Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ----------->GT1         <---------ARR14(2)         --------->ARR11(3)         --------->ARR14(3)         --------->ARR14(2)         <---------ARR11(3)         <---------AGP1                                                                --------->REM1(2)         --------->AGP1<---------ARR11(3)                                             <---------ANAC46         <---------ARR14(3)                                                       <-------GAMYB        --------->RVE1(1) <----------DOF2                                        <---------MYB46(3) -     ---------->DOF2   --------->ARR11(3)                                       <---------AtMYB61   -  <----------DOF2  <---------ICU4                           --------->At4g35610<---------MYB52(1)   < --------ALFIN1   --------->ICU4                       --------->YAB1       <------NtERF2          -- ---->YAB1 ------>ZmHOX2a(2)                           <---------ICU4      ------>NtERF2           <- -----ICU4<------ZmHOX2a(2)            ---------->ID1 --------->ICU4      <---------PCF2      <------   aacactttaaagatcttgtaattaagacctttgaagtaattgtcgtaatgtactgaataatgaactgaaactcttggggccgatggttgtgtagacttgt  27784300          --------->YAB1         <---------YAB1       --------->YAB1  <------NtERF2 --------->ANAC58 <---------ATERF1(1) --------->LBD16                      --------->AHL20(1) <---------RAP2.6(3)                  <---------AHL20(2) --------->ANAC58                     <---------AHL20(1) ------>NtERF2               <---------WOX13(1) -------->ATERF1(2)        --------->ATHB12 -------->RAP2.6(2)      <---------WOX13(1)                                                 --------- ---------ATERF1(2)    --------->ATHB12                                                     --------- ------->ATERF1(1)   <---------WOX13(1)                                                   ---------->DOF2 --------LBD16<---------AHL20(2)      --------->AHL20(2)                     <---------ATHB12    ---- ---REM1(1)  --------->AHL20(2) ----------->GT1                 <----------DOF2    ----------->GT1   agccggcaactatgattttatagattgattgattgagtaatttattgtatatatcaaatgaaaactctttgtttatcaaatgaattggagaaaaaagcca  27784400                 --------->ZAT6              ------->GAMYB             <---------MYB52(2)       <---------YAB1       <-------TEIL                                <----------ID1 >ANAC58--------->YAB1  --------->AHL20(2)                        <---------AHL20(2)    --------->ANAC58 >ANAC58<---------ICU4  <---------AHL20(2)      ---------->DOF2   --------->AHL20(2)    --------->ANAC58 ----->ICU4--------->MYB52(1)             ----------->GT1   ----------->GT1             --------->ANAC46   taatgtgtgataataacgaacactaaaaaattcgtagcgaagacatgttacaaagaaaacaagtgtaattaaaaaaaacaaaaaaaaaacaagaaacaag  27784500                                                  --------->ANAC46                                                  --------->ANAC58                           --------                                         --------->ANAC58                                    --------                                         --------->ANAC58                               ------------>CBF                                     --------->ANAC58                                  --------->ANAC58           --------->ANAC58          --------->ANAC58                                  --------->ANAC46           --------->ANAC46       <---------ATHB12--------->ANAC58                     --------->ANAC58           --------->ANAC58 <-----------GT1     ---------->DOF2    <---------ICU4  <-----------HVH21   ttcaaattagaacatgccatttccaacaatttacaaatgaagcaagaaataaaagccattaaggcctagttatggctgaatagcccatcacacaattaaa  27784600                                        <-----------------AG             --------->DOF5.7(2)                                       ------>MYB83                      <---------MYB52(1)                                       -------->P                 --------->AHL20(2)                                       ------>MYB46(1)            <---------AHL20(2)              <-----------------AG     --------->MYB52(1)      ------->TEIL    ------>MYB46(1)               --------->ANAC58          <---------ANAC55(2)    ------>MYB83                  --------->ANAC58          --------->ANAC55(2)   ----------->RAV1(1)     <---------MYB111(1)         <---------------AtSPL8           ----------->GT1 --------->MYB46(3)   --------->ANAC46--------->MYB52(1)   <-------TEIL --------->TOE2(3) ->AHL20(2)   ============================================MADS_MADS*TSS --------->TOE1(3)           - ->YAB1 ---------->DOF2   XXXXXXXXXXXXXXXXXXX>MIR773B* <---------------AtSPL3  ----------->GT1      -   aaaaccaacataaagagcccaactaggcaactacttaagccaaccggtttgggttatcaagtacgtattttaatcgttaaccagtaaaaatcgtgaattt  27784700                                                    ------>NtERF2                                                   --------->DREB2C(2)                                                   --------->RAP2.3(3)                                                   --------->DEAR3(1)                                                  --------->ATERF1(1)                                                  <------NtERF2                                                  --------->RAP2.3(1)                                                  --------->ORA47(2)                                                 ------>NtERF2                                                 --------->ABI4(1)                                                 <---------ATERF1(1)                                                 --------->At4g35610                                                 <---------At4g35610                                                --------->ATERF1(2)                                                --------->RRTF1(2)                                                --------->RAP2.3(3)                                                --------->RAP2.3(2)                                                <---------DEAR3(1)                                                --------->DEAR3(1)                                                --------->RRTF1(3)                                                <---------ATERF1(2)                                               --------->ERF1                                               --------->ATERF1(1)                                               --------->DEAR4(2)                                               --------->DEAR3(2)                                               <------NtERF2                                               --------->RAP2.3(1)                                               --------->RAP2.6(1)                                               --------->ORA47(2)                                               --------->RRTF1(1)                                              <---------ATERF1(1)                                           --------->TGA1a                                           --------->ANAC58            <------MYB46(1)                <---------TGA1a            <------MYB83                   --------->ANAC46                    <---------------------           --------->MYB59                 --------->ANAC58                   --------->CCA1(2)    <-   ------>MYB83                         ----------->HVH21                    <---------ARR14(2)   ---   ------>MYB46(1)                    <---------At4g35610                --------->At4g35610     <--- --------->DEAR3(1)                   --------->At4g35610                <---------At4g35610    ----- ------->GAMYB                      <---------CCA1(2)            ----------->HVH21            ------- -------->MYB46(3)           --------->WRKY12--------->ANAC46   <---------WOX13(1)            ------- -------->DEAR3(2)           ----------->HVH21------>NtERF2  <---------YAB1  --------->ARR14(2)------   caaccgactgaatttggttaacttcacaaggttgacgcatagctcacgcgccgccgacttgctacgattgacatgagcggatacgagcgtaagaacacga  27784800         <---------ATHB12         --------->MYB46(3)       --------->WOX13(1) <---------ZAT18 --TaNAC69(2) -----NtERF2                                     --------->MYB52(1) --->NtERF2                                    <---------HSFB2a(1) ------DEAR3(1)      ------>MYB83              --------->MYB46(3) ---->RAP2.6(3)      ------>MYB46(1)           --------->KAN4(1)                              ------- -->ANAC46--------->YAB1     ----------->GT1  <---------KAN4(2)      --------->GLK1(1)        ------- ---->HVH21          --------->MYB52(1)  <---------LBD16     --------->ARR14(2)    <------ZmHOX2a(1) --->MYB52(1)--------->AtMYB61  <---------ARR14(2)           <---------ARR14(2)<------ZmHOX2a(1)   <-   cggcgaactcaatcaccatcaccaagcggaagcgtaactcgatttcggaacaatcggagaacgtatacgagaaatcgaataggaaggagtcaataacctt  27784900                                                                                  <---------ANAC46                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                <---------ATERF1(1)                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                               ----------->HVH21                                                                               <---------DEAR3(1)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                              --------->RAP2.3(1)                                                                             <---------RAP2.3(1)                                                                             <---------ATERF1(1)                                                                             --------->LBD16                                                                             ------>NtERF2                                                                            <---------DEAR3(1)                                                                            --------->RAP2.3(2)                                                                            --------->DEAR3(1)                                                                            <---------ATERF1(2)     -                        <---------ARR14(2)                                  --------->ATERF1(2)     -                        --------->ARR14(2)                                 --------->ORA47(2)       <                      <------NtERF2                                        <---------LBD16          <                     ------>NtERF2                                         --------->ERF1           <                     --------->LBD16                                       --------->RAP2.3(1)      -                    --------->LBD16                                        --------->ATERF1(1)      <         <---------MYB52(1)                                               ------>NtERF2           ---  --------->AtMYB61 <---------LBD16                                       --------->LBD16     <------ZmHOX2a(1) -->TOE1(3)        <---------LBD16   --------->ATHB12                     <---------ATERF1(1) ======= -->TOE2(3) <----------DOF2         <---------YAB1                       --------->ANAC46     ======= ----------GT1   --------->ANAC46<------NtERF2   <-----------HVH21       --------->DEAR3(1) <--------   aaaacctcaccgttcttttacgccgggattcagccagcgtgattgtaaacctgtcagacatagtaagtcttctctccgccggcgacggagaactaaggag  27785000              --------->WRKY38(1)             <---------MYB52(1)            <-------GAMYB           <---------ANAC58           <---------ANAC58        --------->ARR14(2)       <---------GLK1(1)  ------>ZmHOX2a(2) <------ZmHOX2a(2) -------->ARR14(3) -------->ARR14(2) ---------AGP1--------->WRKY12 ---------ARR11(3) ---------ARR14(3)                     --------->ANAC58                       <---------ATHB12 -------->ARR11(3)                     --------->ANAC58              --------->ZAT18 ---------ARR14(2)                  --------->LBD16          <---------ARR14(2) -------->ARR10                    --------->ANAC46          --------->ARR14(2)--------->YAB1 ========HOX2a_HOX2a      <---------ANAC58          --------->ARR11(3)      --------->WOX13(1)------- =======HOX2a_HOX2a       <---------ANAC58          <---------ARR11(3)<---------AtLEC2      <-------- -TOE2(3)  <---------ANAC46       <---------LBD16   --------->GLK1(2)<---------ZAT14        ---------   aagatctcgagttccgttgagcgcgaatgggtgttttccgcaaacaattttgaaaatctagcaggtctgtgtgcattgcaatcacactgaataatgcact  27785100                                      <----------DOF2                                 <---------ANAC55(2)                                 --------->ANAC55(2)                                 <---------ANAC46                                 <---------ANAC58    <----------DOF2              <---------ANAC58                                   <----------DOF2 >TEIL                    <-----------GT1                                     <---------ARR11(3) -ZAT18           --------->ANAC46--------->LBD16   <-----------GT1           --------->ARR11(3) >ZAT18     --------->At4g35610 --------------->AtSPL3     <---------ANAC46  <---------GLK1(1)   tatatgcttttattagcttcacgaagtatcacattccgtactttgaacacatttttatcttatgtgtatgaaaaacttgatatctccttttcaattcttc  27785200  Previous    Next  AGI:  At1g73870.1    Description:  zinc finger (B-box type) family protein. Identical to Zinc finger protein CONSTANS-LIKE 7 (COL7) [Arabidopsis Thaliana] (GB:Q9C9A9;GB:Q5XF76); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT1G25440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42139.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 27782827    to: 27784337    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g73875.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18500.2); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ56397.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 27784667    to: 27788581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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