Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->At4g35610                                                                               <---------At4g35610                                                                             <---------WRKY12                                                                            --------->DOF5.7(2)                                                                           --------->TOE1(3)                                                                           <-----------TGA1                                                                           <-----------HVH21                                                                        ------>MYB83                                                                        --------->MYB52(1)                                                                        ------>MYB46(1)                                                                       --------->MYB55(1)                                                                      <---------MYB52(2)                                                                      <---------MYB59                                                                      <---------MYB111(1)                                                                      <---------MYB46(2)                                                                      <---------MYB55(2)                                                  <------ZmHOX2a(1)   --------->MYB46(3)           ------>MYB83  <---------ANAC46  <<<<<<<<<RAP2.2            <---------MYB111(2)           -------->P --------->ANAC46    <---------TOE2(3)          --------->ANAC55(2)    --------->YAB1 <---------ATHB12       <---------YAB1    <---------YAB1 --------->TOE2(3) ----MYB59 ------>MYB46(1)          <-------TEIL<---------TOE2(3)    --------->ANAC46 <---------ATHB12   aactaagcataccaactccaaatcacgacgtttatatgttcatttagattgaggaacgaattcttattctcacctaacgtcaactccaatgagttttgga  27845200                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                                <----                                                                                               ------                                                                                              -------                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(2)                         <---------ANAC58                                                 <---------ARR14(2)                         <---------ANAC58                                                 --------->ARR11(3)            <---------TOE2(3)                                                        <---------ANAC46         <---------WOX13(1)----------->GT1                               --------->At4g35610 <-------       --------->ATHB12  <---------ANAC46 --------->MYB46(3)             <---------At4g35610------>ZmHOX2a(2)      <-------TEIL <---------AHL20(2) <----------DOF2       ---------->ID1  ---------->DOF2<------ZmHOX2a(2)   gccacaagttcattgatgtttttaatagcctgtaatacacctttaccaccatagacgctcttgtctccatctctaagctcaagcgcttcgtagatcccgg  27845300                                                           <-----------HVH21      <---------ALFIN1                                 <---------ALFIN1    ------->TEIL                                    ------->GAMYB  <-------TEIL                  <------ZmHOX2a(2)   --------->AtMYB61 ------->At4g35610             --------->ARR11(3)  --------->MYB46(3) -------MYB46(3)               <---------ARR11(3) ------->TEIL   --------->GLK1(1)             <----- -----P               --------->SPL7              -------->P     <---------GLK1(1)    --------------- -----MYB52(1)       --------->MYB52(1)        <------ZmHOX2a(2)<---------ARR14(2) --------->GLK1(2) --->LBD16          <---------SPL7            --------->AGP1    <---------GLK1(2)<---------ATHB12 -->LBD16        --------->At4g35610         --------->At4g35610--------->ARR14(2)--------->YAB1 --LBD16       --------->MYB46(3)          --------->YAB1 --------->DEAR3(1) <---------YAB1   <------   tagatgcaccacttggaacagccgaacgatacagatcatcggtaatcagatcaacctccaccgtcggattccctctactatcaataatctgtctcgcttt  27845400                          <---------MYB55(2)                          <---------ABI4(2)                                                       <--                          --------->MYB46(3)           --------->ARR14(2)     --------->GLK1(2)   ---                         ------>NtERF2                 <---------GLK1(2)     <---------ARR14(2)  <---                        --------->RAP2.6(2)         --------->ANAC58         --------->ARR14(2) -----                        --------->ANAC46            --------->ANAC58         <---------GLK1(2)<------             <---------ALFIN1 --------->DEAR3(1)   <---------LBD16          --------->HSFB2a(1)------            <---------ZAT18--------->DEAR3(1)    ----------->HVH21        <------NtERF2    --------->SPL7   <----------DOF2 ------>ZmHOX2a(1)            ------>NtERF2           <---------ANAC46 <---------SPL7 ------HVH21--------->ZAT14<---------ALFIN1  --------->At4g35610   --------->ATHB12   --------->ARR11(3) -------->TaNAC69(2)   --------->MYB46(3)    <---------At4g35610  <---------YAB1      <---------ARR11(3) ----DOF2   <---------ZAT14--------->AtMYB61--------->DEAR3(1)    --------->ICU4----------------->AGL3   cactcctttcactctgcactccttagccaccaccgagcattggacaccgctgcgacggaatctcagacatgatggcgcagattccaaatatcgttcgccg  27845500        <---------ANAC46      --------->MYB52(1)     ----------->HVH21   --------->ANAC58   --------->ANAC58     ------>ZmHOX2a(2)   <---------ANAC55(2) <---------GLK1(1)                       --------->ANAC58   --------->ANAC46    --------->GLK1(1)                       --------->ANAC58   --------->ANAC55(2) <------ZmHOX2a(2)                       --------->ANAC46  --------->TOE1(2)   --------->ARR11(3)             --------->ANAC58 -------ARR14(2)      <---------AGP1                 --------->ANAC46 ------>ARR14(2)      <---------ARR11(3)             --------->ANAC58      --------->AHL20(2) ---NtERF2        ---------->DOF2                  ---------->DOF2   <---------MYB59 ---->LBD16      ==============HOX2a_HOX2a        <---------WRKY38(1)--------->TOE2(3) ---LBD16        <------ZmHOX2a(1)    <---------AtMYB61      <-----------GT1 --->LBD16       =============HOX2a_HOX2a         <---------WRKY45  <---------ANAC55(2)             *TSS   gaaacacgcgacggagagaggaaagatctctgaagatggtgaggttttgtagtcaaagccattacacgatacctaaaaaaaatactctctgtgattcttt  27845600                                                                             <------NtERF2                                                                           <---------DEAR3(1)                                                                          --------->ATERF1(1)                                                                         <---------ATERF1(1)                                                                        <---------DEAR3(1)                                                                    <-----------RAV1(2)                                                                   --------->ZAT14                                                                <------MYB46(1)                                                                <------MYB83 <---------------------WRI1                                                               <---------AtMYB61                                                               --------->MYB111(2)                                                               --------->MYB46(2)                                                               --------->ALFIN1                                                               --------->MYB111(1)                                                               <---------MYB46(3)                                                               <---------DEAR3(1)                                                               --------->MYB55(2)                                                              <---------MYB55(1)                             ----------->GT1                  <--------P--------->ALFIN1                      <---------AHL20(2)                     <-------GAMYB<------NtERF2                      --------->AHL20(2)             ------>ZmHOX2a(1) --------->ATERF1(1)        ---               --------->LBD16                       <----------DOF2--------->ATERF1(1)      --------               ----------->GT1      --------->AHL20(2)      <---------MYB46(3)              <------ZmHOX2a(1)             --------->At4g35610    <---------AHL20(2)      --------->MYB55(2)            <---------TOE2(3)   tgactaaaatggagaagcggagaataaaatgatgttatataatttgaaaaacgtccttttggaggttggtgcaggcggaggcgatgaaaactaaggagtc  27845700                                                                               <------MYB83                                                                               <------MYB46(1)                                                                     <------MYB83                                                                     <------MYB46(1)                                                                     <---------MYB46(3)                                            ---------->DOF2         <---------AtMYB61                                         <-------GAMYB              --------->MYB59                                        <---------ZAT6         <---------AtMYB61                                     <---------WRKY18(1)<-----------------AG   <---------DEAR3(2)                                    --------->WRKY12--------->HSFC1(2)      <---------MYB52(1)                                    --------->WRKY38(1) <-----------------AGL2--------->MYB59                                   <---------WOX13(1) --------->GLK1(2)   <------MYB46(1)         ---                                  <---------ANAC58  <---------HSFC1(2)    <------MYB83 ------------>CBF ------->DOF2       <-------TEIL  <---------ANAC58  --------->HSFB2a(1)   <---------DEAR3(2)     <--- --->GT1    ---------->DOF2      <---------MYB46(3) <---------HSFB2a(1)  --------->MYB59         ----   aaaagaaccatacttaaaccggttcattttccaattggttgactgttaaagagaagtttctggttttggtttggttcggttcggttcggaacaattcaaa  27845800                                                                           ==========================                                                                           ----------->RAV1(1)                                                                           --------->DEAR3(1)                                                                         ------>NtERF2                                                                         --------->ABI4(1)                                                                        --------->DREB2C(2)                                                                        <---------ATERF1(2)                                                                        --------->ATERF1(2)                                                                        --------->DEAR3(1)                                                                        --------->ANAC58                                                                       --------->ERF1                                                                       --------->RAP2.6(1)                                                                       <------NtERF2                                                                       --------->ATERF1(1)                                                                       --------->RAP2.3(1)                                                                      <---------At4g35610                                                                      <---------ATERF1(1)                                                                      --------->At4g35610                                                                      <---------DREB2C(1)                                                                      --------->ABI4(1)                                                                      <---------RAP2.3(1)                                                                      <---------DEAR4(2)                                                                     --------->DEAR3(1)                                                                     <---------ALFIN1                                                                     --------->ANAC46                                                                     --------->RAP2.6(2)                                                                     --------->RRTF1(2)                                                                     <---------ATERF1(2)                                                                     --------->RAP2.3(3)                                                                     --------->RRTF1(3)                                                                    --------->RAP2.3(1)                                                                    --------->RAP2.6(1)                                                                    --------->DEAR4(2)                                                                    --------->RRTF1(1)                                                                    --------->ORA47(2)                                                                    <------NtERF2                                                                    --------->ATERF1(1)                                                                   --------->At4g35610                                                                   ------>NtERF2                                                                   <---------DEAR4(2)                                                                   <---------RAP2.3(1)                                                                   --------->ABI4(1)                                                                   <---------ATERF1(1)                                                                   <---------At4g35610                                                                  --------->RAP2.3(3)                                                                  --------->DEAR3(1)                                                                  <---------DEAR3(1)                                                                  --------->RAP2.3(2)                                                                  --------->ATERF1(2)                                                                  <---------ATERF1(2)                                                                 --------->DEAR4(2)                                                                 --------->RAP2.6(1)                                                                 --------->RRTF1(1)                                                                 --------->RAP2.3(1)                                                                 --------->ORA47(2)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                <---------RAP2.3(1)                                                               <---------DEAR3(1)                                                               --------->DEAR3(1)                                                              --------->ATERF1(1)                                                             <---------ATERF1(1)                                                             <-----------HVH21                                                            --------->ANAC46                                                          <------NtERF2--------->DEAR4(2)                                                         ------>NtERF2------>NtERF2                                                        --------->ETT(2)--------->RAP2.3(2)                                                        --------->DEAR3(1) <---------ALFIN1                                                        <---------ETT(2)--------->RRTF1(2)                                                       --------->ATERF1(1)<------NtERF2                                                       <------NtERF2--------->ERF1                                                      <---------ATERF1(1)<---------ATERF1(1)                                                      ------>NtERF2<---------DREB2C(1)                                                      <-----------HVH21--------->ORA47(2)                                                     <---------O2--------->ERF1                                                     <---------ANAC58<---------DEAR3(1)                                                     <---------bZIP60(2)--------->RAP2.6(2)                                                     <---------ATERF1(2)--------->ANAC46                                                     --------->ATERF1(2)--------->ANAC58                         --------->ANAC58            <---------bZIP60(1)--------->RRTF1(3)                --------->AHL20(1)                   --------->DEAR3(1)--------->RRTF1(1)                --------->ARR11(3)                   --------->bZIP60(1)--------->RAP2.3(3)          <---------ATHB12  ---------->DOF2          <---------ANAC58--------->ATERF1(2)     <-------  --------->AHL20(2)     --------->ANAC58            <---------ANAC46--------->RAP2.3(2)    <-------- ------>AHL20(2)<---------AHL20(1)               <---------ZAT14<---------ATERF1(1)  --------->At4g35610 ------AHL20(2) <---------ARR11(3)               --------->ZAT14------>NtERF2<---------ALFIN1<------- ----->AHL20(2)--------->YAB1   *TSS<-----------GT1<---------ZAT18--------->ANAC46 --------->YAB1----   taaataaaacaaatcaaaaatattcactagcaaagtagtaaccagagacactgtgccgtcgcccgtcgccgccgccgccacactatcatctctctcaggt  27845900                                                                      --------->TOE1(3)                                                                    ------->TEIL                                                                --------------->AtSPL8                                                               <---------ANAC46                                                               <------MYB83                                                               <---------ANAC58                                                               <------MYB46(1)               ------>ZmHOX2a(1)                                                               <---------ANAC58             <--------          --------->ANAC46                                    --------->MYB52(2)          ------>ZmHOX2a(1) ===RAV  <---------LBD16                                      <---------DEAR3(1)   <---------DAG2 --TOE1(2)--------->ANAC58                                    <---------MYB46(3) ------>NtERF2      - ---RAV1(2)          <---------HSFB2a(1)                     --------->SPL7      --------->LBD16    - --TOE2(2)--------->ANAC58 <---------GLK1(2)                <---------MYB52(1)  --------->ANAC46  <-- ------------------->TaNAC69(2)   ---------->DOF2          <---------SPL7      <---------LBD16  -----   ttttgattttccacggcaatggagtcttcgattctcaaaagccctaatctctcttcaccatcgttcggtgtaccttcaattcccgccttatcctcctcct  27846000                                                                          --------->ANAC55(2)                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                          <---------ANAC55(2)                                                                      --------->KAN4(2)                                                                     --------->HSFC1(2)                                                                     --------->HSFB2a(1)                                                                     <---------HSFB2a(1)                                                                     <---------HSFC1(2)                                                                  <------NtERF2                                            --------->SPL7       --------->LBD16                                          <---------SPL7        --------->RAP2.3(2)                                        --------------->AtSPL8  --------->LBD16                                        --------------->AtSPL3  --------->RAP2.6(2)                                       --------->MYB52(1)      <---------LBD16                                      <---------ALFIN1        --------->ABI4(1)     <---------ARR14(2)                                     --------->MYB46(3)       ------>NtERF2         --------->ARR14(2)                                     <---------ABI4(2)       ------->GAMYB<---------ANAC55(1) --------->AtMYB61                   <---------MYB55(2)      --------->DREB2C(2) <---------ANAC55(2) <---------ALFIN1                  --------->ARR14(2)        --------->DEAR3(1)  <---------ANAC46 -ALFIN1                           <---------ARR14(2)        <---------ALFIN1    --------->ANAC55(2) -------->ANAC46             <------ZmHOX2a(2)            <---------ALFIN1<---------ANAC46 -------->bZIP60(2)         <-----------HVH21             --------->AtMYB61  <-----------HVH21 -------ALFIN1        <---------At4g35610--------->DEAR3(1) --------->MYB46(3) <---------ANAC46 ->ZmHOX2a(1) <---------CCA1(2) --------->ANAC46         --------->MYB46(3)--------->LBD16     <-----   ccacctcaccattttcatctcttcatctccgatcacagaaccaccgtaccatctctcttaccaccgccggaaaattccgtgtctcgtattctctctccgc  27846100  Previous    Next  AGI:  At1g74030.1    Description:  enolase, putative. similar to LOS2 (Low expression of osmotically responsive genes 1), phosphopyruvate hydratase [Arabidopsis thaliana] (TAIR:AT2G36530.1); similar to hypothetical protein OsI_030111 [Oryza sativa (indica cultivar-group)] (GB:EAZ08879.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69744.1); similar to plastid enolase [Helianthus annuus] (GB:ABO36543.1); contains InterPro domain Enolase; (InterPro:IPR000941) Range:  from: 27842845    to: 27845600    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g74040.1    Description:  IMS1; 2-isopropylmalate synthase. Identical to 2-isopropylmalate synthase 2, chloroplast precursor (IPMS2) [Arabidopsis Thaliana] (GB:Q9C550;GB:Q8GWX8); similar to IPMS1/MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT1G18500.1); similar to 2-isopropylmalate synthase A (Alpha-isopropylmalate synthase A) (Alpha-IPM synthetase A) (GB:O04973); similar to 2-isopropylmalate synthase 1 [Brassica insularis] (GB:ABA26446.1); similar to Putative 2-isopropylmalate synthase [Brassica oleracea] (GB:AAW81741.1); contains InterPro domain 2-isopropylmalate synthase LeuA, allosteric (dimerisation) do Range:  from: 27845832    to: 27849437    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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