Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC46                                                --------->bZIP60(2)                                                --------->ANAC58                                                <---------O2                                                --------->TGA1a                                                <---------TGA1a                             <---------MYB46(3) ========================bZIP_DOF                         --------->ATHB12       --------->O2                        --------->LBD16    ----------->HVH21                    ----------->GT1                     ------>ZmHOX2a(1)<------NtERF2                           --------->LBD16                   ------>ZmHOX2a(2) ------>NtERF2                        --------->ARR14(2)               <---------YAB1<------MYB46(1)    --------->ANAC58          --------->GLK1(2)             --------->YAB1  <------MYB83 <---------WOX13(1)              <---------ARR14(2) --------->LBD16 --------->ARR11(3)  <-----------HVH21       <----------DOF2  <---------LBD16 ---------ANAC46 <---------ARR11(3) --------->DEAR3(1)   ------->TEIL    <---------GLK1(2)       ----   ctccgtataatccgattatgatcctcccgattggttcgccgtcgattgacacgtcgatgaacgctttcttagtcggaatctggggaaaattggaaacaga  27856200                                                                                              -------                                                                                              <------            <------ZmHOX2a(1)                                                                 -------     <---------AHL20(2)                                                            <--------P<-------     --------->AHL20(2)                  <-----------GT1                         <---------ZAT6    --------->AHL20(2)      <---------GLK1(1)      ------>ZmHOX2a(1)            <---------TOE2(3)  <- ----->GLK1(1)              --------->GLK1(1)     --------->TOE2(3)             <---------TOE1(3)  <-   aatcgaattaataaggagacattgaaattgaaatccagtttataaacattttccttactctgttttcgcaatttgtgagattagggttagcaattgtatc  27856300                             <------NtERF2                            <-----------TGA1                            <-----------HVH21                           <---------ANAC58                                       <---------ANAC58                           <---------bZIP60(1)            --------->ANAC58        <---------ANAC58 -->ARR14(2)               <---------ANAC58        <------ZmHOX2a(1)           --------->GLK1(2) ---ARR14(2)               --------->bZIP60(1) <---------ANAC46     --------->ARR14(2) >TEIL<----------DOF2      --------->TGA2(1) <---------MYB46(3)     <---------ARR14(2) --CCA1(2)                 <---------ANAC46 --------->ALFIN1       <------ZmHOX2a(1)      --------->ICU4 --------ANAC58    --------->ANAC58       <---------ANAC58--------->ANAC46    <---------GLK1(2)     < --------ANAC58    --------->ANAC58       <---------ANAC58--------->ANAC58  <---------TOE2(3)       -   tgcttgagctttagagaagtcgagcaatggcgtcagagttgtttgagtggtgaggagtagaagcaacgaggatttactaagattccgtcgcgataatttg  27856400                                                       <------NtERF2                                                      --------->ABI4(2)                                                      <---------MYB46(3)                                                     --------->ALFIN1                 <---------DEAR3(1)                  <---------DEAR3(1)                 --------->ALFIN1         <---------MYB52(1)              <---------ANAC46  --------->MYB55(2)<---------ANAC46            --------->MYB52(1)  --------->ABI4(2) <---------ANAC58           ----------->HVH21    <---------MYB46(3)<---------ANAC58           <---------ATHB12    --------->ALFIN1   <---------DEAR3(1)             <---------At4g35610   <---------ANAC58           <---------MYB52(1) <---------LBD16  --------->MYB52(1)  --------->ALFIN1   <---------ANAC58        --------->SPL7<-------GAMYB------>NtERF2   --------->At5g28300<----------ID1 ---------ARR14(2)        ------>ZmHOX2a(1)  <-----------RAV1(1) ----------->HVH21   <---------ARR14(2) -------->ARR14(2)  --------->ALFIN1   <---------TOE2(3)         ----------->TGA1<---------LBD16   cagtttcgttccaatgacggaggtgctcctacggtggttctacggttgtgttgcggtggctctataggtgacggtagaaatttagcggatggggacaaaa  27856500                                                    <---------MYB46(3)                                                   <---------AtMYB61                         <------ZmHOX2a(1)                                                <---------ICU4                      <---------LBD16                                                --------->ATHB12                   <---------ANAC58                                             <---------bZIP60(1)                   <---------ANAC46                                   ------->TEIL<---------YAB1           --------->AHL20(2) --------->ANAC58         <---------ANAC58  ----------->RAV1(2) --------->ICU4           <---------AHL20(2) --------->ANAC58         <---------ANAC58 -------->P         --------->bZIP60(1) ----------->GT1   <---------ANAC58--         <-------GAMYB  --------->ETT(2)--------->ALFIN1 <---------ANAC46<-----------GT1   <---------TOE2(3)   gttttgcattgggttgcatcattttgtctacctgatgaaactgtgtgtcatcattggtggagggagatagataattaactagatttcgtggataaggaat  27856600                                       ------>MYB46(1)                                       ------>MYB83                                     *TSS                                    --------->MYB46(3)                               --------->ANAC58                               --------->ANAC55(2)                               --------->ANAC46                               --------->YAB1                               --------->ANAC55(1)                           ---------->DOF2                               <---------ANAC55(2)             --------->AHL20(1)                         --------->ANAC58         --------->YAB1  <---------YAB1                         --------->ANAC58        <---------YAB1<---------AHL20(2)                ----          <---------MYB52(1)   --------->ANAC58<-----------GT1 <---------AHL20(1)                ---- -------->DOF2       <-----------HVH21 --------->MYB52(1)      --------->AHL20(2)        ---------->DOF2   cgaaagttagccgtttcatttcatgtcacacaaacgtaaccaatcggatttatcatacttctcattttattaatcttttaaaagcccaaactaaagccca  27856700                                                                <------ZmHOX2a(1)                                                              <---------TOE1(2)                                                              <---------TOE2(2)                                                            <---------SPL7                                                            --------->TOE1(2)                                                           <---------MYB46(3)                                                           <---------ANAC46                                                         <-----------HVH21                                                        <------NtERF2                                                       --------->MYB55(2)                                                       <---------MYB46(3)                                                      <---------ANAC58                                                      <---------ANAC46       --------->ANAC46                               <---------ANAC58 ----->ANAC58       --------->YAB1                   <---------LBD16                           ------ ----->ANAC58  <---------MYB52(1)                  <---------DEAR3(1)                       <--------   agcccatatacaaaacccttattcataagtaagagagagactactacttcacgatggcgggtcgtaggaagaccgaagacttgaacttgccagtcgtcaa  27856800              ---------->ID1         <---------ANAC58         <---------ANAC46      <--------P     <---------ANAC58     <---------ANAC58     <-------GAMYB    <------MYB83                                                                          <---------AHL20(2)    <------MYB46(1)                                                                       --------->AHL20(2)    <---------MYB46(3)                                                                    --------->AHL20(1)   --------->MYB59<----------DOF2                                              >>>>>>>>>ARR2   <---------AtMYB61   --------->ZAT14<---------ANAC58                        --------->ATHB12 ---->DOF2<----------DOF2             <---------ANAC46                       <---------YAB1 ---HVH21<---------ANAC58             <---------ANAC58                 <-------TEIL       <---------AHL20(1)   agagtttggttgctttggccctttgtgaagtctatctactgcgtttgtaattttctcaaaaacaaatttgaaattcgttttgattgtatcattttattga  27856900                                               <---------AHL20(2)                                               --------->AHL20(2)                                              --------->AHL20(2)                                              --------->AHL20(1)                                              <---------AHL20(1)                  <----------DOF2             <---------AHL20(2)                  <---------DAG2             --------->AHL20(2)                 <---------ANAC58     --------->ANAC58            <---------MYB46(3)  ------>ZmHOX2a(2)        <---------AtMYB61     --------->ARR11(3)                   <---------ANAC58      <----------DOF2 <-----------GT1 --------->ANAC58             <---------ANAC58      --------->TOE2(3) ---------->DOF2 <---------ANAC58     --------->ANAC46 <---------WRKY38(1)       ----------->GT1   caaaaaagctttggtgtttgctttttactactgatctcgcacgcaaaattaatttagtcaacaaatttcgcttgcctaaaactaagttaaaacttaaaaa  27857000                                   --------->YAB1                              --------->ARR11(3)               <-----------GT1                              <---------ARR11(3)      --------->AHL20(2)                             --------->YAB1       ----------->GT1                            ----------->GT1      <---------ATHB12                                 <--           <---------YAB1 ---------->DOF2--------->ARR11(3)<---------AHL20(2)       <---------At4g35610      --------->YAB1  ---------->DOF2    <---------ARR11(3)--------->AHL20(2)       <---------GLK1(1)   caaaacaataactatgaaacaaaaaaaagaaagataataagaacatctccaatggtttaaattatatactcgttttggagaattggagatgctctaagtt  27857100  Previous    Next  AGI:  At1g74070.1    Description:  peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein. similar to peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT5G35100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68001.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 27855149    to: 27856637    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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