Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------MYB55(2)                                                      --------->MYB46(3)          ----------->HVH21                 ------>ZmHOX2a(2)        --------->ANAC46                   <------ZmHOX2a(2)        --------->ANAC58                  <---------ARR14(3)        --------->ANAC58                  --------->ARR14(3)    --------->ANAC58                      <---------ARR14(2)    --------->ANAC58                      <---------AGP1   ------>NtERF2                          <-----------ARR10 -----GLK1(2)--------->ANAC58             --------->ARR14(2) -----ARR14(2)                            <---------ARR11(3)                                        - ---->ARR14(2)                            --------->ARR11(3)     <---------At4g35610          <<<<<<< -ZmHOX2a(1) --------->ANAC58             --------->AGP1>>>>>>>>>>>>>>>>>LFY               <<<<<<<<<TBF1   atcgctgcgcaagcgacgctactactagtactagcttcgctcaagatcttaatcgaaccaccattgtagctactactacccttgttcttgttcttcttct  27744500                                                                                        --------->ZAT14                                                                                        <---------ZAT18                                                                                        <---------At4g35610                                                                                    --------->ALFIN1                                                                                   <-------GAMYB                                         <------ZmHOX2a(1)                        <---------MYB46(3)                                       --------->ALFIN1                          <---------AtMYB61                                      <------NtERF2                            --------->LBD16                                     --------->LBD16                          <---------ANAC46                                   <---------LBD16                           <-------TEIL     <---------------AGL15         --------->LBD16       <------NtERF2       <---------LBD16     --------------->AGL15         --------->At4g35610  --------->LBD16   --------->At4g35610 --------->ID1                 <---------ARR14(2)       ------>NtERF2     <---------At4g35610 <<TBF1                        --------->ARR14(2)     <---------LBD16    ----------->ARR10 ------>NtERF2   tcgtcttcttaattttgaaattactagcatcccaatccgcggaggagcgaatcactgccgggactgaaacttgctgagatgcggaggttgtgcagcctag  27744600                      <------MYB83                      <---------ANAC58                      <------MYB46(1)                   <---------MYB52(1)                  <-------GAMYB              <---------ARR14(2)                                                 <---------LBD16              <---------MYB52(1)                                                =====================              --------->ARR14(2)                                                <---------bZIP60(2)             <---------SPL7                                                     <---------TGA1a           <------NtERF2                                                        <---------O2          ------>NtERF2                                                         --------->O2         <---------DEAR3(1)                                                   --------->CCA1(2)         --------->ANAC46                                              <---------ARR14(2)         --------->DEAR3(1)                                            --------->ARR14(2)    <-------     --------->DEAR3(2)                                               <------NtERF2     <------MYB83    --------->MYB52(1)<---------ANAC58                              <---------ANAC58    <------MYB46(1) --------->ANAC58<---------ANAC58                  <------ZmHOX2a(1)<---------ANAC46<---------ZAT2 --------->ANAC58<---------ANAC58         <---------HSFB2a(2)       <---------ANAC58--------->ZAT2 --------->ANAC46<---------ANAC46         --------->HSFB2a(2)      <---------LBD16  <------NtERF2   accacgaaacgacgccgttccgttgggtttcttcttagtagtttctggcaagaggaagaaggaagacatggcggatttagagacgcggctaggtttgggg  27744700                --------->ALFIN1               <------NtERF2               <-------GAMYB              <---------MYB46(3)              <---------DEAR3(2)             <---------DEAR3(1)             <---------DREB2C(2)            <---------ABI4(1)            --------->ATERF1(1)            <------NtERF2           <---------RAP2.3(1)           ------>NtERF2           <---------DEAR3(2)           <---------ORA47(2)           <---------ERF1          <---------RAP2.3(3)                                                   <---------MYB46(3)          <---------DREB2C(2)                       <-------GAMYB            <---------MYB46(3)          <---------DEAR3(1)           <---------YAB1                      <---------MYB52(1)          <---------At1g77200      <---------------------WRI1           -------->ZAP1       --------->MYB52(2)        --------->GLK1(1) <---------MYB46(3) <---------WRKY18(1)      <-------TEIL         <---------MYB46(3)  <---------TOE1(2)     --------->WRKY45     <---------ARR14(2) <---------ANAC58--------->HSFC1(2)           --------->WRKY38(1)     --------->ARR14(2) <---------ANAC58--------->HSFB2a(1)          --------->WRKY12 ======================MYC_MYB  --------->ARR11(3) --------->MYB55(2)----------->HVH21 --LBD16<-----------HVH21 --------->ALFIN1    ------>ZmHOX2a(1)   --------->ALFIN1   attagaggttcgtcggcggtggaaatgggtgggagatttcgatgattcctaggtcgttggagtctcatgtgttgaccgattgttgttgaagaagatgaag  27744800          --------->GLK1(2)         --------->ARR14(2)         <---------ARR14(2)     <---------At4g35610                                            *TSS     <---------ZAT14                        ----------->GT1         <------ZmHOX2a(1)             <--     --------->ZAT14               <-----------HVH21  ---------->DOF2                     <------ZmHOX2a(1)     --------->At4g35610  <----------DOF2 ----------->GT1      --------->CCA1(2)      <---------ANAC46   aaggctctgcagaaactggcattgtgttctttttctctgtgagagagagaaaaaacaaaagagagatagaggataatggagacacagggcgaggaagaag  27744900                                                       <---------MYB52(1)                                                       --------->DOF5.7(2)                                                      --------->TOE2(3)                                                      --------->TOE1(3)                                                <---------ICU4                                                <---------------AtSPL3                                                --------------->AtSPL8                                                <---------------AtSPL8                                               --------->ICU4                                            --------->AHL20(2)            <----------DOF2                                       <---------AHL20(2)                 <---------DAG2                                   --------------->AGL15               <-----------GT1    ---------->DOF2                <---------------AGL15 <---------DOF5.7(2)  ----------->HVH21          <---------ZAT6 <---------AHL20(2)  --------->YAB1 ------P   <----------DOF2 ----------->GT1--------->ANAC55(2)  <---------ATHB12                    --   gtaagtgaaagggctttcttaagttggattagtgaaactaatttaagtaattagtacgttaactaatcaaattctactttttcatttattctctagtttg  27745000                           <---------RVE1(1)                           <---------CCA1(1)                          --------->ARR11(3)                    ------>MYB46(1)                    ------>MYB83                  <---------MYB59               <-----------GT1             <---------MYB52(2)            --------->ANAC55(1)           <-----------HVH21                 <----------DOF2            --------->ANAC58             --------->bZIP60(2)             <-----------GT1            --------->ANAC58             --------->ANAC46            <---------ANAC46            --------->ANAC46   <---------AHL20(2)                  ----------->GT1         <---------REM1(2)<---------ARR11(3)                      <---------AtMYB61 --------------------->TaNAC69(2) <----------DOF2               --------->ALFIN1 <----------DOF2<----   tgtttgaagtctacaagtaaccaaattagatattttctttcacatgtcacatactcacatgtaaatgtgtggtttatactttactttagagttttaggct  27745100                                                            --------->YAB1                                             --------->ANAC55(2)                 --------->REM1(2)                                             <---------ANAC55(2) <---------GLK1(2)   <---------ZAT6     <-----------RAV1(1)            <---------ZAT6         <---------YAB1     <----------DOF2 ------DOF2  <---------YAB1         ----------->GT1  ---------->ID1        <---------MYB52(1)       <   tttagcactgttgctatgtttgaaattttgagatgtgagtgtaaaataggtatttgtagctataatagattctcaccggtctttgtagagttggacccct  27745200                                                                         <-----------------AGL1                                                                       <-------TEIL                                                                <----------DOF2                                  --------->CCA1(2)            <---------ANAC58                                 --------->ARR14(2)      --------->AHL20(2)                     --------->YAB1                      <---------AHL20(2)           <-----------GT1       <---------ARR11(3)      --------->AHL20(1)<---------DAG2       <-----------GT1---------->DOF2                   --------->AHL20(2) <----------DOF2 ---------MYB52(1)------>ZmHOX2a(1)          --------->AHL20(2)<---------ANAC58                     -   ctgtttttttttcttacttcctatcaaagtatcaagatttgacttgattaaaaaaaaaaaaaattgctttgggttcacttttttggtcagaaacgaagat  27745300                        <---------ANAC58                   =======================================bZIP_DOF            <---------AHL20(2)           <---------YAB1        <---------RVE1(1)        <---------CCA1(1)                       <---------O2       <---------ARR14(2)                       --------->O2<-----------GT1<-----------HVH21       --------->ARR11(3)                       ===================================bZIP_DOF       <---------ARR11(3)             ====================bZIP_DOF   <-----------GT1       --------->ARR14(2)     --------->AHL20(2)==========================bZIP_DOF                 <-      <------ZmHOX2a(1) <---------ANAC58        --------->TGA1a<---------DAG2                      --    <---------TOE2(3)   <---------AtLEC2        <---------TGA1a<----------DOF2                    <--    <---------TOE1(3)   <---------ANAC46        ====================bZIP_DOF                   <----- -------->CCA1(2)  <----------DOF2    ---------->DOF2    <----------DOF2<----------DOF2       <------   agatttgaggatatttattgtcttttgcttgtataaatagaaaagctctcatgtgtcaacttttacttttttttctttgtcagaggtatttcaattttta  27745400  Previous    Next  AGI:  At1g73760.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G17970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68110.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 27742829    to: 27744868    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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