Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <-----------RAV1(2)                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                      <---------ARR14(2)  <-----------RAV1(2)          <---------AtLEC2           <------ZmHOX2a(1) --------->At4g35610            ------>MYB83         <-------TEIL             <-----------RAV1(2)  <---------At4g35610            ------>MYB46(1) -->TOE2(3)    ------->TEIL  <---------ATHB12<----------DOF2   <-----------HVH21   --------->DEAR3(2)   ataatgcaaaatgcatgaatccatcgtttcaatgactcaggatcaggctttatacttagctcaggcttcacagaaaacgatggagaccgactcatttcaa  27801200                     --------->WOX13(1)                                                             -                 ------>ZmHOX2a(1)                                               <----------DOF2-----        <---------GLK1(2)                                            ---------->DOF2            <----      --------->ANAC58                                          <-------TEIL  ------->TEIL      -----      --------->ANAC58                                    ---------->DOF2    <---------CCA1(2)  <----      --------->ANAC46       --------->TOE2(3)    --------->LBD16--------->REM1(1)   <---------At4g35610   atgtaaccaagaaactctcctatccatcaaacctcatcgtcccttatacttccccaattgaaaagcttcatcaaagtttgaatctttagcttatactaag  27801300              --------->MYB52(2)            <--------P           <-------GAMYB         <---------MYB46(3)        <---------ANAC46      <------MYB46(1)      <------MYB83     <---------AtMYB61     --------->MYB111(1)  <---------GLK1(2)                                                                               ---  <---------ARR14(2)                                                                              ---  --------->ARR14(2)                                                                              <-- ---------->ARR10 <-------TEIL                                                                   ---- ---->ZAT2<------MYB83                                                                 <------ZmHOX2a(2) -----ZAT2<------MYB46(1)    <----------DOF2               ----------->GT1        <---------MYB52(1)- ---->At4g35610--------->At4g35610  ------>NtERF2        ---------->DOF2<---------At4g35610     ----- -----At4g35610<---------At4g35610 --------->DEAR3(1)---------->DOF2    --------->At4g35610 <--------   ctcagatttggtgggttagcttcatgaaacactttcgcagcctgaaattgaatcccaaagaaagaaaatttgtaagctcaagacgttagatcaaatcaac  27801400             --------->ZAT2             <---------At4g35610             <---------ZAT2 ------>At4g35610 ------>ZAT2 --------->At4g35610      <---------ALFIN1                                    <---------TOE1(3) -------At4g35610                  <-----------GT1                          <---------ANAC46 --->GAMYB<---------At4g35610     --------->MYB46(3)                        <---------ANAC58 -------->RAP2.6(2)    <---------ANAC58                          <------MYB83<-----------HVH21 ---->MYB46(3)         <---------ANAC58                          <------MYB46(1)          <---------TOE2(3) -ATHB12<-----------GT1<---------ANAC46              --------->YAB1         <---------ANAC58   agcagccattttagcagctccaatgccttgaatcgaatcaccacattgaatacaataagaacagggctggttctgaaggcgtgagagaaattagggtttg  27801500                              <-------MYC3                              <-------MYC2                             --------->ANAC58                             --------->TGA1a                             =============================bZIP_DOF                             --------->O2                             ==========================================MYC_MYB                             <---------O2                             <---------ANAC55(2)                             <---------TGA1a                             --------->ANAC58                             --------->ANAC55(2)                             --------->ANAC46                       <-----------HVH21                      --------->ANAC55(2)                         <---------MYB46(3)                      --------->ANAC55(1)                         <------MYB46(1)                      --------->ANAC58                            ----------->GT1                      --------->ANAC58                            <------MYB83               <-------            --------->ARR11(3)------->MYC3                       <---------DEAR3(1)          --------            <---------ARR11(3)------->MYC2     ---------->DOF2  <---------MYB52(1)        <---------TOE1(2)   <------ZmHOX2a(1)  --------->ANAC46 --------->YAB1          <-------GAMYB      <---------YAB1-----   taagaggagaagaagatgtcttacacgttacacgtgatgaattagaactcaaagtttgggtttttcgttggtgaattttgcattttgattcgaaggaatc  27801600                                                                                    <----------DOF2                                                                              --------->DAG2                                                                              <---------------AtSPL8                                                             --------->AHL20(2)   <-------TEIL                                                       --------->TOE2(3)      --------------->AtSPL8                                             <---------MYB46(3)               --------------->AtSPL3    --------->ANAC58       <-------TEIL      <-----------RAV1(1)      --------->AHL20(1)    --------->ANAC58    --------->ATHB12   --------->At4g35610        --------->AHL20(2)  --------->MYB52(1)    -------->HAHB4     <---------At4g35610        <---------AHL20(2) <-----------GT1 --GLK1(2)             --------->ICU4     --------->MYB52(2)<---------WOX13(1)<---------------AtSPL3 ->ARR14(2)            <---------ATHB12   *TSS <---------MYB52(1)--------->AHL20(2) <---------DAG2 ------>GT1            <---------YAB1   <---------MYB52(1) <------------CBF ---------->DOF2        <-   gcaaaaacggaaggctaactccgaaatgattcatggagcattgttagctgttgtttttcttaattgaataaataaaataaaaggtactttttcacaaatt  27801700                                     ---------->DOF2                                   <---------MYB52(1)                                   --------->DOF5.7(2)    --------->At4g35610                                  <-------GAMYB           <---------At4g35610                               <-----------------AGL1     <-------GAMYB                               <---------At5g28300--------->ATHB12       <---------ICU4                             <---------SPL7   --------->ATHB12      <---------AHL20(2)                            <---------ANAC58  -------->ATHB1     <---------AHL20(1)              <---            ------------>CBF<---------ANAC58  <---------ICU4     --------->AHL20(1)             -----   ------------>CBF --------->ARR11(3)       <---------YAB1      --------->ARR11(3)             <---- --------------AtSPL8 <------------CBF       <---------ATHB12    <---------ARR11(3)            <-----   tttggtacaatttggacaatgtgatattgggcttaccgttaaggcccatcattgattcgcagttgaatattttaaaaattacaaaaatttcaatgtagga  27801800                          <------MYB46(1)                          <------MYB83            --------->ARR11(3)           <---------CCA1(2)                                                       <---------HSFB2a(2)         --------->AHL20(2)                                            --------->HSFB2a(1)     --------->ICU4     <--------P   ----------->GT1                  <---------TOE2(2) ---ZmHOX2a(2)        <---------MYB46(3)                              <---------TOE2(3) ---->ARR11(3)        --------->ATHB12 <---------MYB52(1)        --------->MYB52(1)--------->HSFB2a(2) -----ARR11(3)        --------->MYB55(2)                   ----------->RAV1(1)  <---------YAB1 -ZmHOX2a(1)<---------ARR11(3)<---------At4g35610         --------->ANAC46     <---------ANAC46   ---   tcatttactgattatatctactagtggttggaagatgctctgttaattagttatcccttcacaacacaaacgaaggttgtttcttatagaaatgactcaa  27801900                                                                           <---------ZAT14                                                                      <---------ANAC58                                                                      <---------ANAC55(1)                                                                      <---------ANAC46                                                                 ----------->GT1                                                                 <---------MYB46(3)             <----                                                                 --------->MYB55(2)           <------                                                         <---------YAB1    --------->ZAT14  ------>ZmHOX2a(1)             <---------ARR14(2)                      ----------->GT1  <---------ANAC58  --------->ARR14(2)        ----------->GT1  --------->HSFB2a(2)        --------->DAG2   --------->MYB52(2) <---------ARR14(2)  <------ZmHOX2a(2)      <---------HSFB2a(2)       ---------->DOF2<-------GAMYB    --------->MYB52(1) ------>YAB1 --------->ARR14(2)             <---------ZAT6--------->ICU4   --------->ZAT18------>ZmHOX2a(2)   tgagatcaaattgaaaatatgcaacttccaaaaaaactcgtcgtgagtgttagtaaagtaatattggtggttacttgtgcagaggtaactgatcctcttt  27802000                                     ----------->RAV1(2)                                    ------>ZmHOX2a(1)                          <---------TOE2(3)                     --------->ANAC46                       <------ZmHOX2a(2)            <---------GLK1(2)<---------MYB52(2)                       =======================HOX2a_HOX2a       --------->ANAC58       ---------->DOF2 ====================HOX2a_HOX2a          --------->ANAC58 -----AHL20(2)        --------->ARR11(3)   <----------DOF2  --------->ANAC46 ----DOF2       <-------TEIL <--------P------>ZmHOX2a(1)    --------->REM1(1)   tattgaagggaaaggagtttcatagatcaaggtaagtcctcctgactttctcaagaatttctacaccagcaactaaaaaacgttttctctgagactagaa  27802100  Previous    Next  AGI:  At1g73930.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68016.1); similar to hypothetical protein OsJ_009810 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26327.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70280.1); contains InterPro domain Protein of unknown function DUF1630 (InterPro:IPR012860) Range:  from: 27798781    to: 27801642    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g73940.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49410.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49410.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62865.1) Range:  from: 27801974    to: 27803257    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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