ARR14(2) <-------GAMYB      <---------AHL20(2)    <----------DOF2                 <---------At4g35610   taggtttgattgctgttagtgtaggactcagattaatttaggggttttcttgagctttaattaagctggagaagacaatgggtttcttctgatttgaaat  27890500                                                              <---------ANAC58                                                            --------->ALFIN1                                                          <------MYB46(1)                           ----------->GT1                <---------HSFB2a(1)                 ---------->DOF2                          <---------HSFC1(2)    ----------->GT1       ----------->GT1                 <------MYB83 ----->TOE2(3)--------------->AGL15                       --------->HSFB2a(1) ----->TOE1(3)<---------HSFB2a(2)                         --------->HSFC1(2)              <-------GAMYB ----ARR11(3) --------->HSFB2a(2)                 ------->TEIL<---------ANAC58           --------->MYB55(2) --->ARR11(3) <---------------AGL15            <---------YAB1<-------TEIL                <---------MYB46(3)   cttaaacggtttttttctacaaagagaagggctaaaattttggagttttatgaatatggaaggtgcgtcattctcgttatagttttaatggtggttactg  27890600  Previous    Next  AGI:  At1g74160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G18620.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G18620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49165.1) Range:  from: 27890087    to: 27895092    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version