Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->YAB1 ---------ATHB12 ------>WOX13(1) -----YAB1                     <---------DAG2 --->TOE2(3)                   <----------DOF2 -->YAB1         --------->AHL20(2)                                 --------->At5g28300            <- --YAB1 <---------YAB1   --------->AtLEC2                  --------->ZAT6                      <----- -ARR11(3)       <---------AHL20(1)                 ----------->GT1----------->GT1         --------->MYB46(3) >ARR11(3)       --------->AHL20(1)             ---------->DOF2 --------->MYB52(1)  ----------->GT1--   caatcaaactattcttgaatataatccatacaactttttattcttcttaccaaagtgtttaatactaaacggtaaaataactaaaactgtataaccaatg  27763200                                     --------->YAB1                                    <---------YAB1            <------MYB83<---------YAB1                            <---------------AtSPL3            <---------MYB46(3) --------->TOE2(3)       <---------ATHB12                     <------MYB46(1)                       - --------->TOE1(3)      --------->ANAC58                    <---------MYB52(1)                     -- --------ARR11(3)       --------->ANAC58  <------ZmHOX2a(1)<-------GAMYB--------->YAB1        ------- ----ATHB12 ---------->DOF2 --------------->AtSPL8        <---------MYB46(3)               ---------- ------->ARR11(3)      --------->WOX13(1)<---------YAB1   --------->MYB52(2)            >>>>>>>>>TBF1   aaatcttaaatccatatagcaaatgcaatcaatgtacgataataggattggattactcgctcgttggtcacaaatcacaatagactagaagaagaaagca  27763300                                                --------------->AtSPL3      --------->ZAT18                           --------------->AtSPL8    ---------->DOF2        ---- --------->DAG2                     <------ZmHOX2a(1)                   <---------YAB1         <----- -------->DAG2      <---------AHL20(2)          <---------------AtSPL8--------->YAB1           <----- -------->DOF2      --------->AHL20(1) <---------ARR11(3)            --------->ICU4            ------ -->At4g35610       --------->AHL20(2) --------->ARR11(3)            <---------ATHB51<---------ANAC58 >DOF2--------->At4g35610  <----------DOF2      <---------------AtSPL3<---------ICU4 <---------ANAC58   gaaaagggagcaccaattgaaataaaatactttgttgaggaggtcttaagtaagtacttcccccttgagaaataatgaaagaagtttgcttaaacagtgc  27763400                        <---------ZAT18               ------>MYB83--------->O2               ------>MYB46(1)<-----------------AGL2               --------->MYB52(1)              --------->MYB55(1)             --------->AtMYB61<-----------------AG                    ------>MYB46(1)             <---------MYB59  <-----------------AGL3        <---------ANAC55(1)             <---------MYB111(2)                            <---------YAB1       --------->LBD16--------->PCF2              --------->LBD16     ------>MYB83      <---------RAP2.6(2)<---------ALFIN1         ------>ZmHOX2a(1)  <---------ALFIN1     <---------LBD16--------->WRKY12            ----------->RAV1(2) --------->MYB46(3)     --------->SPL7 --------->WRKY38(1)     <---------ARR11(3)    --------->PCF2 ----->ZAT18 <---------MYB46(2)             --------->ARR11(3)  ----------->HVH21 ----ZAT18   <---------MYB111(1)           <---------CCA1(2)<---------ANAC46 ----ZAT14   --------->MYB46(3)<---------------AGL15  --------->AHL20(2)                  <---------CCA1(2) --->ZAT14   <---------MYB55(2)--------------->AGL15  <---------AHL20(2)   ------>ZmHOX2a(1)        <   tcactggtccggctaccaaacgttggcccacttctctatttggatatatctcctgataaattatgtgtgacccactcctatacaaaaatcccataactct  27763500                                                                              <---------YAB1                                                                              --------->ICU4                                                                            --------->YAB1                                                 <---------DAG2           --------->AHL20(1)                                              <---------ALFIN1            --------->AHL20(2)                        <-----------GT1     ------->GAMYB     <---------AHL20(2)               <----------DOF2             --------->ANAC46  <---------AHL20(1)   --------->YAB1           <---------ALFIN1         <---------YAB1           --------->AHL20(2)<---------ICU4   --------->ATHB12 <---------AHL20(2)   <-----------GT1------------>CBF --------->YAB1  <---------YAB1   <---------AHL20(2)  <---------WOX13(1)    <---------AHL20(2)--------->YAB1 ----------DOF2<---------DAG2   <----------DOF2  <----------DOF2       --------->AHL20(2)          --   cactttcattggccctccttttttattttctcatctttttgattaaccccacttttattccaatttttttcaaaaaaataataataagaaaactctagtc  27763600                                                                                                   <-                                                                                           ------->TEIL                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(1)                                                                                           <---------                                                                                           --------->GLK1(2)                                                                                           <---------ARR14(2)        <------------CBF            *TSS                                                  <---------ARR14(1)       <---------ICU4             <----------DOF2                                         <---------CCA1(2)   <---------AHL20(2)--------->ANAC58                             --------->YAB1          <XXXXXXXXXX ----------->TBP     --------->ANAC58       <-----------GT1      --------->AHL20(2)     <---------ANAC58 --------->TBP <---------ALFIN1<---------ALFIN1              --------->AHL20(2)         <---------ANAC58   tatatataaacattgccactcgctcgaaaacagccactttctattttcaccaattttcaaaaaaaaaataaaaattgaaactcagaaatggcgaatctct  27763700                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->ANAC46                                                          <---------ALFIN1                 <---------                                                        ----------->RAV1(1)   <---------ICU4 <---------YAB1                                 <-----------ARR10            <---------ATHB12 --------At4g35610                              --------->ARR14(2)  <---------ICU4      ------>ZmHOX2a(1) --ARR10                                   --------->MYB52(1)    --------->REM1(1)     <---------ALFIN1 XXXXXXXXXXXMIR2933A/B       ------>ZmHOX2a(2)  <---------ARR14(2) <---------YAB1    ------>ZmHOX2a(1)   cttctgattttcagacatttacaatggatgatcccataagacaactagcagaactgagcaacacgcttcatcatttccaaacatttcctcctcctttctc  27763800                                                                                    --------->KAN4(2)                                                       --------->RVE1(1)           <---------HSFB2a(1)                                                      --------->ARR11(3)           <---------KAN4(1)                                                --------->HSFB2a(2)                <----------TaMYB80                                                <---------HSFB2a(2)                --------->GLK1(1)                                                --------->ANAC46                   --------->KAN4(1)                                                --------->LBD16                    <---------GLK1(1)                                               <---------HSFB2a(2)                 --------->HSFB2a(1)                                               <---------LBD16                    --------->ARR14(2)                            <---------ICU4     --------->HSFB2a(2)                <---------KAN4(2)                      --------->YAB1          <---------LBD16--------->HSFB2a(2)  <---------ARR11(3)                   <----------DOF2      <---------ICU4--------->GLK1(2)           <---------ARR14(2)              <----------DOF2     <---------LBD16--------->LBD16--------->YAB1    --------->ARR11(3) -DOF2  <---------GLK1(2)<---------ICU4<---------YAB1 <---------ARR11(3)          ---------->TaMYB80   ttcttctctcgattctcttttctttcataatcaattccctgatcattttcccggaaaatctctcgagaataattttcatcaagggatattcttcccttct  27763900                                                               <---------At4g35610                                                      <---------YAB1                                                     --------->TOE2(3)                                                    <---------ICU4                                                    --------->YAB1                <---------ZAT14                                                    --------->ATHB12        <---------DEAR3(1)                                                   <---------ATHB12       <-----------HVH21                                                   --------->ICU4        --------->ANAC46                                             ----------->GT1   <---------ZAT2 <------NtERF2         --------->MYB52(1)           ===============================================================        <----------ID1                --------------->AGL15    --------->At4g35610--------->ZAT14   aatatccaaaacaacgaagagtcttcttcacaattcgataccaagaagagaaaatcattaatggaagctgtttctacgtcggagaacagtgtctctgatc  27764000                            --------------->AGL15                            <---------------AGL15                            --------->TOE2(3)                           ----------------->AG                           ----------------->AGL3                           ----------------->AGL2                           <-----------------AG                           <-----------------AGL3                           ----------------->AGL1                            --------->TOE2(3)                           <-----------------AGL1                    --------->TOE1(2)                           <-----------------AGL2            --------->AHL20(1)                 <---------At4g35610                         --------->AHL20(2)                 --------->At4g35610         <----------ID1  <---------AHL20(2)              <---------At4g35610  ----------->GT1           <---------AHL20(1)                     < ============================================MADS_MADS    ------->TEIL       --------->TOE1(3)-------   aaactctctctacctcttctgctcaagtttccataaatggaaatatttcgacaaaaaatgtattttattaacctagaaaccctaatttcacacacatata  27764100  Previous    Next  AGI:  At1g73830.1    Description:  BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor. Identical to Protein BEE 3 (BEE3) [Arabidopsis Thaliana] (GB:Q8GWK7;GB:Q9C9S9); similar to BEE1 (BR ENHANCED EXPRESSION 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G18400.1); similar to putative bZIPtranscription factor protein [Brassica oleracea] (GB:AAW81732.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 27763636    to: 27765108    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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