Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ARR14(2)                                                               <-----------------AG                                                          --------->ARR14(2)                       --                   <---------YAB1             ----------->HVH21----------------->AGL1              <-                   --------->ICU4 <---------ANAC58    --------->YAB1             --------->AtMYB61 --             --------->TOE1(2)    <---------ANAC58   <---------ATHB12 <---------LBD16            ----     ----------->GT1--------->ATHB12    --------->ANAC46  <---------ARR14(2)--------->DEAR3(2)   <---   ttcaagaatgtaaaaactgggattattggaagagttgcatacaagtctctgaccaatgaaaatttgcagaattggggaagcgaccatctcgctatcgcat  27788200                                                                     <---------ANAC58                                                                     <---------TGA1a                                                                --------->bZIP60(2)                                                                --------->TGA1a                                                           --------->ANAC46                                                     --------->ZAT14 <---------ANAC58                                                     <---------ZAT14 <---------bZIP60(2)                                                --------->MYB46(3)   <---------O2                                                <---------MYB55(2)----------->HVH21                                                <---------ATHB12<---------TGA1a                                               ===========================MYC_MYB                                               ================================MYC_MYB                                               -------->P  --------->ANAC58                                               ------>MYB46(1)  --------->ZAT2                                               ------>MYB83--------->ANAC58                                              --------->MYB55(1)--------->O2                                             <---------MYB111(1)----------->RAV1(2)                                             <---------MYB111(2)<---------O2        <----------DOF2                      <---------MYB55(2) <---------ZAT2 ------->ZAT14              <----------ID1   <---------MYB46(2) <---------At4g35610 --------ZAT18            <---------ATHB12   --------->MYB46(3) --------->At4g35610 ------->ZAT18   --------->ATHB12            --------->AtMYB61<---------ALFIN1 --->MYC3       <---------ATHB12             --------->DEAR3(1)------>NtERF2        <---------TOE1(3) ----MYC3     --------->WOX13(1)         --------->At4g35610 --------->MYB46(3)     <---------TOE2(3)   gtgaactcggctttgtcaatgactggcaatgagccaaaatgttagcaccaaccactaaaccgagccacctgacttggccatcccttgaggtttttgaatg  27788300                                                                                             <-------                                                                                             <-------                                    ----------->GT1                                      <---------ANAC58                    <---------GLK1(1)      ----------->GT1                          --------->ARR11(1)         --------->At4g35610      <-------TEIL                                      <---------GLK1(2)         <---------At4g35610     --------->GLK1(2)                                  --------->ARR14(2)      --------->HSFC1(2)        <---------ARR14(2)                                ----------->ARR10      <---------HSFC1(2)        <---------GLK1(2)                          <---------------AGL15      --------->HSFB2a(1)       --------->ARR14(2)                    --------->KAN4(2)  <---------ANAC58   ctcatcgaggcttctgaattggagttcggaaacagattcagtaaattgtaaaacataaacaagttttgggctcattcccatacatagatttgcttacttg  27788400                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58                    ------>MYB46(1)                    -------->P                    ------>MYB83                   --------->MYB55(1)                  <---------MYB59                  <---------MYB111(2)                  <---------MYB46(2)                                                        ---------                  <---------MYB111(1)    <----------DOF2                                    ---------             --------->TOE1(3)       ------>MYB83                                         ------->TEIL             <---------MYB59         -------->P           --------->AHL20(2)           --------->ALFIN1             --------->TOE2(3)       ------>MYB46(1)    ----------->GT1              <---------ANAC46    <---------AHL20(2)             <---------MYB111(1) --------->DAG2                <---------ANAC58 --ANAC58    <---------DAG2        <---------MYB46(2) ---------->DOF2                <---------ANAC58 --ANAC58 <-----------GT1        ------->TEIL   <----------DOF2               <-----------GT1      <-   aaacatttttttttaccttacctacccaagacttgcacctactctttctgcttttaaaaagttaataccaaaatagcatgttactggacgtgtacctatg  27788500                                                              ------------>CBF                                                       --------->DAG2                                                      ---------->DOF2                                                 <---------ANAC58                                                 <---------ANAC55(1)                                                 --------->ANAC55(2)        ----------------->AGL3<--                         --------->ANAC58        <---------ANAC46         --------->ANAC46     ------                         --------->ANAC58        ----------->GT1       <---------ZAT14         <-----                     <---------HSFB2a(2)         <---------ANAC58      <---------ZAT18         ------                     --------->HSFB2a(2)         <---------ANAC55(2)   --------->ZAT14         <----- >TOE2(2)         ============================================================================MADS_MADS >TOE1(2)         --------------->AGL15     --------->O2   --------->ARR11(3)         --------->ARR11(3) -----ZmHOX2a(1)  <---------------AGL15     <---------O2   <---------ARR11(3)         <---------ARR11(3)   aggagcgaagacccattttgctactagaagcaaaacaatgtaagagacgttgcgtaaaaagtatctcaatctgttcactccaaaataagctcttctcaag  27788600                                                                                              -------                                                                                             --------                                          *TSS                                               <-------                                ----------->GT1                                         --------->ANAC58    ----------->TGA1           --------->ANAC46                                         --------->ANAC58    ----------->HVH21          --------->ANAC55(1)                                      <------------  <---------At4g35610          --------->ANAC58      --------->ANAC58                  --------->ZAT18  ----------->RAV1(2)        --------->MYB52(1)   <---------SPL7                    <---------ANAC58  --------->At4g35610        <---------ALFIN1    <---------ANAC58                   <---------ANAC46 ---------HVH21            --------->AtMYB61     <---------ANAC58                  <---------------AtSPL8 --->O2                 <-----------GT1   ---------->DOF2                          <---------MYB46(3) ----TGA1a         --------->YAB1       --------->YAB1              <-----------RAV1(1)<-------TEIL --->TGA1a      --------->YAB1 --------->ANAC58  <---------ANAC46   --------->ALFIN1<---------ANAC58 ----O2         --------->WOX13(1)     <---------YAB1--------->ANAC58  <---------ANAC46<---------ZAT14   tgtcatctgacgctgcattaatcaaaataccacacggtattatcaaaagtgtcgtaagcattctttccaagtgttgggaatacattgggtacacaaatcg  27788700                                                              ------>NtERF2                                                              --------->LBD16      <---------ZAT6                                         <---------LBD16    <---------At5g28300                  <----------DOF2     <---------RAP2.6(2) -->RAP2.6(3)                <-----------GT1                <---------LBD16 ->ARR14(2)             --------->AHL20(2)                  --------->RAP2.6(3)           ---------->DOF2 --ARR14(2)             <---------AHL20(2)      <---------ALFIN1             --------->DAG2        <- -----AGL1    --------->ANAC46    <----------DOF2  --------->AtMYB61        ---------->DOF2       ---   gccatttacagttaacacacatctatttaaatcactcttttctctttgctccaccaaaacattccggcataaacaaaaaaaagtcccactagaaaagctc  27788800                                                                          --------->ANAC55(2)                             ------>NtERF2                            <-----------HVH21                             <---------RAP2.6(3)                  <------NtERF2                     <                             ----------->RAV1(1)                 ------>NtERF2                      -                            <---------ETT(1)                   --------->RAP2.3(1)                 <-                            --------->DEAR3(1)                --------->LBD16                      --                            <----------ID1                    ------>NtERF2                        --                            --------->RAP2.6(2)              --------->ANAC46                     <--                           --------->DEAR3(2)                <---------RAP2.3(2)                  ---        --------->ZAT18  --------->ANAC58                   <---------LBD16                       <--   ---------->DOF2       --------->ANAC58                 --------->ARR14(2)            ------>ZmHOX2a(1) <---------YAB1        ---------->DOF2                ----------------->AGL1        <---------ALFIN1- --------ICU4       <----------ID1       <---------CCA1(2)<---------ARR14(2)<---------YAB1        --- ------>ICU4   <------ZmHOX2a(1)---------->DOF2       ----------------->AG<---------ANAC55(2)    ----   attatgaaagtgaacgaggaaaacaacaagccgacaaagacccatgtcttaatcttcccatttccggcgcaaggtcacatgattcccctcctcgacttca  27788900                           <------NtERF2                          ------>NtERF2                         --------->RAP2.6(2)                         --------->RRTF1(3)                         --------->RAP2.3(2)                         --------->DEAR3(1)                         <---------ALFIN1                         --------->RRTF1(2)                         --------->RAP2.3(3)                         --------->DREB2C(2)                        --------->ATERF1(1)                        --------->RAP2.6(1)                        --------->DEAR4(2)                        <------NtERF2                        --------->ERF1                        --------->ORA47(2)                        --------->RRTF1(1)                        --------->RAP2.3(1)                       <---------RAP2.3(1)                       <---------DEAR4(2)                       <---------ERF1                       <---------RRTF1(1)                       --------->ABI4(2)                       <---------ATERF1(1)                       <---------RAP2.6(1)                       ------>NtERF2                       <---------ORA47(2)                      <---------DEAR3(1)                      --------->RAP2.3(2)                      --------->DEAR3(1)                      <---------RAP2.3(2)                     --------->RRTF1(1)                     --------->RAP2.6(1)                     --------->ORA47(2)                     --------->ERF1                     --------->RAP2.3(1)                     <------NtERF2                     --------->ATERF1(1)                     --------->DEAR4(2)                    --------->ABI4(2)                    <---------DEAR3(2)                    <---------RAP2.3(1)                    <---------ATERF1(1)                    <---------DEAR4(2)                    ------>NtERF2                    <---------RRTF1(1)                    <---------ORA47(2)                    <---------ERF1                   <---------RRTF1(2)                   <---------RRTF1(3)                   --------->DEAR3(1)                   <---------DEAR3(1)                   --------->ATERF1(2)                   <---------RAP2.3(3)                  ------>NtERF2                  <------NtERF2                  --------->RAP2.3(1)               --------->At4g35610   ------>NtERF2  <---------ABI4(1)  <---------ALFIN1--------->ATERF1(1)  --------->DEAR3(1)<---------RAP2.6(1)  --------->DREB2C(2)<---------ABI4(2)  ------->GAMYB<---------LBD16 --------->MYB46(3)<---------ATERF1(2) --------->DEAR4(2)<---------RAP2.3(2) ---------ATERF1(1)--------->ALFIN1                --------->ANAC58 ----->MYB83  --------->ANAC46                 <-----------HVH21 --------ALFIN1--------->LBD16               ------>ZmHOX2a(1) ------->ANAC46<---------At4g35610      --------->DEAR3(1) ------->MYB55(1)<---------RAP2.3(1)    ------->GAMYB                  <-----------GT1      --------- -------MYB55(2) ------>NtERF2         --------->MYB46(3)       ------>MYB46(1)            --------->DEAR3(1) ------>MYB46(3)--------->ANAC46       <------------AtMYB77     ------>MYB83             ------>NtERF2 -------MYB111(2)<---------ATERF1(1)  <---------At5g28300    --------->HSFB2a(1)         --------->LBD16 ----->MYB46(1)------>NtERF2         <-----------GT1         <---------HSFB2a(1)        --------->DEAR3(1) ------>DEAR3(1)<---------DEAR3(1)   --------->MYB52(1)    <-----------GT1     <---------At4g35610 ----->ANAC46<---------LBD16      --------->YAB1   --------->ANAC58<----------DOF2      --------->ANAC46   cccaccgccttgctctccgcggcggcgccgccttaaaaataaccgtcctagtcactccaaaaaaccttccttttctctctccgcttctctccgccgtagt  27789000                                                     <------NtERF2                                                    ------>NtERF2                                                   <---------DEAR3(1)                                 <---------ALFIN1  <---------ANAC46                               <---------ALFIN1    --------->DEAR3(1)                               <                              <---------MYB55(2) ------>NtERF2                                     --                     <----------DOF2             <---------ATERF1(1)                          <------                     <---------DAG2            --------->SPL7                 ------>ZmHOX2a(1) -----                    <---------DAG2             <---------LBD16                =======================                 ------>ZmHOX2a(1)           <---------ALFIN1           -------->P           -------- >LBD16--------->MYB46(3)     --------->MYB46(3) --------->LBD16       <-----------GT1    <----------DOF2   taacatcgaaccacttatcctcccttttccctcccacccttcaatcccctccggcgtcgaaaacgtccaagacttacctccttcaggcttccctttaatg  27789100  Previous    Next  AGI:  At1g73875.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18500.2); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ56397.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 27784667    to: 27788581    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g73880.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G51210.1); similar to UDP-glycosyltransferase 89B2 [Stevia rebaudiana] (GB:AAR06921.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 27788642    to: 27790465    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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